RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 OR4D6Q8NGJ1 314 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 AQP3Q92482 292 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 C14orf144Q96I85 54 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 RHOVQ96L33 236 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 TBL1XR1Q9BZK7 514 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 ACKR4Q9NPB9 350 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 RPS10P5Q9NQ39 176 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 SOHLH2Q9NX45 425 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 GDF2Q9UK05 429 aaPredicted RBP7.77□□□□□ -1.17
VCL-207ENST00000624354 OR52A1Q9UKL2 312 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 RAB22AQ9UL26 194 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 COA3Q9Y2R0 106 aaPredicted RBP7.77□□□□□ -1.17
VCL-207ENST00000624354 TMED7Q9Y3B3 224 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 FANCMQ8IYD8 2048 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 FREM2Q5SZK8 3169 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 LOC390937A0A1W2PQ73 354 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 EEF1E1-BLOC1S5C9J1V9 151 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 SULT2B1O00204 365 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 IL2RAP01589 272 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 NDUFB7P17568 137 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 AKR1C3P42330 323 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 ARRB1P49407 418 aaPredicted RBP7.77□□□□□ -1.17
VCL-207ENST00000624354 RELQ04864 619 aaPredicted RBP7.77□□□□□ -1.17
VCL-207ENST00000624354 AIMP2Q13155 320 aaKnown RBP7.77□□□□□ -1.17
VCL-207ENST00000624354 ZNF260Q3ZCT1 412 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 KRBOX4Q5JUW0 171 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 HLA-DQA1Q5Y7H0 255 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 RHOUQ7L0Q8 258 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 KCTD9Q7L273 389 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 ZNF383Q8NA42 475 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 ZNF248Q8NDW4 579 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 FAM46BQ96A09 425 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 CPNE4Q96A23 557 aaPredicted RBP7.77□□□□□ -1.17
VCL-207ENST00000624354 LURAP1Q96LR2 239 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 SEC61A2Q9H9S3 476 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 RHOFQ9HBH0 211 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 TMED7-TICAM2A0A0A6YYA0 188 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 SPTY2D1-AS1A0A0U1RR47 76 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 TMEM269A0A1B0GVZ9 245 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 CDC14CA4D256 554 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 C5orf51A6NDU8 294 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 H0YIG0 161 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 RAB27BO00194 218 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 ZNF208O43345 1280 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 DXOO77932 396 aaKnown RBP7.76□□□□□ -1.17
VCL-207ENST00000624354 IFNA6P05013 189 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 ISG15P05161 165 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 SFTA3P0C7M3 94 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 NCMAPQ5T1S8 102 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 FAHD2BQ6P2I3 314 aaPredicted RBP7.76□□□□□ -1.17
VCL-207ENST00000624354 GVQW1Q8N7I0 195 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 OR5AP2Q8NGF4 316 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 SLAMF9Q96A28 289 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 RAB3CQ96E17 227 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 FAHD2AQ96GK7 314 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 MEGF10Q96KG7 1140 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 TMEM68Q96MH6 324 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 GAS2L1Q99501 681 aaPredicted RBP7.76□□□□□ -1.17
VCL-207ENST00000624354 NRSN2Q9GZP1 204 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 HRH4Q9H3N8 390 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 TMEM100Q9NV29 134 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 RP1P56715 2156 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 TDRD6O60522 2096 aaKnown RBP7.76□□□□□ -1.17
VCL-207ENST00000624354 CPED1A4D0V7 1026 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 C17orf51A8MQB3 221 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 A8MVM7 634 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 MPZL1O95297 269 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 AHSA1O95433 338 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 ERCC1P07992 297 aaPredicted RBP7.76□□□□□ -1.17
VCL-207ENST00000624354 THEGLP0DJG4 465 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 AKR1C4P17516 323 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 MPZP25189 248 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 ITGA3P26006 1051 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 POLR2HP52434 150 aaKnown RBP7.76□□□□□ -1.17
VCL-207ENST00000624354 SPCS3P61009 180 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 CHAF1BQ13112 559 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 OR7A5Q15622 319 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 ELAVL1Q15717 326 aaKnown RBP7.76□□□□□ -1.17
VCL-207ENST00000624354 C1orf140Q5VVS0 124 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 TMEM92Q6UXU6 159 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 ETV3LQ6ZN32 361 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 DCXRQ7Z4W1 244 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.76□□□□□ -1.17
VCL-207ENST00000624354 OCSTAMPQ9BR26 566 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 GFOD1Q9NXC2 390 aa7.76□□□□□ -1.17
VCL-207ENST00000624354 TCRBV21S2A2A0A5A6 115 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 A6NLC8 198 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 ALG1L2C9J202 215 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 RNASEK-C17orf49H0YIS7 233 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 PLPP3O14495 311 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 PPIHO43447 177 aaKnown RBP7.75□□□□□ -1.17
VCL-207ENST00000624354 SFTPCP11686 197 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 PSMB6P28072 239 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 GNALP38405 381 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 RBP2P50120 134 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 BLKP51451 505 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 DCAF7P61962 342 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 FZD2Q14332 565 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 DNM1P34Q6PK57 102 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 BAP18Q8IXM2 172 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms