RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Vmn1r30Q8R2D2 302 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Rfc3Q8R323 356 aaKnown RBP9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Nsa2Q9CR47 260 aaKnown RBP9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Pebp4Q9D9G2 242 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Prr36E9PV26 1098 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 H2-K1P01901 369 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Mcrip1Q3UGS4 97 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Lair1Q8BG84 263 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Prelid1Q8R107 217 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Tmem30aQ8VEK0 364 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Olfr56Q8VGD6 315 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Rpusd4Q9CWX4 377 aaKnown RBP9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 AF067061O70616 171 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Capns1O88456 269 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 IghgP01863 330 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Shox2P70390 331 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 CybaQ61462 192 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Tmem108Q8BHE4 574 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Olfr99Q8VFE4 305 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Nxph3Q91VX5 252 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Acox3Q9EPL9 700 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 C1qtnf3Q9ES30 246 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Cep250Q60952 2414 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Olfr574F8VQ18 346 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Gm4141K9J7H2 306 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Pla2g7Q60963 440 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Sez6Q7TSK2 991 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Mia3Q8BI84 1930 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Megf6Q80V70 1572 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Vmn2r108E9PYS0 855 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Gm21761J3QK00 171 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 GzmfP08883 248 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Ccdc187Q8C5V8 958 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 NotumQ8R116 503 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Usp3Q91W36 520 aaKnown RBP9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Vmn1r137D3YTY1 307 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Vmn1r143E9PUW9 307 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Vmn1r157E9Q069 297 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Vmn1r139E9Q8L6 297 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 4930522L14RikE9QAG4 666 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Vmn1r112G3UY48 297 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Vmn1r135K9J7G0 307 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Vmn1r125L7N227 307 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Vmn1r116L7N2A6 307 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Lrrc28Q3TX51 367 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Clec7aQ6QLQ4 244 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Olfr924Q7TRB8 308 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Cnot2Q8C5L3 540 aaKnown RBP9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Babam2Q8K3W0 383 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Or51e2Q8VBV9 320 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Olfr790Q8VGJ3 322 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Vmn1r100Q9EPS5 307 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Atg2bQ80XK6 2075 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 PpiaP17742 164 aaKnown RBP9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Htr2aP35363 471 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Gcnt2P97402 401 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Siah1bQ06985 282 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Vmn1r237Q8R296 289 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Xylt2Q9EPL0 865 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 SnapinQ9Z266 136 aa9.53□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Olfr69E9Q7C5 316 aa9.52□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Vmn1r159K7N701 305 aa9.52□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Fcgr3P08508 261 aa9.52□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Slc10a2P70172 348 aa9.52□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Phox2aQ62066 280 aa9.52□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Bend7Q8BSV3 434 aa9.52□□□□□ -0.88
Scn9a-201ENSMUST00000100063 MdficQ8BX65 247 aa9.52□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Rnps1Q99M28 305 aaKnown RBP9.52□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Lamtor1Q9CQ22 161 aa9.52□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Lyrm7Q9DA03 104 aa9.52□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Fut2Q9JL27 347 aa9.52□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Cited4Q9WUL8 182 aa9.52□□□□□ -0.88
Scn9a-201ENSMUST00000100063 Olfr1326-ps1A0A140T8J7 311 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 S100a3P62818 101 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 Gm1587Q3UT80 123 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 Trim23Q8BGX0 574 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 Vmn1r48Q9EQ52 302 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 Rpl27P61358 136 aaKnown RBP9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 Thap4Q6P3Z3 569 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 Elmod2Q8BGF6 293 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 F830045P16RikQ8BJ95 487 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 Vmn1r226Q8R2A8 298 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 Dnajc18Q9CZJ9 357 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 Dll4Q9JI71 686 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 Gm3045A0A1D5RMA1 209 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 Mtnd4lP03903 98 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 NrasP08556 189 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 Ctsll3Q3ULP7 331 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 Lyg2Q3V1I0 213 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 Slitrk5Q810B7 957 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 Abhd11Q8K4F5 307 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 Sp7Q8VI67 428 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 Nrip2Q9JHR9 270 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 Akip1Q9JJR5 212 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 Olfr1274-psA0A1L1SQ02 309 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 Cnr2P47936 347 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 Nrsn2Q5HZK2 202 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 Olfr517Q7TRU4 314 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 Olfr506Q7TRU6 314 aa9.52□□□□□ -0.89
Scn9a-201ENSMUST00000100063 H2-M10.3Q85ZW6 330 aa9.52□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms