RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 C11orf87Q6NUJ2 197 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 S100A13Q99584 98 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 DEFB126Q9BYW3 111 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 SDHAF3Q9NRP4 125 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 LSM5Q9Y4Y9 91 aaKnown RBP13.36□□□□□ -0.27
EFNB1-201ENST00000204961 DCHS1Q96JQ0 3298 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 F8W036 122 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 GUSBP08236 651 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 ZNF735P0CB33 412 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 CSRP1P21291 193 aaKnown RBP13.36□□□□□ -0.27
EFNB1-201ENST00000204961 BLOC1S1P78537 153 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 AIMP2Q13155 320 aaKnown RBP13.36□□□□□ -0.27
EFNB1-201ENST00000204961 TMEM244Q5VVB8 128 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 C6orf201Q7Z4U5 140 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 OR8B12Q8NGG6 310 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 OR5D14Q8NGL3 314 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 NUBPLQ8TB37 319 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 ASB10Q8WXI3 467 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 FOXRED1Q96CU9 486 aaPredicted RBP13.36□□□□□ -0.27
EFNB1-201ENST00000204961 REEP6Q96HR9 211 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 C20orf24Q9BUV8 137 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 CHST11Q9NPF2 352 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 PHYHO14832 338 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 CCR5P51681 352 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 ETV3LQ6ZN32 361 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 DTX1Q86Y01 620 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 EID2Q8N6I1 236 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 FN3KRPQ9HA64 309 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 PARPBPQ9NWS1 579 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 PRELID3BQ9Y3B1 194 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 B3GALT1Q9Y5Z6 326 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 FCGR2AP12318 317 aa13.35□□□□□ -0.27
EFNB1-201ENST00000204961 NFYBP25208 207 aa13.35□□□□□ -0.27
EFNB1-201ENST00000204961 MPGP29372 298 aa13.35□□□□□ -0.27
EFNB1-201ENST00000204961 CX3CR1P49238 355 aa13.35□□□□□ -0.27
EFNB1-201ENST00000204961 NOVA1P51513 510 aaKnown RBP13.35□□□□□ -0.27
EFNB1-201ENST00000204961 PNLIPRP2P54317 469 aa13.35□□□□□ -0.27
EFNB1-201ENST00000204961 PLAC9Q5JTB6 97 aa13.35□□□□□ -0.27
EFNB1-201ENST00000204961 APCDD1LQ8NCL9 501 aa13.35□□□□□ -0.27
EFNB1-201ENST00000204961 RRNAD1Q96FB5 475 aaKnown RBP13.35□□□□□ -0.27
EFNB1-201ENST00000204961 TMEM59Q9BXS4 323 aa13.35□□□□□ -0.27
EFNB1-201ENST00000204961 OR51B6Q9H340 312 aa13.35□□□□□ -0.27
EFNB1-201ENST00000204961 OR5AC2Q9NZP5 309 aa13.35□□□□□ -0.27
EFNB1-201ENST00000204961 IGKV3D-11A0A0A0MRZ8 115 aa13.35□□□□□ -0.27
EFNB1-201ENST00000204961 NUDT21O43809 227 aaKnown RBP13.35□□□□□ -0.27
EFNB1-201ENST00000204961 TAF9Q16594 264 aa13.35□□□□□ -0.27
EFNB1-201ENST00000204961 ISXQ2M1V0 245 aa13.35□□□□□ -0.27
EFNB1-201ENST00000204961 TEX30Q5JUR7 227 aa13.35□□□□□ -0.27
EFNB1-201ENST00000204961 OR5M8Q8NGP6 311 aa13.35□□□□□ -0.27
EFNB1-201ENST00000204961 C15orf40Q8WUR7 153 aa13.35□□□□□ -0.27
EFNB1-201ENST00000204961 MRGPRFQ96AM1 343 aa13.35□□□□□ -0.27
EFNB1-201ENST00000204961 SMOC1Q9H4F8 434 aa13.35□□□□□ -0.27
EFNB1-201ENST00000204961 A0A0A6YYD4 124 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 EIF4E2O60573 245 aaKnown RBP13.34□□□□□ -0.27
EFNB1-201ENST00000204961 MT-ATP6P00846 226 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 TMEM225BP0DP42 221 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 PVALBP20472 110 aaPredicted RBP13.34□□□□□ -0.27
EFNB1-201ENST00000204961 CASRP41180 1078 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 SNTB1Q13884 538 aaKnown RBP13.34□□□□□ -0.27
EFNB1-201ENST00000204961 HNF4GQ14541 408 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 DRAM2Q6UX65 266 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 FANCFQ9NPI8 374 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 GPR173Q9NS66 373 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 LHFPL6Q9Y693 200 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 A0A0A6YYH2 397 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 RNF222A6NCQ9 220 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 A6NJ64 397 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 TMEM200CA6NKL6 621 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 BCAT2O15382 392 aaPredicted RBP13.34□□□□□ -0.27
EFNB1-201ENST00000204961 C17orf67Q0P5P2 114 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 ZNF260Q3ZCT1 412 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 JMJD6Q6NYC1 403 aaPredicted RBP13.34□□□□□ -0.27
EFNB1-201ENST00000204961 DNM1P34Q6PK57 102 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 CMSS1Q9BQ75 279 aaKnown RBP13.34□□□□□ -0.27
EFNB1-201ENST00000204961 MMACHCQ9Y4U1 282 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 CFAP47Q6ZTR5 3102 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 SSX5O60225 188 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 GABREP78334 506 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 TGIF1Q15583 401 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 RAB30Q15771 203 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 ZNF574Q6ZN55 896 aaPredicted RBP13.34□□□□□ -0.27
EFNB1-201ENST00000204961 LYG2Q86SG7 212 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 VASH2Q86V25 355 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 TMEM229BQ8NBD8 167 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 DDIT4LQ96D03 193 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 FBXO17Q96EF6 278 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 ZNF160Q9HCG1 818 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 OCIAD1Q9NX40 245 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 PLEK2Q9NYT0 353 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 GLS2Q9UI32 602 aa13.34□□□□□ -0.27
EFNB1-201ENST00000204961 TEX13DA0A0J9YY54 714 aaPredicted RBP13.33□□□□□ -0.28
EFNB1-201ENST00000204961 A0A1W2PR77 199 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 XRCC2O43543 280 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 SLC22A24Q8N4F4 322 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 OR5H2Q8NGV7 314 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 ZNF385AQ96PM9 386 aaKnown RBP13.33□□□□□ -0.28
EFNB1-201ENST00000204961 SCPEP1Q9HB40 452 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 ARHGAP21Q5T5U3 1957 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 NBASA2RRP1 2371 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 FTCDNL1E5RQL4 147 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms