RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Ramp3Q9WUP1 147 aa20.31■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Fbn2Q61555 2907 aa20.31■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Olfr576A0A0G2JFH3 312 aa20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Mtg2A2AFK4 405 aa20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Olfr1234A2AVK5 314 aa20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Morn1A2RTS7 477 aa20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Olfr547E9PXN3 311 aa20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Gm7970L7N271 213 aa20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Gm7980L7N471 213 aa20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Raet1cO08604 253 aa20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 MamstrQ0ZCJ7 421 aa20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Rrm2bQ6PEE3 351 aa20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 SowahbQ8BZW2 760 aa20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Tma7Q8K003 64 aaKnown RBP20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Pot1Q91WC1 640 aaKnown RBP20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Slc6a19Q9D687 634 aa20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Ch25hQ9Z0F5 298 aa20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Arfgef3Q3UGY8 2170 aa20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Pramef6A2A8M8 474 aa20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Sult2a1P52843 285 aa20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Ap2s1P62743 142 aa20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 St6gal1Q64685 403 aa20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Camk2dQ6PHZ2 499 aa20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Olfr506Q7TRU6 314 aa20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Mogat2Q80W94 334 aa20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Lrfn4Q80XU8 636 aa20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Eif1axQ8BMJ3 144 aaKnown RBP20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 MetrnQ8C1Q4 291 aa20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 NifkQ91VE6 317 aaKnown RBP20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Lamtor1Q9CQ22 161 aa20.3■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Gm28710A0A1B0GR31 962 aa20.29■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Mllt6B1AR10 1109 aa20.29■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Vmn2r29L7N2D4 852 aa20.29■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Slc2a1P17809 492 aa20.29■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Q3KQP7 184 aa20.29■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Mbd6Q3TY92 1003 aa20.29■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Sec14l4Q8R0F9 403 aa20.29■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Olfr446Q8VEV0 308 aa20.29■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Olfr272Q8VGA0 319 aa20.29■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Slc7a12Q8VIE6 465 aa20.29■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Bcdin3dQ91YP1 285 aa20.29■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Olfr642Q924X8 314 aa20.29■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Sntg1Q925E1 517 aa20.29■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Txndc17Q9CQM5 123 aa20.29■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Mrps14Q9CR88 128 aa20.29■□□□□ 0.84
Upf3a-201ENSMUST00000043767 4930503E14RikQ9D583 177 aa20.29■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Q9DAE7 121 aa20.29■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Nox4Q9JHI8 578 aa20.29■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Eif2s3xQ9Z0N1 472 aaKnown RBP20.29■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Akap9Q70FJ1 3797 aa20.29■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Glb1l3A2RSQ1 649 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Gm438B1ASB3 393 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Calhm1D3Z291 348 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 CrygsO35486 178 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Spsb2O88838 264 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Slc12a3P59158 1002 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Nos3P70313 1202 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Csnk2a1Q60737 391 aaKnown RBP20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Cfap161Q6P8Y0 303 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Pik3ip1Q7TMJ8 264 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 D1Ertd622eQ8VEB3 207 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Olfr1484Q8VEU6 315 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Olfr1143Q8VEU8 314 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Olfr768Q8VGC4 312 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Egln3Q91UZ4 239 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Neurl1Q923S6 574 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Dnmt3lQ9CWR8 421 aaKnown RBP20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 GmfgQ9ERL7 142 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Mlf1Q9QWV4 267 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Rasal1Q9Z268 799 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Fkbp2P45878 140 aaKnown RBP20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Klhdc2Q4G5Y1 406 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Nptx1Q62443 432 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 HinfpQ8K1K9 503 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Olfr1277Q8VF41 303 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 PnpoQ91XF0 261 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 2410137M14RikQ9CWF0 162 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Fam3bQ9D309 235 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Tceal6Q9DB24 200 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Arfgap1Q9EPJ9 414 aa20.28■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Olfr1314A2AVL6 312 aa20.27■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Gm572B1ARY8 399 aa20.27■□□□□ 0.84
Upf3a-201ENSMUST00000043767 CymB7ZWD6 379 aa20.27■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Il1r1P13504 576 aa20.27■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Mapk14P47811 360 aa20.27■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Rac3P60764 192 aa20.27■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Yes1Q04736 541 aaKnown RBP20.27■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Atf4Q06507 349 aa20.27■□□□□ 0.84
Upf3a-201ENSMUST00000043767 XkrxQ5GH68 449 aa20.27■□□□□ 0.84
Upf3a-201ENSMUST00000043767 ArhgdigQ62160 225 aa20.27■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Tex261Q62302 196 aa20.27■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Gpr135Q7TQP2 457 aa20.27■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Lrrn3Q8CBC6 707 aa20.27■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Ccm2lQ8VCC6 481 aa20.27■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Znf385aQ8VD12 386 aaKnown RBP20.27■□□□□ 0.84
Upf3a-201ENSMUST00000043767 CmipQ9D486 773 aa20.27■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Lhx2Q9Z0S2 406 aa20.27■□□□□ 0.84
Upf3a-201ENSMUST00000043767 Zfp648D3Z0W3 525 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Kcnj15O88932 375 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 AgrpP56473 131 aa20.26■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms