RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 FAM220AQ7Z4H9 259 aa13.17□□□□□ -0.3
CLN6-211ENST00000635754 ZNF786Q8N393 782 aa13.17□□□□□ -0.3
CLN6-211ENST00000635754 OR8B12Q8NGG6 310 aa13.17□□□□□ -0.3
CLN6-211ENST00000635754 C10orf105Q8TEF2 133 aa13.17□□□□□ -0.3
CLN6-211ENST00000635754 RDH5Q92781 318 aa13.17□□□□□ -0.3
CLN6-211ENST00000635754 SGK3Q96BR1 496 aa13.17□□□□□ -0.3
CLN6-211ENST00000635754 ELMOD3Q96FG2 381 aa13.17□□□□□ -0.3
CLN6-211ENST00000635754 PIMREGQ9BSJ6 248 aa13.17□□□□□ -0.3
CLN6-211ENST00000635754 MOB1AQ9H8S9 216 aa13.17□□□□□ -0.3
CLN6-211ENST00000635754 MRM2Q9UI43 246 aaKnown RBP13.17□□□□□ -0.3
CLN6-211ENST00000635754 ZNF391Q9UJN7 358 aa13.17□□□□□ -0.3
CLN6-211ENST00000635754 GTF2A1LQ9UNN4 478 aa13.17□□□□□ -0.3
CLN6-211ENST00000635754 RRP15Q9Y3B9 282 aaKnown RBP13.17□□□□□ -0.3
CLN6-211ENST00000635754 IGHV4-30-2A0A087WSY4 118 aa13.16□□□□□ -0.3
CLN6-211ENST00000635754 METTL15A6NJ78 407 aa13.16□□□□□ -0.3
CLN6-211ENST00000635754 LOC110117498-PIK3R3F6TDL0 507 aa13.16□□□□□ -0.3
CLN6-211ENST00000635754 J3QRE1 110 aa13.16□□□□□ -0.3
CLN6-211ENST00000635754 SULT1C4O75897 302 aa13.16□□□□□ -0.3
CLN6-211ENST00000635754 CD55P08174 381 aa13.16□□□□□ -0.3
CLN6-211ENST00000635754 SLC25A16P16260 332 aa13.16□□□□□ -0.3
CLN6-211ENST00000635754 MRPS11P82912 194 aaKnown RBP13.16□□□□□ -0.3
CLN6-211ENST00000635754 TNFAIP6P98066 277 aaPredicted RBP13.16□□□□□ -0.3
CLN6-211ENST00000635754 ZNF85Q03923 595 aa13.16□□□□□ -0.3
CLN6-211ENST00000635754 RAB40BQ12829 278 aa13.16□□□□□ -0.3
CLN6-211ENST00000635754 KLHL22Q53GT1 634 aa13.16□□□□□ -0.3
CLN6-211ENST00000635754 ACBD7Q8N6N7 88 aa13.16□□□□□ -0.3
CLN6-211ENST00000635754 OR56B2PQ8NGI1 322 aa13.16□□□□□ -0.3
CLN6-211ENST00000635754 TFAP2CQ92754 450 aa13.16□□□□□ -0.3
CLN6-211ENST00000635754 MRPL48Q96GC5 212 aaKnown RBP13.16□□□□□ -0.3
CLN6-211ENST00000635754 MYCBPQ99417 103 aaPredicted RBP13.16□□□□□ -0.3
CLN6-211ENST00000635754 SLC30A2Q9BRI3 323 aa13.16□□□□□ -0.3
CLN6-211ENST00000635754 TMUB1Q9BVT8 246 aa13.16□□□□□ -0.3
CLN6-211ENST00000635754 TMEM100Q9NV29 134 aa13.16□□□□□ -0.3
CLN6-211ENST00000635754 ZNF319Q9P2F9 582 aa13.16□□□□□ -0.3
CLN6-211ENST00000635754 NUFIP1Q9UHK0 495 aaKnown RBP13.16□□□□□ -0.3
CLN6-211ENST00000635754 NOP16Q9Y3C1 178 aaKnown RBP13.16□□□□□ -0.3
CLN6-211ENST00000635754 R4GMQ9 66 aa13.16□□□□□ -0.3
CLN6-211ENST00000635754 F8P00451 2351 aa13.16□□□□□ -0.3
CLN6-211ENST00000635754 IGHV1-69-2A0A0G2JMI3 117 aa13.15□□□□□ -0.3
CLN6-211ENST00000635754 hCG_38984A0A1B0GV85 526 aa13.15□□□□□ -0.3
CLN6-211ENST00000635754 LYNX1G3V0Z9 82 aa13.15□□□□□ -0.3
CLN6-211ENST00000635754 H7C1Q1 480 aa13.15□□□□□ -0.3
CLN6-211ENST00000635754 LILRA1O75019 489 aa13.15□□□□□ -0.3
CLN6-211ENST00000635754 LYNX1P0DP58 116 aa13.15□□□□□ -0.3
CLN6-211ENST00000635754 ACHEP22303 614 aa13.15□□□□□ -0.3
CLN6-211ENST00000635754 DDOSTP39656 456 aa13.15□□□□□ -0.3
CLN6-211ENST00000635754 FAM3AP98173 230 aa13.15□□□□□ -0.3
CLN6-211ENST00000635754 MFGE8Q08431 387 aaPredicted RBP13.15□□□□□ -0.3
CLN6-211ENST00000635754 SMN1Q16637 294 aaKnown RBP13.15□□□□□ -0.3
CLN6-211ENST00000635754 ZNF684Q5T5D7 378 aa13.15□□□□□ -0.3
CLN6-211ENST00000635754 BCL2L15Q5TBC7 163 aa13.15□□□□□ -0.3
CLN6-211ENST00000635754 OR10AD1Q8NGE0 317 aa13.15□□□□□ -0.3
CLN6-211ENST00000635754 PBOV1Q9GZY1 135 aa13.15□□□□□ -0.3
CLN6-211ENST00000635754 SLC22A4Q9H015 551 aa13.15□□□□□ -0.3
CLN6-211ENST00000635754 CHODLQ9H9P2 273 aa13.15□□□□□ -0.3
CLN6-211ENST00000635754 DLL4Q9NR61 685 aa13.15□□□□□ -0.3
CLN6-211ENST00000635754 MRPS18AQ9NVS2 196 aaKnown RBP13.15□□□□□ -0.3
CLN6-211ENST00000635754 MRPL15Q9P015 296 aaKnown RBP13.15□□□□□ -0.3
CLN6-211ENST00000635754 IL19Q9UHD0 177 aa13.15□□□□□ -0.3
CLN6-211ENST00000635754 GNG8Q9UK08 70 aa13.15□□□□□ -0.3
CLN6-211ENST00000635754 TANC2Q9HCD6 1990 aa13.15□□□□□ -0.3
CLN6-211ENST00000635754 A0A0U1RQV5 110 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 IRGMA1A4Y4 181 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 RNF223E7ERA6 249 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 SRSF10O75494 262 aaKnown RBP13.14□□□□□ -0.31
CLN6-211ENST00000635754 RPP14O95059 124 aaKnown RBP13.14□□□□□ -0.31
CLN6-211ENST00000635754 TACSTD2P09758 323 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 TNFRSF1AP19438 455 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 CRYBB2P43320 205 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 HSPA13P48723 471 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 GSK3AP49840 483 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 ACTA2P62736 377 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 ACTG2P63267 376 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 SNCBQ16143 134 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 TP53I3Q53FA7 332 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 C6orf52Q5T4I8 152 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 LIPNQ5VXI9 398 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 IZUMO2Q6UXV1 221 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 KCTD20Q7Z5Y7 419 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 COMMD2Q86X83 199 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 FTMTQ8N4E7 242 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 ZNF540Q8NDQ6 660 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 C18orf12Q96KH6 178 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 SIGLEC11Q96RL6 698 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 ADAT1Q9BUB4 502 aaKnown RBP13.14□□□□□ -0.31
CLN6-211ENST00000635754 REG4Q9BYZ8 158 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 INPP5EQ9NRR6 644 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 SNX5Q9Y5X3 404 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 VPS13CQ709C8 3753 aa13.14□□□□□ -0.31
CLN6-211ENST00000635754 ANKRD30BLA7E2S9 258 aa13.13□□□□□ -0.31
CLN6-211ENST00000635754 MLNRO43193 412 aa13.13□□□□□ -0.31
CLN6-211ENST00000635754 RRP9O43818 475 aaKnown RBP13.13□□□□□ -0.31
CLN6-211ENST00000635754 CDC14BO60729 498 aa13.13□□□□□ -0.31
CLN6-211ENST00000635754 PNPP00491 289 aa13.13□□□□□ -0.31
CLN6-211ENST00000635754 IGHA1P01876 353 aa13.13□□□□□ -0.31
CLN6-211ENST00000635754 FOSL1P15407 271 aa13.13□□□□□ -0.31
CLN6-211ENST00000635754 CA6P23280 308 aa13.13□□□□□ -0.31
CLN6-211ENST00000635754 COL8A2P25067 703 aa13.13□□□□□ -0.31
CLN6-211ENST00000635754 GIFP27352 417 aa13.13□□□□□ -0.31
CLN6-211ENST00000635754 SRP9P49458 86 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms