RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 ZNF43P17038 809 aa13.36□□□□□ -0.27
ATRX-211ENST00000623321 CALCRP30988 508 aa13.36□□□□□ -0.27
ATRX-211ENST00000623321 S100A11P31949 105 aa13.36□□□□□ -0.27
ATRX-211ENST00000623321 SUCLG1P53597 346 aaKnown RBP13.36□□□□□ -0.27
ATRX-211ENST00000623321 H2BFSP57053 126 aa13.36□□□□□ -0.27
ATRX-211ENST00000623321 ACTBP60709 375 aa13.36□□□□□ -0.27
ATRX-211ENST00000623321 ACTG1P63261 375 aa13.36□□□□□ -0.27
ATRX-211ENST00000623321 GUCA2AQ02747 115 aa13.36□□□□□ -0.27
ATRX-211ENST00000623321 HLXQ14774 488 aaPredicted RBP13.36□□□□□ -0.27
ATRX-211ENST00000623321 C2orf76Q3KRA6 126 aa13.36□□□□□ -0.27
ATRX-211ENST00000623321 PDSS1Q5T2R2 415 aa13.36□□□□□ -0.27
ATRX-211ENST00000623321 OR2V1Q8NHB1 315 aa13.36□□□□□ -0.27
ATRX-211ENST00000623321 SLC25A28Q96A46 364 aa13.36□□□□□ -0.27
ATRX-211ENST00000623321 WDR89Q96FK6 387 aaPredicted RBP13.36□□□□□ -0.27
ATRX-211ENST00000623321 SRXN1Q9BYN0 137 aa13.36□□□□□ -0.27
ATRX-211ENST00000623321 ALX4Q9H161 411 aaPredicted RBP13.36□□□□□ -0.27
ATRX-211ENST00000623321 SLC6A15Q9H2J7 730 aa13.36□□□□□ -0.27
ATRX-211ENST00000623321 C1orf198Q9H425 327 aa13.36□□□□□ -0.27
ATRX-211ENST00000623321 MRPL22Q9NWU5 206 aaKnown RBP13.36□□□□□ -0.27
ATRX-211ENST00000623321 MED29Q9NX70 200 aa13.36□□□□□ -0.27
ATRX-211ENST00000623321 ZNF224Q9NZL3 707 aa13.36□□□□□ -0.27
ATRX-211ENST00000623321 MED12Q93074 2177 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 TMEM272A0A1B0GTI8 110 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 SLC22A23A1A5C7 686 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 K7ENP7 123 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 RAMP1O60894 148 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 RP2O75695 350 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 PNPP00491 289 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 HLA-DQA2P01906 255 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 RLN1P04808 185 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 ACSM4P0C7M7 580 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 ZNF35P13682 527 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 PPP3CBP16298 524 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 KLK2P20151 261 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 LHX2P50458 406 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 CLDN15P56746 228 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 KCTD18Q6PI47 426 aaPredicted RBP13.35□□□□□ -0.27
ATRX-211ENST00000623321 INO80CQ6PI98 192 aaPredicted RBP13.35□□□□□ -0.27
ATRX-211ENST00000623321 CATSPERDQ86XM0 798 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 CDH26Q8IXH8 852 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 MUC20Q8N307 709 aaPredicted RBP13.35□□□□□ -0.27
ATRX-211ENST00000623321 ZNF454Q8N9F8 522 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 OR51S1Q8NGJ8 323 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 CCDC120Q96HB5 630 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 REG4Q9BYZ8 158 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 SCPEP1Q9HB40 452 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 RDH8Q9NYR8 311 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 DHDHQ9UQ10 334 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 SLC22A13Q9Y226 551 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 SPEF1Q9Y4P9 236 aa13.35□□□□□ -0.27
ATRX-211ENST00000623321 IGHV3-15A0A0B4J1V0 119 aa13.34□□□□□ -0.27
ATRX-211ENST00000623321 MFSD2BA6NFX1 497 aa13.34□□□□□ -0.27
ATRX-211ENST00000623321 TRAF3IP2O43734 574 aaPredicted RBP13.34□□□□□ -0.27
ATRX-211ENST00000623321 ACTL6AO96019 429 aa13.34□□□□□ -0.27
ATRX-211ENST00000623321 ITGB2P05107 769 aa13.34□□□□□ -0.27
ATRX-211ENST00000623321 SPARCP09486 303 aa13.34□□□□□ -0.27
ATRX-211ENST00000623321 IGFBP3P17936 291 aaPredicted RBP13.34□□□□□ -0.27
ATRX-211ENST00000623321 ZP3P21754 424 aa13.34□□□□□ -0.27
ATRX-211ENST00000623321 EIF1AXP47813 144 aaKnown RBP13.34□□□□□ -0.27
ATRX-211ENST00000623321 BIDP55957 195 aa13.34□□□□□ -0.27
ATRX-211ENST00000623321 MFGE8Q08431 387 aaPredicted RBP13.34□□□□□ -0.27
ATRX-211ENST00000623321 C2orf68Q2NKX9 166 aa13.34□□□□□ -0.27
ATRX-211ENST00000623321 RNFT1Q5M7Z0 435 aa13.34□□□□□ -0.27
ATRX-211ENST00000623321 GLT8D1Q68CQ7 371 aa13.34□□□□□ -0.27
ATRX-211ENST00000623321 STEAP1BQ6NZ63 245 aa13.34□□□□□ -0.27
ATRX-211ENST00000623321 TMUB2Q71RG4 321 aa13.34□□□□□ -0.27
ATRX-211ENST00000623321 OR10D3Q8NH80 312 aa13.34□□□□□ -0.27
ATRX-211ENST00000623321 SCARB1Q8WTV0 552 aa13.34□□□□□ -0.27
ATRX-211ENST00000623321 UCN2Q96RP3 112 aa13.34□□□□□ -0.27
ATRX-211ENST00000623321 KCNK17Q96T54 332 aa13.34□□□□□ -0.27
ATRX-211ENST00000623321 DEFB127Q9H1M4 99 aa13.34□□□□□ -0.27
ATRX-211ENST00000623321 KCNK15Q9H427 330 aa13.34□□□□□ -0.27
ATRX-211ENST00000623321 ZDHHC11Q9H8X9 412 aa13.34□□□□□ -0.27
ATRX-211ENST00000623321 CKLFQ9UBR5 152 aa13.34□□□□□ -0.27
ATRX-211ENST00000623321 H3BSH0 61 aa13.33□□□□□ -0.27
ATRX-211ENST00000623321 GOSR2O14653 212 aa13.33□□□□□ -0.27
ATRX-211ENST00000623321 CXCL13O43927 109 aa13.33□□□□□ -0.27
ATRX-211ENST00000623321 SLC16A7O60669 478 aa13.33□□□□□ -0.27
ATRX-211ENST00000623321 SCO1O75880 301 aa13.33□□□□□ -0.27
ATRX-211ENST00000623321 CD3DP04234 171 aa13.33□□□□□ -0.27
ATRX-211ENST00000623321 LPLP06858 475 aa13.33□□□□□ -0.27
ATRX-211ENST00000623321 GABRA1P14867 456 aa13.33□□□□□ -0.27
ATRX-211ENST00000623321 ZNF708P17019 499 aa13.33□□□□□ -0.27
ATRX-211ENST00000623321 CRABP1P29762 137 aa13.33□□□□□ -0.27
ATRX-211ENST00000623321 RIDAP52758 137 aaKnown RBP13.33□□□□□ -0.27
ATRX-211ENST00000623321 TAS2R19P59542 299 aa13.33□□□□□ -0.27
ATRX-211ENST00000623321 OR7E24Q6IFN5 339 aa13.33□□□□□ -0.27
ATRX-211ENST00000623321 GABRG1Q8N1C3 465 aa13.33□□□□□ -0.27
ATRX-211ENST00000623321 TMEM229BQ8NBD8 167 aa13.33□□□□□ -0.27
ATRX-211ENST00000623321 ASB5Q8WWX0 329 aa13.33□□□□□ -0.27
ATRX-211ENST00000623321 CPNE4Q96A23 557 aaPredicted RBP13.33□□□□□ -0.27
ATRX-211ENST00000623321 EMC6Q9BV81 110 aa13.33□□□□□ -0.27
ATRX-211ENST00000623321 SF3B5Q9BWJ5 86 aaKnown RBP13.33□□□□□ -0.27
ATRX-211ENST00000623321 ATG5Q9H1Y0 275 aa13.33□□□□□ -0.27
ATRX-211ENST00000623321 UPB1Q9UBR1 384 aa13.33□□□□□ -0.27
ATRX-211ENST00000623321 ZNF107Q9UII5 783 aaPredicted RBP13.33□□□□□ -0.27
ATRX-211ENST00000623321 A0A0A6YYH2 397 aa13.33□□□□□ -0.28
ATRX-211ENST00000623321 A6NJ64 397 aa13.33□□□□□ -0.28
ATRX-211ENST00000623321 SMAD9O15198 467 aaKnown RBP13.33□□□□□ -0.28
ATRX-211ENST00000623321 ARPC5O15511 151 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms