RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 TCRBV9S1A1TA0A576 114 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 TSPAN11A1L157 253 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 EFCAB10A6NFE3 127 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 TVP23AA6NH52 213 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 K7EN84 100 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 FGF16O43320 207 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 TGOLN2O43493 480 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 CXCL13O43927 109 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 ALOX12BO75342 701 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 SRP72O76094 671 aaKnown RBP2.77□□□□□ -1.97
BRCA1-229ENST00000621897 GLSO94925 669 aaPredicted RBP2.77□□□□□ -1.97
BRCA1-229ENST00000621897 MPZL1O95297 269 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 IGHV3-23P01764 117 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 CRABP2P29373 138 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 SERPINB1P30740 379 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 OR3A4PP47883 348 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 TFPI2P48307 235 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 SERPINB8P50452 374 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 CAV2P51636 162 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 AP2S1P53680 142 aaPredicted RBP2.77□□□□□ -1.97
BRCA1-229ENST00000621897 FBXW4P57775 412 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 TAS2R39P59534 338 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 MLLT11Q13015 90 aaPredicted RBP2.77□□□□□ -1.97
BRCA1-229ENST00000621897 FLOT2Q14254 428 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 LAGE3Q14657 143 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 PTGES3Q15185 160 aaKnown RBP2.77□□□□□ -1.97
BRCA1-229ENST00000621897 TAL2Q16559 108 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 TIGITQ495A1 244 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 TMEM52BQ4KMG9 183 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 CCDC58Q4VC31 144 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 ZCWPW2Q504Y3 356 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 SPIN3Q5JUX0 258 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 Q6P435 159 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 ASCL5Q7RTU5 278 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 TSEN54Q7Z6J9 526 aaKnown RBP2.77□□□□□ -1.97
BRCA1-229ENST00000621897 LYG2Q86SG7 212 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 TRAPPC5Q8IUR0 188 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 OR2L13Q8N349 312 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 ZNF740Q8NDX6 193 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 CCDC54Q8NEL0 328 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 ATP6V1C2Q8NEY4 427 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 PXT1Q8NFP0 134 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 OR5L1Q8NGL2 311 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 OR1S2Q8NGQ3 325 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 OR51A7Q8NH64 312 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 PIGXQ8TBF5 258 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 APH1BQ8WW43 257 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 IFT81Q8WYA0 676 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 TADA1Q96BN2 335 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 FLYWCH2Q96CP2 140 aaKnown RBP2.77□□□□□ -1.97
BRCA1-229ENST00000621897 SLC25A38Q96DW6 304 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 CEP170P1Q96L14 293 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 RNF2Q99496 336 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 DHX35Q9H5Z1 703 aaKnown RBP2.77□□□□□ -1.97
BRCA1-229ENST00000621897 TMBIM4Q9HC24 238 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 SPANXB1Q9NS25 103 aaPredicted RBP2.77□□□□□ -1.97
BRCA1-229ENST00000621897 DDX19AQ9NUU7 478 aaKnown RBP2.77□□□□□ -1.97
BRCA1-229ENST00000621897 CLN6Q9NWW5 311 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 HRASLS2Q9NWW9 162 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 SMPXQ9UHP9 88 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 LSM7Q9UK45 103 aaKnown RBP2.77□□□□□ -1.97
BRCA1-229ENST00000621897 NEU3Q9UQ49 428 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 PSG11Q9UQ72 335 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 FLVCR1Q9Y5Y0 555 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 ARL5AQ9Y689 179 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 MTCH2Q9Y6C9 303 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 METP08581 1390 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 CAMSAP1Q5T5Y3 1602 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 ZNF532Q9HCE3 1301 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 KIR2DL5BA0A0G2JN68 375 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 KIR2DL5BA0A0G2JPC4 375 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 ZNF729A6NN14 1252 aaPredicted RBP2.76□□□□□ -1.97
BRCA1-229ENST00000621897 OR2AT4A6NND4 320 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 IDSB3KWA1 339 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 SEC14L6B5MCN3 397 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 TRDCB7Z8K6 153 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.76□□□□□ -1.97
BRCA1-229ENST00000621897 PLPP1O14494 284 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 KMOO15229 486 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 NDUFA2O43678 99 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 SOX15O60248 233 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 STX10O60499 249 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 MPDU1O75352 247 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 CLDN11O75508 207 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 TRAPPC6AO75865 159 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 SERPINA1P01009 418 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 JCHAINP01591 159 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 ISG15P05161 165 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 CALB1P05937 261 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 C2P06681 752 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 HOXB7P09629 217 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 ZDHHC11BP0C7U3 371 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 UCHL3P15374 230 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 COX5AP20674 150 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 RFC3P40938 356 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 MAGEA12P43365 314 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 SLCO1A2P46721 670 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 OR4D2P58180 307 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 AQP6Q13520 282 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 GPNMBQ14956 572 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms