RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 PTBP3O95758 552 aaKnown RBP12.03□□□□□ -0.48
PNKP-218ENST00000625299 ZNF682O95780 498 aa12.03□□□□□ -0.48
PNKP-218ENST00000625299 VSIG10L2P0DP72 767 aa12.03□□□□□ -0.48
PNKP-218ENST00000625299 SAA4P35542 130 aa12.03□□□□□ -0.48
PNKP-218ENST00000625299 RPS6KA3P51812 740 aa12.03□□□□□ -0.48
PNKP-218ENST00000625299 EFNB2P52799 333 aa12.03□□□□□ -0.48
PNKP-218ENST00000625299 TPTEP56180 551 aa12.03□□□□□ -0.48
PNKP-218ENST00000625299 ZNF92Q03936 586 aa12.03□□□□□ -0.48
PNKP-218ENST00000625299 ECH1Q13011 328 aa12.03□□□□□ -0.48
PNKP-218ENST00000625299 IKZF1Q13422 519 aa12.03□□□□□ -0.48
PNKP-218ENST00000625299 SNAI3Q3KNW1 292 aa12.03□□□□□ -0.48
PNKP-218ENST00000625299 KRTAP27-1Q3LI81 207 aa12.03□□□□□ -0.48
PNKP-218ENST00000625299 WDR38Q5JTN6 314 aa12.03□□□□□ -0.48
PNKP-218ENST00000625299 VAX1Q5SQQ9 334 aa12.03□□□□□ -0.48
PNKP-218ENST00000625299 METAP1DQ6UB28 335 aaPredicted RBP12.03□□□□□ -0.48
PNKP-218ENST00000625299 SPERTQ8NA61 448 aa12.03□□□□□ -0.48
PNKP-218ENST00000625299 PLPP7Q8NBV4 271 aa12.03□□□□□ -0.48
PNKP-218ENST00000625299 OR2T12Q8NG77 320 aa12.03□□□□□ -0.48
PNKP-218ENST00000625299 OR2AJ1Q8NGZ0 328 aa12.03□□□□□ -0.48
PNKP-218ENST00000625299 PPP1R35Q8TAP8 253 aa12.03□□□□□ -0.48
PNKP-218ENST00000625299 H1FXQ92522 213 aaKnown RBP12.03□□□□□ -0.48
PNKP-218ENST00000625299 RSRC1Q96IZ7 334 aaKnown RBP12.03□□□□□ -0.48
PNKP-218ENST00000625299 CLPTM1LQ96KA5 538 aa12.03□□□□□ -0.48
PNKP-218ENST00000625299 TMEM120AQ9BXJ8 343 aa12.03□□□□□ -0.48
PNKP-218ENST00000625299 SRA1Q9HD15 236 aaKnown RBP12.03□□□□□ -0.48
PNKP-218ENST00000625299 SIGLEC7Q9Y286 467 aa12.03□□□□□ -0.48
PNKP-218ENST00000625299 TMEM5Q9Y2B1 443 aa12.03□□□□□ -0.48
PNKP-218ENST00000625299 DNAH3Q8TD57 4116 aa12.03□□□□□ -0.48
PNKP-218ENST00000625299 IGLV1-36A0A0B4J1U3 117 aa12.02□□□□□ -0.49
PNKP-218ENST00000625299 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.02□□□□□ -0.49
PNKP-218ENST00000625299 M0R135 149 aa12.02□□□□□ -0.49
PNKP-218ENST00000625299 MRASO14807 208 aa12.02□□□□□ -0.49
PNKP-218ENST00000625299 PPP1R3DO95685 299 aa12.02□□□□□ -0.49
PNKP-218ENST00000625299 HLA-DQA2P01906 255 aa12.02□□□□□ -0.49
PNKP-218ENST00000625299 PCK2Q16822 640 aa12.02□□□□□ -0.49
PNKP-218ENST00000625299 MICBQ29980 383 aa12.02□□□□□ -0.49
PNKP-218ENST00000625299 C11orf91Q3C1V1 193 aa12.02□□□□□ -0.49
PNKP-218ENST00000625299 TEX36Q5VZQ5 186 aa12.02□□□□□ -0.49
PNKP-218ENST00000625299 LY6G5BQ8NDX9 201 aa12.02□□□□□ -0.49
PNKP-218ENST00000625299 OR2T6Q8NHC8 308 aa12.02□□□□□ -0.49
PNKP-218ENST00000625299 LRRC29Q8WV35 223 aa12.02□□□□□ -0.49
PNKP-218ENST00000625299 ZNF799Q96GE5 643 aa12.02□□□□□ -0.49
PNKP-218ENST00000625299 GPX7Q96SL4 187 aaPredicted RBP12.02□□□□□ -0.49
PNKP-218ENST00000625299 NSRP1Q9H0G5 558 aaKnown RBP12.02□□□□□ -0.49
PNKP-218ENST00000625299 ADA2Q9NZK5 511 aa12.02□□□□□ -0.49
PNKP-218ENST00000625299 KAAG1Q9UBP8 84 aa12.02□□□□□ -0.49
PNKP-218ENST00000625299 B9D1Q9UPM9 204 aa12.02□□□□□ -0.49
PNKP-218ENST00000625299 N6AMT1Q9Y5N5 214 aa12.02□□□□□ -0.49
PNKP-218ENST00000625299 A0A0G2JND7 137 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 BHLHE40O14503 412 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 NDUFB3O43676 98 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 XPNPEP2O43895 674 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 PTP4A3O75365 173 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 VSIG8P0DPA2 414 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 ANOS1P23352 680 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 MZT1Q08AG7 82 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 RFX4Q33E94 735 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 SLC36A3Q495N2 470 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 IFI44LQ53G44 452 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 FGD3Q5JSP0 725 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 GLYATL3Q5SZD4 288 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 C11orf88Q6PI97 169 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 DPY19L2P2Q6ZN68 376 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 FKBP9P1Q75LS8 142 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 SLC36A1Q7Z2H8 476 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 TSEN54Q7Z6J9 526 aaKnown RBP12.01□□□□□ -0.49
PNKP-218ENST00000625299 OR6V1Q8N148 313 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 Q8N7P7 452 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 SLC26A10Q8NG04 563 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 OR4S1Q8NGB4 309 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 OR8S1Q8NH09 359 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 CFHR4Q92496 578 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 PHF21AQ96BD5 680 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 SEH1LQ96EE3 360 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 ERMAPQ96PL5 475 aaPredicted RBP12.01□□□□□ -0.49
PNKP-218ENST00000625299 NMNAT3Q96T66 252 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 PNRC2Q9NPJ4 139 aaKnown RBP12.01□□□□□ -0.49
PNKP-218ENST00000625299 C14orf119Q9NWQ9 140 aa12.01□□□□□ -0.49
PNKP-218ENST00000625299 MRPL15Q9P015 296 aaKnown RBP12.01□□□□□ -0.49
PNKP-218ENST00000625299 ACOT8O14734 319 aa12□□□□□ -0.49
PNKP-218ENST00000625299 MPIG6BO95866 241 aa12□□□□□ -0.49
PNKP-218ENST00000625299 RENP00797 406 aa12□□□□□ -0.49
PNKP-218ENST00000625299 LHBP01229 141 aa12□□□□□ -0.49
PNKP-218ENST00000625299 TROVE2P10155 538 aaKnown RBP eCLIP12□□□□□ -0.49
PNKP-218ENST00000625299 KIR2DS4P43632 304 aa12□□□□□ -0.49
PNKP-218ENST00000625299 FXYD6P3P58550 94 aa12□□□□□ -0.49
PNKP-218ENST00000625299 GMFBP60983 142 aa12□□□□□ -0.49
PNKP-218ENST00000625299 ZBTB37Q5TC79 503 aa12□□□□□ -0.49
PNKP-218ENST00000625299 CYP4Z1Q86W10 505 aa12□□□□□ -0.49
PNKP-218ENST00000625299 OR56B2PQ8NGI1 322 aa12□□□□□ -0.49
PNKP-218ENST00000625299 OR51G2Q8NGK0 314 aa12□□□□□ -0.49
PNKP-218ENST00000625299 SLC7A13Q8TCU3 470 aa12□□□□□ -0.49
PNKP-218ENST00000625299 C17orf50Q8WW18 174 aa12□□□□□ -0.49
PNKP-218ENST00000625299 STON2Q8WXE9 905 aa12□□□□□ -0.49
PNKP-218ENST00000625299 RORBQ92753 470 aa12□□□□□ -0.49
PNKP-218ENST00000625299 SPTSSAQ969W0 71 aa12□□□□□ -0.49
PNKP-218ENST00000625299 R3HDM4Q96D70 268 aa12□□□□□ -0.49
PNKP-218ENST00000625299 HSH2DQ96JZ2 352 aa12□□□□□ -0.49
PNKP-218ENST00000625299 SSX3Q99909 188 aa12□□□□□ -0.49
PNKP-218ENST00000625299 MMP28Q9H239 520 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms