RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 GGT3PA6NGU5 568 aa12.52□□□□□ -0.41
CDC42BPB-209ENST00000634889 PSMD9O00233 223 aa12.52□□□□□ -0.41
CDC42BPB-209ENST00000634889 SULT1C4O75897 302 aa12.52□□□□□ -0.41
CDC42BPB-209ENST00000634889 APOL3O95236 402 aa12.52□□□□□ -0.41
CDC42BPB-209ENST00000634889 KRT8P05787 483 aa12.52□□□□□ -0.41
CDC42BPB-209ENST00000634889 DBTP11182 482 aaKnown RBP12.52□□□□□ -0.41
CDC42BPB-209ENST00000634889 TNFRSF1AP19438 455 aa12.52□□□□□ -0.41
CDC42BPB-209ENST00000634889 TMEM33P57088 247 aa12.52□□□□□ -0.41
CDC42BPB-209ENST00000634889 ADARB1P78563 741 aaKnown RBP12.52□□□□□ -0.41
CDC42BPB-209ENST00000634889 IL5RAQ01344 420 aa12.52□□□□□ -0.41
CDC42BPB-209ENST00000634889 ZNF91Q05481 1191 aa12.52□□□□□ -0.41
CDC42BPB-209ENST00000634889 LOXL1Q08397 574 aaPredicted RBP12.52□□□□□ -0.41
CDC42BPB-209ENST00000634889 SSX6Q7RTT6 188 aa12.52□□□□□ -0.41
CDC42BPB-209ENST00000634889 YIPF5Q969M3 257 aa12.52□□□□□ -0.41
CDC42BPB-209ENST00000634889 SGK3Q96BR1 496 aa12.52□□□□□ -0.41
CDC42BPB-209ENST00000634889 TBX5Q99593 518 aa12.52□□□□□ -0.41
CDC42BPB-209ENST00000634889 ADI1Q9BV57 179 aa12.52□□□□□ -0.41
CDC42BPB-209ENST00000634889 BPESC1Q9GZL8 116 aa12.52□□□□□ -0.41
CDC42BPB-209ENST00000634889 ZNF319Q9P2F9 582 aa12.52□□□□□ -0.41
CDC42BPB-209ENST00000634889 EXOGQ9Y2C4 368 aaKnown RBP12.52□□□□□ -0.41
CDC42BPB-209ENST00000634889 F8P00451 2351 aa12.52□□□□□ -0.41
CDC42BPB-209ENST00000634889 TANC2Q9HCD6 1990 aa12.52□□□□□ -0.41
CDC42BPB-209ENST00000634889 A0A0U1RQV5 110 aa12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 LYNX1G3V0Z9 82 aa12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 H0YJX3 145 aa12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 J3QRE1 110 aa12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 SMAD7O15105 426 aaKnown RBP12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 MLNRO43193 412 aa12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 GMDSO60547 372 aa12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 LILRA1O75019 489 aa12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 SRSF10O75494 262 aaKnown RBP12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 LYNX1P0DP58 116 aa12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 USF1P22415 310 aaPredicted RBP12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 COL8A2P25067 703 aa12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 CAPGP40121 348 aa12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 PRSS12P56730 875 aa12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 FAM3AP98173 230 aa12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 RAB40BQ12829 278 aa12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 SNCBQ16143 134 aa12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 HFEQ30201 348 aa12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 ZNF684Q5T5D7 378 aa12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 KLBQ86Z14 1044 aa12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 OR8B12Q8NGG6 310 aa12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 OR56B2PQ8NGI1 322 aa12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 APH1BQ8WW43 257 aa12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 MYCBPQ99417 103 aaPredicted RBP12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 ZNF275Q9NSD4 429 aaPredicted RBP12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 MRPS18AQ9NVS2 196 aaKnown RBP12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 AASSQ9UDR5 926 aa12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 NUFIP1Q9UHK0 495 aaKnown RBP12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 MRM2Q9UI43 246 aaKnown RBP12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 RPL36Q9Y3U8 105 aaKnown RBP12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 R4GMQ9 66 aa12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 HSPE1-MOB4S4R3N1 261 aa12.51□□□□□ -0.41
CDC42BPB-209ENST00000634889 MED13LQ71F56 2210 aa12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 METTL15A6NJ78 407 aa12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 CDC14BO60729 498 aa12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 WBP4O75554 376 aaKnown RBP12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 CLIC3O95833 236 aa12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 FADS2O95864 444 aaKnown RBP12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 SRP9P49458 86 aaKnown RBP12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 GSK3AP49840 483 aa12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 ZNF85Q03923 595 aa12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 SLC3A1Q07837 685 aa12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 RIPK1Q13546 671 aa12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 OR8B8Q15620 311 aa12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 GFOD2Q3B7J2 385 aa12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 PLEKHG7Q6ZR37 379 aa12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 FTMTQ8N4E7 242 aa12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 ACBD7Q8N6N7 88 aa12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 CELF2-AS1Q8N7Q2 184 aa12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 CSNK2A3Q8NEV1 391 aa12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 OR10AD1Q8NGE0 317 aa12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 NRG4Q8WWG1 115 aa12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 LGALS12Q96DT0 336 aa12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 OR2V2Q96R30 315 aa12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 PBOV1Q9GZY1 135 aa12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 VCX3BQ9H321 246 aa12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 CR1P17927 2039 aa12.5□□□□□ -0.41
CDC42BPB-209ENST00000634889 DAPL1A0PJW8 107 aa12.49□□□□□ -0.41
CDC42BPB-209ENST00000634889 ANKRD30BLA7E2S9 258 aa12.49□□□□□ -0.41
CDC42BPB-209ENST00000634889 CLDN25C9JDP6 229 aa12.49□□□□□ -0.41
CDC42BPB-209ENST00000634889 LOC110117498-PIK3R3F6TDL0 507 aa12.49□□□□□ -0.41
CDC42BPB-209ENST00000634889 IFNL4K9M1U5 179 aa12.49□□□□□ -0.41
CDC42BPB-209ENST00000634889 MAGEB4O15481 346 aaPredicted RBP12.49□□□□□ -0.41
CDC42BPB-209ENST00000634889 PNPP00491 289 aa12.49□□□□□ -0.41
CDC42BPB-209ENST00000634889 TACSTD2P09758 323 aa12.49□□□□□ -0.41
CDC42BPB-209ENST00000634889 CA6P23280 308 aa12.49□□□□□ -0.41
CDC42BPB-209ENST00000634889 GPR6P46095 362 aaPredicted RBP12.49□□□□□ -0.41
CDC42BPB-209ENST00000634889 ISL1P61371 349 aa12.49□□□□□ -0.41
CDC42BPB-209ENST00000634889 ACTA2P62736 377 aa12.49□□□□□ -0.41
CDC42BPB-209ENST00000634889 ACTG2P63267 376 aa12.49□□□□□ -0.41
CDC42BPB-209ENST00000634889 MFGE8Q08431 387 aaPredicted RBP12.49□□□□□ -0.41
CDC42BPB-209ENST00000634889 OR8G1Q15617 311 aa12.49□□□□□ -0.41
CDC42BPB-209ENST00000634889 CDONQ4KMG0 1287 aa12.49□□□□□ -0.41
CDC42BPB-209ENST00000634889 KLHL22Q53GT1 634 aa12.49□□□□□ -0.41
CDC42BPB-209ENST00000634889 BCL2L15Q5TBC7 163 aa12.49□□□□□ -0.41
CDC42BPB-209ENST00000634889 ZNF771Q7L3S4 317 aaPredicted RBP12.49□□□□□ -0.41
CDC42BPB-209ENST00000634889 FAM220AQ7Z4H9 259 aa12.49□□□□□ -0.41
CDC42BPB-209ENST00000634889 KCTD20Q7Z5Y7 419 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms