RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 HIF1ANQ9NWT6 349 aa13.16□□□□□ -0.3
LINC00339-209ENST00000635450 DNAJC27Q9NZQ0 273 aa13.16□□□□□ -0.3
LINC00339-209ENST00000635450 NOP16Q9Y3C1 178 aaKnown RBP13.16□□□□□ -0.3
LINC00339-209ENST00000635450 TMEM14AQ9Y6G1 99 aa13.16□□□□□ -0.3
LINC00339-209ENST00000635450 TENM1Q9UKZ4 2725 aa13.16□□□□□ -0.3
LINC00339-209ENST00000635450 B4DSR2 109 aa13.15□□□□□ -0.3
LINC00339-209ENST00000635450 MSMBP08118 114 aa13.15□□□□□ -0.3
LINC00339-209ENST00000635450 ALOX5APP20292 161 aa13.15□□□□□ -0.3
LINC00339-209ENST00000635450 THBS2P35442 1172 aa13.15□□□□□ -0.3
LINC00339-209ENST00000635450 SRP9P49458 86 aaKnown RBP13.15□□□□□ -0.3
LINC00339-209ENST00000635450 PRSS12P56730 875 aa13.15□□□□□ -0.3
LINC00339-209ENST00000635450 ZNF121P58317 390 aaPredicted RBP13.15□□□□□ -0.3
LINC00339-209ENST00000635450 EFNB1P98172 346 aa13.15□□□□□ -0.3
LINC00339-209ENST00000635450 ZNF92Q03936 586 aa13.15□□□□□ -0.3
LINC00339-209ENST00000635450 AADACL4Q5VUY2 407 aa13.15□□□□□ -0.3
LINC00339-209ENST00000635450 LRRN1Q6UXK5 716 aa13.15□□□□□ -0.3
LINC00339-209ENST00000635450 C1orf229Q6ZS94 237 aaPredicted RBP13.15□□□□□ -0.3
LINC00339-209ENST00000635450 FAM57BQ71RH2 274 aa13.15□□□□□ -0.3
LINC00339-209ENST00000635450 BCDIN3DQ7Z5W3 292 aaKnown RBP13.15□□□□□ -0.3
LINC00339-209ENST00000635450 GLCCI1Q86VQ1 547 aa13.15□□□□□ -0.3
LINC00339-209ENST00000635450 CBR4Q8N4T8 237 aa13.15□□□□□ -0.3
LINC00339-209ENST00000635450 OR10AD1Q8NGE0 317 aa13.15□□□□□ -0.3
LINC00339-209ENST00000635450 OR52H1Q8NGJ2 320 aa13.15□□□□□ -0.3
LINC00339-209ENST00000635450 OR8J1Q8NGP2 316 aa13.15□□□□□ -0.3
LINC00339-209ENST00000635450 TMEM186Q96B77 213 aa13.15□□□□□ -0.3
LINC00339-209ENST00000635450 PGAM5Q96HS1 289 aa13.15□□□□□ -0.3
LINC00339-209ENST00000635450 OR2V2Q96R30 315 aa13.15□□□□□ -0.3
LINC00339-209ENST00000635450 SLC22A4Q9H015 551 aa13.15□□□□□ -0.3
LINC00339-209ENST00000635450 OR10A2Q9H208 303 aa13.15□□□□□ -0.3
LINC00339-209ENST00000635450 BRD7Q9NPI1 651 aa13.15□□□□□ -0.3
LINC00339-209ENST00000635450 IMPAD1Q9NX62 359 aa13.15□□□□□ -0.3
LINC00339-209ENST00000635450 CD300LBA8K4G0 201 aa13.14□□□□□ -0.31
LINC00339-209ENST00000635450 AVPP01185 164 aa13.14□□□□□ -0.31
LINC00339-209ENST00000635450 CFL1P23528 166 aaKnown RBP13.14□□□□□ -0.31
LINC00339-209ENST00000635450 SRP14P37108 136 aaKnown RBP13.14□□□□□ -0.31
LINC00339-209ENST00000635450 HCCSP53701 268 aa13.14□□□□□ -0.31
LINC00339-209ENST00000635450 ZIK1Q3SY52 487 aaPredicted RBP13.14□□□□□ -0.31
LINC00339-209ENST00000635450 ZBTB49Q6ZSB9 765 aa13.14□□□□□ -0.31
LINC00339-209ENST00000635450 FAM81AQ8TBF8 368 aa13.14□□□□□ -0.31
LINC00339-209ENST00000635450 ASB17Q8WXJ9 295 aa13.14□□□□□ -0.31
LINC00339-209ENST00000635450 EME1Q96AY2 570 aa13.14□□□□□ -0.31
LINC00339-209ENST00000635450 MNTQ99583 582 aa13.14□□□□□ -0.31
LINC00339-209ENST00000635450 MROQ9BYG7 248 aa13.14□□□□□ -0.31
LINC00339-209ENST00000635450 WARS2Q9UGM6 360 aaKnown RBP13.14□□□□□ -0.31
LINC00339-209ENST00000635450 PPP1R3CQ9UQK1 317 aa13.14□□□□□ -0.31
LINC00339-209ENST00000635450 KLHDC2Q9Y2U9 406 aa13.14□□□□□ -0.31
LINC00339-209ENST00000635450 WIPI2Q9Y4P8 454 aa13.14□□□□□ -0.31
LINC00339-209ENST00000635450 H0YL77 283 aa13.13□□□□□ -0.31
LINC00339-209ENST00000635450 PHYHO14832 338 aa13.13□□□□□ -0.31
LINC00339-209ENST00000635450 RGS9O75916 674 aaPredicted RBP13.13□□□□□ -0.31
LINC00339-209ENST00000635450 DDOSTP39656 456 aa13.13□□□□□ -0.31
LINC00339-209ENST00000635450 GFOD2Q3B7J2 385 aa13.13□□□□□ -0.31
LINC00339-209ENST00000635450 DEGS2Q6QHC5 323 aa13.13□□□□□ -0.31
LINC00339-209ENST00000635450 SLC35F2Q8IXU6 374 aa13.13□□□□□ -0.31
LINC00339-209ENST00000635450 TRUB1Q8WWH5 349 aaKnown RBP13.13□□□□□ -0.31
LINC00339-209ENST00000635450 RFKQ969G6 155 aa13.13□□□□□ -0.31
LINC00339-209ENST00000635450 REEP6Q96HR9 211 aa13.13□□□□□ -0.31
LINC00339-209ENST00000635450 MEGF10Q96KG7 1140 aa13.13□□□□□ -0.31
LINC00339-209ENST00000635450 HRASLS5Q96KN8 279 aa13.13□□□□□ -0.31
LINC00339-209ENST00000635450 ZNF665Q9H7R5 613 aa13.13□□□□□ -0.31
LINC00339-209ENST00000635450 TMEM106BQ9NUM4 274 aa13.13□□□□□ -0.31
LINC00339-209ENST00000635450 HAO2Q9NYQ3 351 aa13.13□□□□□ -0.31
LINC00339-209ENST00000635450 IKZF2Q9UKS7 526 aa13.13□□□□□ -0.31
LINC00339-209ENST00000635450 LRP12Q9Y561 859 aa13.13□□□□□ -0.31
LINC00339-209ENST00000635450 ISPDA4D126 451 aa13.12□□□□□ -0.31
LINC00339-209ENST00000635450 C5orf63A6NC05 138 aa13.12□□□□□ -0.31
LINC00339-209ENST00000635450 ZNF670-ZNF695F2Z2N8 137 aa13.12□□□□□ -0.31
LINC00339-209ENST00000635450 F5H5P2 479 aa13.12□□□□□ -0.31
LINC00339-209ENST00000635450 IFNL4K9M1U5 179 aa13.12□□□□□ -0.31
LINC00339-209ENST00000635450 MLNRO43193 412 aa13.12□□□□□ -0.31
LINC00339-209ENST00000635450 ZNF254O75437 659 aa13.12□□□□□ -0.31
LINC00339-209ENST00000635450 HLA-DPB1P04440 258 aa13.12□□□□□ -0.31
LINC00339-209ENST00000635450 ATP6V1E1P36543 226 aa13.12□□□□□ -0.31
LINC00339-209ENST00000635450 RIDAP52758 137 aaKnown RBP13.12□□□□□ -0.31
LINC00339-209ENST00000635450 PSMA6P60900 246 aaKnown RBP13.12□□□□□ -0.31
LINC00339-209ENST00000635450 POU4F2Q12837 409 aa13.12□□□□□ -0.31
LINC00339-209ENST00000635450 TMED1Q13445 227 aa13.12□□□□□ -0.31
LINC00339-209ENST00000635450 OR8G1Q15617 311 aa13.12□□□□□ -0.31
LINC00339-209ENST00000635450 ZSCAN26Q16670 478 aa13.12□□□□□ -0.31
LINC00339-209ENST00000635450 ZNF679Q8IYX0 411 aa13.12□□□□□ -0.31
LINC00339-209ENST00000635450 OR56B2PQ8NGI1 322 aa13.12□□□□□ -0.31
LINC00339-209ENST00000635450 OR51G2Q8NGK0 314 aa13.12□□□□□ -0.31
LINC00339-209ENST00000635450 SPSB4Q96A44 273 aa13.12□□□□□ -0.31
LINC00339-209ENST00000635450 SGK3Q96BR1 496 aa13.12□□□□□ -0.31
LINC00339-209ENST00000635450 RAB39BQ96DA2 213 aa13.12□□□□□ -0.31
LINC00339-209ENST00000635450 RGCCQ9H4X1 137 aa13.12□□□□□ -0.31
LINC00339-209ENST00000635450 METTL17Q9H7H0 456 aaPredicted RBP13.12□□□□□ -0.31
LINC00339-209ENST00000635450 ADGRL4Q9HBW9 690 aa13.12□□□□□ -0.31
LINC00339-209ENST00000635450 GCM1Q9NP62 436 aa13.12□□□□□ -0.31
LINC00339-209ENST00000635450 G6PC2Q9NQR9 355 aa13.12□□□□□ -0.31
LINC00339-209ENST00000635450 MRPL15Q9P015 296 aaKnown RBP13.12□□□□□ -0.31
LINC00339-209ENST00000635450 NPTNQ9Y639 398 aa13.12□□□□□ -0.31
LINC00339-209ENST00000635450 NBEAL1Q6ZS30 2694 aa13.11□□□□□ -0.31
LINC00339-209ENST00000635450 LOC105371242A0A075B767 164 aa13.11□□□□□ -0.31
LINC00339-209ENST00000635450 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.11□□□□□ -0.31
LINC00339-209ENST00000635450 ANKRD30BLA7E2S9 258 aa13.11□□□□□ -0.31
LINC00339-209ENST00000635450 PSMD9O00233 223 aa13.11□□□□□ -0.31
LINC00339-209ENST00000635450 GMDSO60547 372 aa13.11□□□□□ -0.31
LINC00339-209ENST00000635450 IGHV2-5P01817 119 aa13.11□□□□□ -0.31
LINC00339-209ENST00000635450 SBK2P0C263 348 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms