RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 PLA2G2FQ9BZM2 168 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 CENPMQ9NSP4 180 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 FAM206AQ9NX38 181 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 ALG1L2C9J202 215 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 HOXB2P14652 356 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 AKT2P31751 481 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 GLP1RP43220 463 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 CLDN6P56747 220 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 SUPT4H1P63272 117 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 EBPQ15125 230 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 DEFB115Q30KQ5 88 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 ANKRD55Q3KP44 614 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 TMEM268Q5VZI3 342 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 RBMS3Q6XE24 437 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 AKR1E2Q96JD6 320 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 MAP3K3Q99759 626 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 LPAR5Q9H1C0 372 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 PTGES2Q9H7Z7 377 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 TRAV20A0A0B4J274 112 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 TTRP02766 147 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 HKR1P10072 659 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 ZNF14P17017 642 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 S100A10P60903 97 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 HHEXQ03014 270 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 TDGQ13569 410 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 OPN5Q6U736 354 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 ZNF761Q86XN6 746 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 LINC00346Q8IVM7 164 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 BHLHE23Q8NDY6 225 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 OR51F2Q8NH61 342 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 TCTEX1D2Q8WW35 142 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 ADAT3Q96EY9 351 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 TMEM41AQ96HV5 264 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 RTBDNQ9BSG5 229 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 TBL1XR1Q9BZK7 514 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 RTN4RQ9BZR6 473 aa13.16□□□□□ -0.3
CACNA1A-220ENST00000635988 A0A1W2PQF6 199 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 AGPAT2O15120 278 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 DAP3P51398 398 aaKnown RBP13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 FAM3AP98173 230 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 Q6ZRG5 221 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 GRINAQ7Z429 371 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 LHFPL1Q86WI0 220 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 OR13C9Q8NGT0 318 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 RHBDD1Q8TEB9 315 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 TCTN2Q96GX1 697 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 PNO1Q9NRX1 252 aaKnown RBP13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 GSKIPQ9P0R6 139 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 SRPK3Q9UPE1 567 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 RPH3AQ9Y2J0 694 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 ARHGEF17Q96PE2 2063 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 LINC01553A4QN01 128 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 SOX1O00570 391 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 ZNF217O75362 1048 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 ZNF20P17024 532 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 OR3A2P47893 321 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 TAS2R46P59540 309 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 HGFACQ04756 655 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 FABP9Q0Z7S8 132 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 SURF2Q15527 256 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 PTCRAQ6ISU1 281 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 Q6ZSR6 202 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 TMEM151BQ8IW70 566 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 PRR22Q8IZ63 422 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 ZNF321PQ8N8H1 164 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 OR56B1Q8NGI3 324 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 EMG1Q92979 244 aaKnown RBP13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 ADIPOR1Q96A54 375 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 ZNF775Q96BV0 537 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 NICN1Q9BSH3 213 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 OR8D2Q9GZM6 311 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 PBOV1Q9GZY1 135 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 RGCCQ9H4X1 137 aa13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 MRPS28Q9Y2Q9 187 aaKnown RBP13.15□□□□□ -0.3
CACNA1A-220ENST00000635988 C9JQL5 133 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 NPIPA5E9PKD4 350 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 H0YIG0 161 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 K7EPK0 472 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 CBR1P16152 277 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 COL9A1P20849 921 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 CD1CP29017 333 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 RPL12P30050 165 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 AKIRIN2Q53H80 203 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 FAM71E2Q8N5Q1 922 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 OR2I1PQ8NGU4 316 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 SLC22A8Q8TCC7 542 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 NAA11Q9BSU3 229 aaPredicted RBP13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 CNTNAP3Q9BZ76 1288 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 FAM212BQ9NTI7 297 aaPredicted RBP13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 DZANK1Q9NVP4 752 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 NPIPA1Q9UND3 350 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 STARD10Q9Y365 291 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 MMACHCQ9Y4U1 282 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 LOC101059948A0A1B0GTJ6 334 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 NPIPB13A6NJU9 1138 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 TMEM150CB9EJG8 249 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 NPIPB4C9JG80 1138 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 TSPAN15O95858 294 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 MPIG6BO95866 241 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 AMY2BP19961 511 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms