RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 CMC2Q9NRP2 79 aa13.14□□□□□ -0.31
ERCC1-201ENST00000013807 TBC1D23Q9NUY8 699 aa13.14□□□□□ -0.31
ERCC1-201ENST00000013807 C1orf123Q9NWV4 160 aa13.14□□□□□ -0.31
ERCC1-201ENST00000013807 DHRS12A0PJE2 317 aa13.13□□□□□ -0.31
ERCC1-201ENST00000013807 TIPRLO75663 272 aa13.13□□□□□ -0.31
ERCC1-201ENST00000013807 SPARCP09486 303 aa13.13□□□□□ -0.31
ERCC1-201ENST00000013807 ATP6V1B2P21281 511 aa13.13□□□□□ -0.31
ERCC1-201ENST00000013807 TRIM25Q14258 630 aaKnown RBP13.13□□□□□ -0.31
ERCC1-201ENST00000013807 OR8B8Q15620 311 aa13.13□□□□□ -0.31
ERCC1-201ENST00000013807 OR2T5Q6IEZ7 315 aa13.13□□□□□ -0.31
ERCC1-201ENST00000013807 TREML4Q6UXN2 200 aa13.13□□□□□ -0.31
ERCC1-201ENST00000013807 CYP2R1Q6VVX0 501 aa13.13□□□□□ -0.31
ERCC1-201ENST00000013807 ZNF826PQ6ZT77 177 aa13.13□□□□□ -0.31
ERCC1-201ENST00000013807 SPATC1Q76KD6 591 aa13.13□□□□□ -0.31
ERCC1-201ENST00000013807 SLC16A9Q7RTY1 509 aa13.13□□□□□ -0.31
ERCC1-201ENST00000013807 LY6G5BQ8NDX9 201 aa13.13□□□□□ -0.31
ERCC1-201ENST00000013807 OR52H1Q8NGJ2 320 aa13.13□□□□□ -0.31
ERCC1-201ENST00000013807 OR2T29Q8NH02 315 aa13.13□□□□□ -0.31
ERCC1-201ENST00000013807 ZDHHC16Q969W1 377 aa13.13□□□□□ -0.31
ERCC1-201ENST00000013807 SGK3Q96BR1 496 aa13.13□□□□□ -0.31
ERCC1-201ENST00000013807 PCGF1Q9BSM1 259 aa13.13□□□□□ -0.31
ERCC1-201ENST00000013807 TLNRD1Q9H1K6 362 aa13.13□□□□□ -0.31
ERCC1-201ENST00000013807 MMADHCQ9H3L0 296 aaPredicted RBP13.13□□□□□ -0.31
ERCC1-201ENST00000013807 CENPMQ9NSP4 180 aa13.13□□□□□ -0.31
ERCC1-201ENST00000013807 ACOXLQ9NUZ1 547 aa13.13□□□□□ -0.31
ERCC1-201ENST00000013807 KIF17Q9P2E2 1029 aa13.13□□□□□ -0.31
ERCC1-201ENST00000013807 hCG_38984A0A1B0GV85 526 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 ANKRD30BLA7E2S9 258 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 DVL1O14640 695 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 GPR37O15354 613 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 KCNAB3O43448 404 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 IFNGP01579 166 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 GYPBP06028 91 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 GRPP07492 148 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 MELTFP08582 738 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 CLUP10909 449 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 SLC2A1P11166 492 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 CFL1P23528 166 aaKnown RBP13.12□□□□□ -0.31
ERCC1-201ENST00000013807 GRK5P34947 590 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 RELBQ01201 579 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 TAF13Q15543 124 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 METTL11BQ5VVY1 283 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 METAP1DQ6UB28 335 aaPredicted RBP13.12□□□□□ -0.31
ERCC1-201ENST00000013807 BTN2A1Q7KYR7 527 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 KRT74Q7RTS7 529 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 WDR86Q86TI4 376 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 OR4F5Q8NH21 305 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 SSMEM1Q8WWF3 244 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 GATAD2BQ8WXI9 593 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 C12orf43Q96C57 262 aaKnown RBP13.12□□□□□ -0.31
ERCC1-201ENST00000013807 ABHD6Q9BV23 337 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 CHIAQ9BZP6 476 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 CNTD2Q9H8S5 307 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 BEX1Q9HBH7 125 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 VNN3Q9NY84 501 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 C1RLQ9NZP8 487 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 RPUSD1Q9UJJ7 312 aaKnown RBP13.12□□□□□ -0.31
ERCC1-201ENST00000013807 KPTNQ9Y664 436 aa13.12□□□□□ -0.31
ERCC1-201ENST00000013807 IGHV1-69DA0A0B4J2H0 117 aa13.11□□□□□ -0.31
ERCC1-201ENST00000013807 ARRDC5A6NEK1 342 aa13.11□□□□□ -0.31
ERCC1-201ENST00000013807 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.11□□□□□ -0.31
ERCC1-201ENST00000013807 IGHV1-69P01742 117 aa13.11□□□□□ -0.31
ERCC1-201ENST00000013807 GYPAP02724 150 aa13.11□□□□□ -0.31
ERCC1-201ENST00000013807 SNCBQ16143 134 aa13.11□□□□□ -0.31
ERCC1-201ENST00000013807 KLHL12Q53G59 568 aa13.11□□□□□ -0.31
ERCC1-201ENST00000013807 FAM76BQ5HYJ3 339 aa13.11□□□□□ -0.31
ERCC1-201ENST00000013807 ATPAF1Q5TC12 328 aaPredicted RBP13.11□□□□□ -0.31
ERCC1-201ENST00000013807 WDR82Q6UXN9 313 aa13.11□□□□□ -0.31
ERCC1-201ENST00000013807 SHFQ7M4L6 423 aa13.11□□□□□ -0.31
ERCC1-201ENST00000013807 DPY19L4Q7Z388 723 aa13.11□□□□□ -0.31
ERCC1-201ENST00000013807 LDLRAD3Q86YD5 345 aa13.11□□□□□ -0.31
ERCC1-201ENST00000013807 CSNK2A3Q8NEV1 391 aa13.11□□□□□ -0.31
ERCC1-201ENST00000013807 OR1M1Q8NGA1 313 aa13.11□□□□□ -0.31
ERCC1-201ENST00000013807 OR6K6Q8NGW6 343 aa13.11□□□□□ -0.31
ERCC1-201ENST00000013807 WFDC12Q8WWY7 111 aa13.11□□□□□ -0.31
ERCC1-201ENST00000013807 DYRK2Q92630 601 aa13.11□□□□□ -0.31
ERCC1-201ENST00000013807 TAF15Q92804 592 aaKnown RBP eCLIP13.11□□□□□ -0.31
ERCC1-201ENST00000013807 RASSF4Q9H2L5 321 aa13.11□□□□□ -0.31
ERCC1-201ENST00000013807 RGCCQ9H4X1 137 aa13.11□□□□□ -0.31
ERCC1-201ENST00000013807 REEP1Q9H902 201 aa13.11□□□□□ -0.31
ERCC1-201ENST00000013807 ZNF319Q9P2F9 582 aa13.11□□□□□ -0.31
ERCC1-201ENST00000013807 A6NLC8 198 aa13.1□□□□□ -0.31
ERCC1-201ENST00000013807 RIIAD1A6NNX1 92 aa13.1□□□□□ -0.31
ERCC1-201ENST00000013807 GLCEO94923 617 aa13.1□□□□□ -0.31
ERCC1-201ENST00000013807 ZNF3P17036 446 aa13.1□□□□□ -0.31
ERCC1-201ENST00000013807 OMGP23515 440 aa13.1□□□□□ -0.31
ERCC1-201ENST00000013807 OPRL1P41146 370 aa13.1□□□□□ -0.31
ERCC1-201ENST00000013807 TGM4P49221 684 aa13.1□□□□□ -0.31
ERCC1-201ENST00000013807 CX3CR1P49238 355 aa13.1□□□□□ -0.31
ERCC1-201ENST00000013807 GSK3AP49840 483 aa13.1□□□□□ -0.31
ERCC1-201ENST00000013807 RAG2P55895 527 aa13.1□□□□□ -0.31
ERCC1-201ENST00000013807 MS4A2Q01362 244 aa13.1□□□□□ -0.31
ERCC1-201ENST00000013807 PPP1R8Q12972 351 aaKnown RBP13.1□□□□□ -0.31
ERCC1-201ENST00000013807 MICBQ29980 383 aa13.1□□□□□ -0.31
ERCC1-201ENST00000013807 CDONQ4KMG0 1287 aa13.1□□□□□ -0.31
ERCC1-201ENST00000013807 RUSC1-AS1Q66K80 236 aa13.1□□□□□ -0.31
ERCC1-201ENST00000013807 FIP1L1Q6UN15 594 aaKnown RBP13.1□□□□□ -0.31
ERCC1-201ENST00000013807 DHFR2Q86XF0 187 aa13.1□□□□□ -0.31
ERCC1-201ENST00000013807 TIGD4Q8IY51 512 aa13.1□□□□□ -0.31
ERCC1-201ENST00000013807 GALNT4Q8N4A0 578 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms