RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 DHPSP49366 369 aaPredicted RBP12.95□□□□□ -0.34
SCARB2-221ENST00000640341 UEVLDQ8IX04 471 aa12.95□□□□□ -0.34
SCARB2-221ENST00000640341 LRRC18Q8N456 261 aa12.95□□□□□ -0.34
SCARB2-221ENST00000640341 LIN37Q96GY3 246 aaPredicted RBP12.95□□□□□ -0.34
SCARB2-221ENST00000640341 ARHGAP5-AS1Q96IT6 56 aa12.95□□□□□ -0.34
SCARB2-221ENST00000640341 HRH4Q9H3N8 390 aa12.95□□□□□ -0.34
SCARB2-221ENST00000640341 FN3KRPQ9HA64 309 aa12.95□□□□□ -0.34
SCARB2-221ENST00000640341 A0A1B0GTI1 187 aa12.95□□□□□ -0.34
SCARB2-221ENST00000640341 ZNF705EA8MWA4 302 aaPredicted RBP12.95□□□□□ -0.34
SCARB2-221ENST00000640341 LDLRAD4O15165 306 aa12.95□□□□□ -0.34
SCARB2-221ENST00000640341 EFSO43281 561 aa12.95□□□□□ -0.34
SCARB2-221ENST00000640341 SRSF10O75494 262 aaKnown RBP12.95□□□□□ -0.34
SCARB2-221ENST00000640341 SNAPC5O75971 98 aa12.95□□□□□ -0.34
SCARB2-221ENST00000640341 TPPPO94811 219 aa12.95□□□□□ -0.34
SCARB2-221ENST00000640341 TIAF1O95411 115 aa12.95□□□□□ -0.34
SCARB2-221ENST00000640341 PSMB6P28072 239 aa12.95□□□□□ -0.34
SCARB2-221ENST00000640341 CALCRP30988 508 aa12.95□□□□□ -0.34
SCARB2-221ENST00000640341 TDGQ13569 410 aa12.95□□□□□ -0.34
SCARB2-221ENST00000640341 C1orf100Q5SVJ3 147 aa12.95□□□□□ -0.34
SCARB2-221ENST00000640341 MITD1Q8WV92 249 aa12.95□□□□□ -0.34
SCARB2-221ENST00000640341 ZNF416Q9BWM5 594 aa12.95□□□□□ -0.34
SCARB2-221ENST00000640341 TMEM59Q9BXS4 323 aa12.95□□□□□ -0.34
SCARB2-221ENST00000640341 PCDHB16Q9NRJ7 776 aa12.95□□□□□ -0.34
SCARB2-221ENST00000640341 GPR27Q9NS67 375 aa12.95□□□□□ -0.34
SCARB2-221ENST00000640341 LHX6Q9UPM6 363 aa12.95□□□□□ -0.34
SCARB2-221ENST00000640341 C5orf63A6NC05 138 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 EFNA2O43921 213 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 OR2J2O76002 312 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 FARS2O95363 451 aaKnown RBP12.94□□□□□ -0.34
SCARB2-221ENST00000640341 GLI4P10075 376 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 AMY2BP19961 511 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 SERPINA2P20848 420 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 MMP16P51512 607 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 SRSF3P84103 164 aaKnown RBP12.94□□□□□ -0.34
SCARB2-221ENST00000640341 CHAF1BQ13112 559 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 GUCA2BQ16661 112 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 TMEM176BQ3YBM2 270 aaPredicted RBP12.94□□□□□ -0.34
SCARB2-221ENST00000640341 MYO7BQ6PIF6 2116 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 CBLN2Q8IUK8 224 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 JSRP1Q96MG2 331 aaPredicted RBP12.94□□□□□ -0.34
SCARB2-221ENST00000640341 PARP12Q9H0J9 701 aaKnown RBP12.94□□□□□ -0.34
SCARB2-221ENST00000640341 MED9Q9NWA0 146 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 SULT2B1O00204 365 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 SSX5O60225 188 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 CD8AP01732 235 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 RAB30Q15771 203 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 ZNF585AQ6P3V2 769 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 MVB12AQ96EY5 273 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 SDHAF3Q9NRP4 125 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 IGHV3-15A0A0B4J1V0 119 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 A0A1W2PR77 199 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 TMEM200CA6NKL6 621 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 ZNF814B7Z6K7 855 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 F8W036 122 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 GP1BAP07359 652 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 LAP3P28838 519 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 BLOC1S1P78537 153 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 PLAC9Q5JTB6 97 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 NKAPLQ5M9Q1 402 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 SYT13Q7L8C5 426 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 APCDD1LQ8NCL9 501 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 OR8B12Q8NGG6 310 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 OR51T1Q8NGJ9 327 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 MARC2Q969Z3 335 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 OR6C1Q96RD1 312 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 AIFM2Q9BRQ8 373 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 FER1L5A0AVI2 2057 aa12.94□□□□□ -0.34
SCARB2-221ENST00000640341 MSGN1A6NI15 193 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 ZNF878C9JN71 531 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 BET1O15155 118 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 ISG15P05161 165 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 PRKACAP17612 351 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 MFSD8Q8NHS3 518 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 EDEM2Q9BV94 578 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 CYB5R1Q9UHQ9 305 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 GLS2Q9UI32 602 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 LHFPL6Q9Y693 200 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 A0A0A6YYD4 124 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 OR6C76A6NM76 312 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 H3BMH7 237 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 DNASE2O00115 360 aaPredicted RBP12.93□□□□□ -0.34
SCARB2-221ENST00000640341 TO15178 435 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 NUDT21O43809 227 aaKnown RBP12.93□□□□□ -0.34
SCARB2-221ENST00000640341 PIAS2O75928 621 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 ZNF43P17038 809 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 GLRA1P23415 457 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 RPL35P42766 123 aaKnown RBP12.93□□□□□ -0.34
SCARB2-221ENST00000640341 CSNK2A1P68400 391 aaPredicted RBP12.93□□□□□ -0.34
SCARB2-221ENST00000640341 PLEKHN1Q494U1 663 aaPredicted RBP12.93□□□□□ -0.34
SCARB2-221ENST00000640341 LCN10Q6JVE6 187 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 MOB3CQ70IA8 216 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 CSNK2A3Q8NEV1 391 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 OR51F2Q8NH61 342 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 RRNAD1Q96FB5 475 aaKnown RBP12.93□□□□□ -0.34
SCARB2-221ENST00000640341 HPF1Q9NWY4 346 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 FAM96BQ9Y3D0 163 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 RHBDD3Q9Y3P4 386 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 ANKUB1A6NFN9 424 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 LIPT2A6NK58 231 aa12.93□□□□□ -0.34
SCARB2-221ENST00000640341 ZNF726A6NNF4 738 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms