RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 OR6C6A6NF89 314 aa14.28□□□□□ -0.12
CLN5-218ENST00000637397 E5RGE8 158 aa14.28□□□□□ -0.12
CLN5-218ENST00000637397 TXNDC12O95881 172 aa14.28□□□□□ -0.12
CLN5-218ENST00000637397 CDAP32320 146 aa14.28□□□□□ -0.12
CLN5-218ENST00000637397 CXCL12P48061 93 aa14.28□□□□□ -0.12
CLN5-218ENST00000637397 ADIRFQ15847 76 aa14.28□□□□□ -0.12
CLN5-218ENST00000637397 RBMS3Q6XE24 437 aaKnown RBP14.28□□□□□ -0.12
CLN5-218ENST00000637397 HIST2H3AQ71DI3 136 aa14.28□□□□□ -0.12
CLN5-218ENST00000637397 GVQW1Q8N7I0 195 aa14.28□□□□□ -0.12
CLN5-218ENST00000637397 BVESQ8NE79 360 aa14.28□□□□□ -0.12
CLN5-218ENST00000637397 TTC9Q92623 222 aa14.28□□□□□ -0.12
CLN5-218ENST00000637397 GPR137Q96N19 417 aa14.28□□□□□ -0.12
CLN5-218ENST00000637397 PLEKHA2Q9HB19 425 aa14.28□□□□□ -0.12
CLN5-218ENST00000637397 TUBG2Q9NRH3 451 aa14.28□□□□□ -0.12
CLN5-218ENST00000637397 NSG2Q9Y328 171 aa14.28□□□□□ -0.12
CLN5-218ENST00000637397 RNASEK-C17orf49H0YIS7 233 aa14.27□□□□□ -0.12
CLN5-218ENST00000637397 HMGB3O15347 200 aaKnown RBP14.27□□□□□ -0.12
CLN5-218ENST00000637397 MPC2O95563 127 aa14.27□□□□□ -0.12
CLN5-218ENST00000637397 PIGPP57054 158 aa14.27□□□□□ -0.12
CLN5-218ENST00000637397 RAB31Q13636 194 aa14.27□□□□□ -0.12
CLN5-218ENST00000637397 RTN4IP1Q8WWV3 396 aaPredicted RBP14.27□□□□□ -0.12
CLN5-218ENST00000637397 ENPP1P22413 925 aa14.27□□□□□ -0.13
CLN5-218ENST00000637397 PSG6Q00889 435 aa14.27□□□□□ -0.13
CLN5-218ENST00000637397 SRSF5Q13243 272 aaKnown RBP14.27□□□□□ -0.13
CLN5-218ENST00000637397 TGIF2Q9GZN2 237 aa14.27□□□□□ -0.13
CLN5-218ENST00000637397 FAM96BQ9Y3D0 163 aa14.27□□□□□ -0.13
CLN5-218ENST00000637397 NRG2O14511 850 aaPredicted RBP14.27□□□□□ -0.13
CLN5-218ENST00000637397 IGF2P01344 180 aa14.27□□□□□ -0.13
CLN5-218ENST00000637397 NAT1P18440 290 aa14.27□□□□□ -0.13
CLN5-218ENST00000637397 PPP1CAP62136 330 aa14.27□□□□□ -0.13
CLN5-218ENST00000637397 PLXDC2Q6UX71 529 aa14.27□□□□□ -0.13
CLN5-218ENST00000637397 ETFBKMTQ8IXQ9 262 aa14.27□□□□□ -0.13
CLN5-218ENST00000637397 ZDHHC22Q8N966 263 aa14.27□□□□□ -0.13
CLN5-218ENST00000637397 OR10AC1Q8NH08 325 aa14.27□□□□□ -0.13
CLN5-218ENST00000637397 NAT6Q93015 286 aa14.27□□□□□ -0.13
CLN5-218ENST00000637397 PLK3Q9H4B4 646 aa14.27□□□□□ -0.13
CLN5-218ENST00000637397 CA10Q9NS85 328 aa14.27□□□□□ -0.13
CLN5-218ENST00000637397 LPAL2Q16609 132 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 SSX9Q7RTT3 188 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 BPHLQ86WA6 291 aaPredicted RBP14.26□□□□□ -0.13
CLN5-218ENST00000637397 OR51F2Q8NH61 342 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 EDAQ92838 391 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 C9orf170A2RU37 121 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 S100A8P05109 93 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 CTLA4P16410 223 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 TBXA2RP21731 343 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 FOXF1Q12946 379 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 TUSC1Q2TAM9 212 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 TMEM268Q5VZI3 342 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 LYSMD4Q5XG99 296 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 ZFP62Q8NB50 900 aaPredicted RBP14.26□□□□□ -0.13
CLN5-218ENST00000637397 ANKRD34CP0C6C1 535 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 TMIGD3P0DMS9 266 aaPredicted RBP14.26□□□□□ -0.13
CLN5-218ENST00000637397 EN2P19622 333 aaPredicted RBP14.26□□□□□ -0.13
CLN5-218ENST00000637397 AADACP22760 399 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 SCAND1P57086 179 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 ZNF239Q16600 458 aaKnown RBP14.26□□□□□ -0.13
CLN5-218ENST00000637397 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.26□□□□□ -0.13
CLN5-218ENST00000637397 UBL7Q96S82 380 aaPredicted RBP14.26□□□□□ -0.13
CLN5-218ENST00000637397 PBX4Q9BYU1 374 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 NOSIPQ9Y314 301 aaKnown RBP14.26□□□□□ -0.13
CLN5-218ENST00000637397 TRAV8-7A0A075B6U6 113 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 SHOXO15266 292 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 SFTA3P0C7M3 94 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 FAHP16930 419 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 PDLIM3Q53GG5 364 aaPredicted RBP14.26□□□□□ -0.13
CLN5-218ENST00000637397 TRILQ7L0X0 811 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 TMEM123Q8N131 208 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 ZNF561Q8N587 486 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 FAM60AQ9NP50 221 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 GAB2Q9UQC2 676 aa14.26□□□□□ -0.13
CLN5-218ENST00000637397 SHISA8B8ZZ34 492 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 GPR31O00270 319 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 TUSC2O75896 110 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 MPZL1O95297 269 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 ETFDHQ16134 617 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 ARHGEF39Q8N4T4 335 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 OR5AP2Q8NGF4 316 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 PIGQQ9BRB3 760 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 LAMTOR5O43504 91 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 PJVKQ0ZLH3 352 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 ZNF141Q15928 474 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 LTC4SQ16873 150 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 OR51A2Q8NGJ7 313 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 OR5M8Q8NGP6 311 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 KIRREL1Q96J84 757 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 SAMD10Q9BYL1 202 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 A8MXE2 369 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 DFFBO76075 338 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 SCGB1D1O95968 90 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 MT-CO2P00403 227 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 CRYBA2P53672 197 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 HTD2P86397 168 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 SP6Q3SY56 376 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 KCNIP4Q6PIL6 250 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 OR5M9Q8NGP3 310 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 MVB12AQ96EY5 273 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 RPP25Q9BUL9 199 aaKnown RBP14.25□□□□□ -0.13
CLN5-218ENST00000637397 MAGT1Q9H0U3 335 aa14.25□□□□□ -0.13
CLN5-218ENST00000637397 PAPPA2Q9BXP8 1791 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms