RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 C11orf40Q8WZ69 217 aa9.69□□□□□ -0.86
SNIP1-204ENST00000638725 TMEM41AQ96HV5 264 aa9.69□□□□□ -0.86
SNIP1-204ENST00000638725 OR10C1Q96KK4 312 aa9.69□□□□□ -0.86
SNIP1-204ENST00000638725 IFT22Q9H7X7 185 aa9.69□□□□□ -0.86
SNIP1-204ENST00000638725 RHOFQ9HBH0 211 aa9.69□□□□□ -0.86
SNIP1-204ENST00000638725 PIAS3Q9Y6X2 628 aa9.69□□□□□ -0.86
SNIP1-204ENST00000638725 NUDT19A8MXV4 375 aa9.69□□□□□ -0.86
SNIP1-204ENST00000638725 ZNF354AO60765 605 aaPredicted RBP9.69□□□□□ -0.86
SNIP1-204ENST00000638725 RAD51DO75771 328 aa9.69□□□□□ -0.86
SNIP1-204ENST00000638725 SUPT4H1P63272 117 aaKnown RBP9.69□□□□□ -0.86
SNIP1-204ENST00000638725 RAB32Q13637 225 aa9.69□□□□□ -0.86
SNIP1-204ENST00000638725 ANKRD55Q3KP44 614 aa9.69□□□□□ -0.86
SNIP1-204ENST00000638725 AVPI1Q5T686 147 aa9.69□□□□□ -0.86
SNIP1-204ENST00000638725 DRAM2Q6UX65 266 aa9.69□□□□□ -0.86
SNIP1-204ENST00000638725 C16orf47Q6ZP98 133 aaPredicted RBP9.69□□□□□ -0.86
SNIP1-204ENST00000638725 OR5D14Q8NGL3 314 aa9.69□□□□□ -0.86
SNIP1-204ENST00000638725 PHF3Q92576 2039 aaKnown RBP9.69□□□□□ -0.86
SNIP1-204ENST00000638725 CDC6Q99741 560 aa9.69□□□□□ -0.86
SNIP1-204ENST00000638725 ATPIF1Q9UII2 106 aa9.69□□□□□ -0.86
SNIP1-204ENST00000638725 EPOPA6NHQ4 379 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 MBTPS2O43462 519 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 SCGNO76038 276 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 SLC2A1P11166 492 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 ANOS1P23352 680 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 OR3A4PP47883 348 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 DAP3P51398 398 aaKnown RBP9.68□□□□□ -0.86
SNIP1-204ENST00000638725 TMEM50BP56557 158 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 MRPS21P82921 87 aaKnown RBP9.68□□□□□ -0.86
SNIP1-204ENST00000638725 FOXK1P85037 733 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 NSDHLQ15738 373 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 DMRTC1Q5HYR2 192 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 C9orf50Q5SZB4 431 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 KIAA0895LQ68EN5 471 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 OR10H5Q8NGA6 315 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 ADAMTS17Q8TE56 1095 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 RAB3CQ96E17 227 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 NUDT22Q9BRQ3 303 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 DUSP15Q9H1R2 295 aaPredicted RBP9.68□□□□□ -0.86
SNIP1-204ENST00000638725 RAB18Q9NP72 206 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 RCC2Q9P258 522 aaKnown RBP9.68□□□□□ -0.86
SNIP1-204ENST00000638725 MRPS28Q9Y2Q9 187 aaKnown RBP9.68□□□□□ -0.86
SNIP1-204ENST00000638725 SPEGQ15772 3267 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 ADAM10O14672 748 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 TO15178 435 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 HTR3BO95264 441 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 HIST1H1DP16402 221 aaKnown RBP9.68□□□□□ -0.86
SNIP1-204ENST00000638725 ZNF20P17024 532 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 SLC6A9P48067 706 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 FOXL2P58012 376 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 HSF1Q00613 529 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 ZNF529Q6P280 563 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 PGAP1Q75T13 922 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 SLC29A4Q7RTT9 530 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 COMMD2Q86X83 199 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 C1orf147Q96MC9 270 aaPredicted RBP9.68□□□□□ -0.86
SNIP1-204ENST00000638725 C5orf34Q96MH7 638 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 SLC5A7Q9GZV3 580 aa9.68□□□□□ -0.86
SNIP1-204ENST00000638725 MTIF3Q9H2K0 278 aaKnown RBP9.68□□□□□ -0.86
SNIP1-204ENST00000638725 PQLC2LA1A4F0 135 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 TLCD2A6NGC4 264 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 AGPAT2O15120 278 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 LRP3O75074 770 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 RCC1P18754 421 aaPredicted RBP9.67□□□□□ -0.86
SNIP1-204ENST00000638725 NME2P22392 152 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 LPAR6P43657 344 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 FASLGP48023 281 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 GSK3AP49840 483 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 MEOX2P50222 304 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 BLKP51451 505 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 S100A10P60903 97 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 TLE3Q04726 772 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 SMAD2Q15796 467 aaKnown RBP9.67□□□□□ -0.86
SNIP1-204ENST00000638725 VAX1Q5SQQ9 334 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 RPL7L1Q6DKI1 246 aaKnown RBP9.67□□□□□ -0.86
SNIP1-204ENST00000638725 H1FNTQ75WM6 255 aaPredicted RBP9.67□□□□□ -0.86
SNIP1-204ENST00000638725 C7orf61Q8IZ16 206 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 OR5AS1Q8N127 324 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 ZNF775Q96BV0 537 aaPredicted RBP9.67□□□□□ -0.86
SNIP1-204ENST00000638725 KLHDC7BQ96G42 594 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 AQP10Q96PS8 301 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 RTBDNQ9BSG5 229 aaPredicted RBP9.67□□□□□ -0.86
SNIP1-204ENST00000638725 METTL8Q9H825 291 aaKnown RBP9.67□□□□□ -0.86
SNIP1-204ENST00000638725 GPR27Q9NS67 375 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 COPS7AQ9UBW8 275 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 FBLN5Q9UBX5 448 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 ANAPC10Q9UM13 185 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 VDAC3Q9Y277 283 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 C10orf142B7Z368 130 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 SHISA8B8ZZ34 492 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 SDCBPO00560 298 aaPredicted RBP9.67□□□□□ -0.86
SNIP1-204ENST00000638725 CDC14BO60729 498 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 CSTBP04080 98 aaKnown RBP9.67□□□□□ -0.86
SNIP1-204ENST00000638725 SERPINA5P05154 406 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 CHRM2P08172 466 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 LYL1P12980 280 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 DRD1P21728 446 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 CAV2P51636 162 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 BIDP55957 195 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 RBM39Q14498 530 aaKnown RBP9.67□□□□□ -0.86
SNIP1-204ENST00000638725 NAA40Q86UY6 237 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms