RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 NXT1Q9UKK6 140 aaKnown RBP6.54□□□□□ -1.36
COLCA1-205ENST00000620864 TMED3Q9Y3Q3 217 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 ANKRD34CP0C6C1 535 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 HIST1H1BP16401 226 aaKnown RBP6.54□□□□□ -1.36
COLCA1-205ENST00000620864 GNG4P50150 75 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 TRMT12Q53H54 448 aaKnown RBP6.54□□□□□ -1.36
COLCA1-205ENST00000620864 PABPC1L2AQ5JQF8 200 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 TAS1R1Q7RTX1 841 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 OSTM1Q86WC4 334 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 ANGPTL5Q86XS5 388 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 WSB1Q9Y6I7 421 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 ANKRD36CQ5JPF3 1778 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 A6NIN4 97 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 CDRT15L2A8MXV6 281 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 FCN1O00602 326 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 LINC01565O15544 149 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 VAMP5O95183 116 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 DEFB109BQ30KR1 87 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 ZNF765Q7L2R6 523 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 DCXRQ7Z4W1 244 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 UTP23Q9BRU9 249 aaKnown RBP6.54□□□□□ -1.36
COLCA1-205ENST00000620864 SLC25A4P12235 298 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 TGFBR1P36897 503 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 OR2T6Q8NHC8 308 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 FBXO27Q8NI29 283 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 LIPHQ8WWY8 451 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 GPA33Q99795 319 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 AKIP1Q9NQ31 210 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 HCSTQ9UBK5 93 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 FABP2P12104 132 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 PCMT1P22061 227 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 KIR2DS2P43631 304 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 RAB38P57729 211 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 C9orf135Q5VTT2 229 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 GLDNQ6ZMI3 551 aaPredicted RBP6.53□□□□□ -1.36
COLCA1-205ENST00000620864 OR52I2Q8NH67 350 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 OR1L1Q8NH94 360 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 MCHR2Q969V1 340 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 TIMD4Q96H15 378 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 SIRT3Q9NTG7 399 aaPredicted RBP6.53□□□□□ -1.36
COLCA1-205ENST00000620864 FKBP11Q9NYL4 201 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 OR5V1Q9UGF6 321 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 NAT8Q9UHE5 227 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 MRPS16Q9Y3D3 137 aaKnown RBP6.53□□□□□ -1.36
COLCA1-205ENST00000620864 SERINC4A6NH21 518 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 PRAMEF26H0Y7S4 382 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 GYPBP06028 91 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 PAFAH1B2P68402 229 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 SIX1Q15475 284 aaPredicted RBP6.53□□□□□ -1.36
COLCA1-205ENST00000620864 C6orf201Q7Z4U5 140 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 DOLPP1Q86YN1 238 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 PACRGQ96M98 296 aaPredicted RBP6.53□□□□□ -1.36
COLCA1-205ENST00000620864 COMMD5Q9GZQ3 224 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 BOLA1Q9Y3E2 137 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 LIPAP38571 399 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 SQSTM1Q13501 440 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 SLC16A12Q6ZSM3 486 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 TMEM25Q86YD3 366 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 AGBL5Q8NDL9 886 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 PPP1R1CQ8WVI7 109 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 MBD3L1Q8WWY6 194 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 TREX1Q9NSU2 369 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 AP5S1Q9NUS5 200 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 PRRG2O14669 202 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 EIF4E2O60573 245 aaKnown RBP6.53□□□□□ -1.36
COLCA1-205ENST00000620864 ALOX5APP20292 161 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 SLC6A1P30531 599 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 SPANXN5Q5MJ07 72 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 ZNF2Q9BSG1 426 aaPredicted RBP6.53□□□□□ -1.36
COLCA1-205ENST00000620864 IL17BQ9UHF5 180 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 LSM2Q9Y333 95 aaKnown RBP6.53□□□□□ -1.36
COLCA1-205ENST00000620864 MMACHCQ9Y4U1 282 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 HAND1O96004 215 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 CST5P28325 142 aaPredicted RBP6.53□□□□□ -1.36
COLCA1-205ENST00000620864 HTR6P50406 440 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 SEMA3BQ13214 749 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 IGFBP7Q16270 282 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 FAM78AQ5JUQ0 283 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 DPPA3Q6W0C5 159 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 TEX29Q8N6K0 151 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 SPPL3Q8TCT6 385 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 EID2BQ96D98 161 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 SMIM19Q96E16 107 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 EGLN2Q96KS0 407 aa6.53□□□□□ -1.36
COLCA1-205ENST00000620864 PMS2P1A4D2B8 440 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 HPP00738 406 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 UQCRFS1P47985 274 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 CSNK1EP49674 416 aaKnown RBP6.52□□□□□ -1.37
COLCA1-205ENST00000620864 VASPP50552 380 aaPredicted RBP6.52□□□□□ -1.37
COLCA1-205ENST00000620864 OLIG2Q13516 323 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 OR8B8Q15620 311 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 GFRALQ6UXV0 394 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 OR5AU1Q8NGC0 362 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 SLC38A5Q8WUX1 472 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 GPR137Q96N19 417 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 ADAT1Q9BUB4 502 aaKnown RBP6.52□□□□□ -1.37
COLCA1-205ENST00000620864 KCND3Q9UK17 655 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 SLC5A6Q9Y289 635 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 OR52A4PA6NMU1 304 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 LRP3O75074 770 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms