RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Bhlhe41Q99PV5 410 aa16.81■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Chmp1b2Q9CQD4 199 aa16.81■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Fn3kQ9ER35 309 aa16.81■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Il36aQ9JLA2 160 aa16.81■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 GnmtQ9QXF8 293 aa16.81■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Vmn2r49D3Z6L3 852 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Gm20390E9PZF0 267 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Vmn1r7E9Q8T0 311 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Gm16434J3QN10 205 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 SparcP07214 302 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Hoxa10P31310 416 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Cxcl12P40224 93 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Atp5j2P56135 88 aaKnown RBP16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Casp3P70677 277 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Nme2Q01768 152 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Bloc1s3Q5U5M8 195 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Rasgef1bQ8JZL7 473 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Olfr1501Q8VFQ3 315 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Lrrc26Q91W20 331 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Ear6Q923L7 155 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Tmem42Q9CR22 157 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 1700013G24RikQ9DAC6 286 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Arr3Q9EQP6 381 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 ClnkQ9QZE2 435 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Cav2Q9WVC3 162 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 PthQ9Z0L6 115 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Gm29276A0A087WNW5 222 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Gm20792A0A087WRF5 222 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Gm28490A0A087WRT9 222 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Gm21996A0A087WSS9 222 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Olfr1082A0A1L1SUC9 313 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Gm21767J3QPV5 180 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Psmd4O35226 376 aaKnown RBP16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 P01800 113 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 KitlgP20826 273 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 PnmtP40935 295 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Spc25Q3UA16 226 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Man1c1Q6NXK9 625 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Tmem150cQ8C8S3 249 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Olfr291Q8VF60 317 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Olfr800Q8VFH7 311 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Tram1Q91V04 374 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Med28Q920D3 178 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 CsprsQ99388 208 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 PsphQ99LS3 225 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Ndufb7Q9CR61 137 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Pcbd2Q9CZL5 136 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 MyotQ9JIF9 496 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Anxa10Q9QZ10 324 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Adamts20P59511 1906 aa16.8■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 6330409D20RikA2AK85 162 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Scgb1b30A2BH64 92 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Wisp3D3Z5L9 354 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Olfr585E9PXW4 318 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Gm10881P01642 115 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Ly6aP05533 134 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Selenbp1P17563 472 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Gpr83P30731 423 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 FrzbP97401 323 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Olfr140Q60878 302 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Heatr6Q6P1G0 1184 aaKnown RBP16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Cfap161Q6P8Y0 303 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Olfr1168Q7TR25 312 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Elfn1Q8C8T7 828 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Gfm1Q8K0D5 751 aaKnown RBP16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Tmed4Q8R1V4 227 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Abhd6Q8R2Y0 336 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Olfr351Q8VGK1 310 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Ubl7Q91W67 380 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 NcmapQ99JS0 100 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Cmtm2aQ9DAR1 169 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 CK137956B1AYM9 596 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Klhl9Q6ZPT1 617 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Hs3st3a1Q8BKN6 393 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Mfsd4b1Q8VCV9 425 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Olfr1277Q8VF41 303 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Olfr1424Q8VFV1 313 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Pot1Q91WC1 640 aaKnown RBP16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 PigkQ9CXY9 395 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Lysmd1Q9D0E3 226 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 ShpkQ9D5J6 476 aa16.79■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Tcrg-V5A0A0G2JGV5 113 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Gm12789B1AUV7 164 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 EdaO54693 391 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 H2-Ab1P01921 265 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 P06344 263 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Klf16P58334 251 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Nrsn1P97799 196 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Ces2fQ08ED5 561 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Fahd2Q3TC72 313 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Ptpmt1Q66GT5 193 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Olfr1347Q8VF33 319 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 QprtQ91X91 299 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Letmd1Q924L1 360 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Plxdc2Q9DC11 530 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 LipgQ9WVG5 500 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Ice1E9Q286 2241 aaKnown RBP16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Gm4881A0A140LIR9 352 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Gm34653A0A1L1SR01 368 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Gm21936A0A1Y7VJE9 144 aa16.78■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 44.2 ms