RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 OR11L1Q8NGX0 322 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 LIPHQ8WWY8 451 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 SPACA5Q96QH8 159 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 OBP2BQ9NPH6 170 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 PSENENQ9NZ42 101 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 SLCO1B1Q9Y6L6 691 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 CXorf65A6NEN9 183 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 RBFOX3A6NFN3 312 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 ASTLQ6HA08 431 aaPredicted RBP9.45□□□□□ -0.9
VCL-201ENST00000211998 OR10P1Q8NGE3 313 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 LCORQ96JN0 433 aaPredicted RBP9.45□□□□□ -0.9
VCL-201ENST00000211998 GSX1Q9H4S2 264 aaPredicted RBP9.45□□□□□ -0.9
VCL-201ENST00000211998 SLC6A13Q9NSD5 602 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 OPN4Q9UHM6 478 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 ANKRD20A5PA0PJZ0 165 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 FCN1O00602 326 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 KLK8O60259 260 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 PRAMEF4O60810 478 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 OR5H8P0DN80 308 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 GALP22466 123 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 OPRM1P35372 400 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 EIF1P41567 113 aaKnown RBP9.45□□□□□ -0.9
VCL-201ENST00000211998 C17orf67Q0P5P2 114 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 CCSMST1Q4G0I0 132 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 FCRL6Q6DN72 434 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 SLC48A1Q6P1K1 146 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 PRSS54Q6PEW0 395 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 RFLNAQ6ZTI6 216 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 SYT13Q7L8C5 426 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 PUSL1Q8N0Z8 303 aaKnown RBP9.45□□□□□ -0.9
VCL-201ENST00000211998 OR10C1Q96KK4 312 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 BARHL1Q9BZE3 327 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 P2RY12Q9H244 342 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 SLC22A13Q9Y226 551 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 IGLV3-10A0A075B6K4 115 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 SERTM2A0A1B0GWG4 89 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 PLPP1O14494 284 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 PLRG1O43660 514 aaKnown RBP9.45□□□□□ -0.9
VCL-201ENST00000211998 NMBP08949 121 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 SLC35E2P0CK97 266 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 SLC25A6P12236 298 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 CHRNA7P36544 502 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 SULT1A2P50226 295 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 DLK1P80370 383 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 OR10A7Q8NGE5 316 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 TEX101Q9BY14 249 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 FBXL17Q9UF56 701 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 CHD4Q14839 1912 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 RGPD2P0DJD1 1756 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 NUP98P52948 1817 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 MFNGO00587 321 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 GPR37O15354 613 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 HCRTR1O43613 425 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 EIF1BO60739 113 aaKnown RBP9.45□□□□□ -0.9
VCL-201ENST00000211998 NPPBP16860 134 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 ERV3-1Q14264 604 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 C19orf43Q9BQ61 176 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 Q9N2K0 584 aa9.45□□□□□ -0.9
VCL-201ENST00000211998 TEX50A0A1B0GTY4 177 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 ZNF17P17021 662 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 RPS27P42677 84 aaKnown RBP9.44□□□□□ -0.9
VCL-201ENST00000211998 AMTP48728 403 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 TMEM176BQ3YBM2 270 aaPredicted RBP9.44□□□□□ -0.9
VCL-201ENST00000211998 FAM78BQ5VT40 261 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 PTCRAQ6ISU1 281 aaPredicted RBP9.44□□□□□ -0.9
VCL-201ENST00000211998 AAED1Q7RTV5 226 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 H2BFWTQ7Z2G1 175 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 GRINAQ7Z429 371 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 DTWD2Q8NBA8 298 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 OR10J5Q8NHC4 309 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 OR51E1Q8TCB6 317 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 MARVELD3Q96A59 401 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 HCSTQ9UBK5 93 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 TNFRSF10CO14798 259 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 RAB29O14966 203 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 TBXA2RP21731 343 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 ZNF813Q6ZN06 617 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 KCND3Q9UK17 655 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 TMEM184BQ9Y519 407 aaPredicted RBP9.44□□□□□ -0.9
VCL-201ENST00000211998 A0A1B0GTQ1 180 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 H3BP45 60 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 SPINK4O60575 86 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 SLCO2B1O94956 709 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 PCBP3P57721 371 aaKnown RBP9.44□□□□□ -0.9
VCL-201ENST00000211998 EGR3Q06889 387 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 TGIF2LXQ8IUE1 241 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 RGP1Q92546 391 aaPredicted RBP9.44□□□□□ -0.9
VCL-201ENST00000211998 ATOH1Q92858 354 aaPredicted RBP9.44□□□□□ -0.9
VCL-201ENST00000211998 CITO14578 2027 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 TMED7-TICAM2A0A0A6YYA0 188 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 LIMS3P0CW19 117 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 LIMS4P0CW20 117 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 CT45A6P0DMU7 189 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 CT45A5P0DMU8 189 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 CT45A7P0DMV0 189 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 CT45A8P0DMV1 189 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 CT45A9P0DMV2 189 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 ARL16Q0P5N6 197 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 CT45A2Q5DJT8 189 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 CT45A1Q5HYN5 189 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms