RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 HOXB5P09067 269 aa8.2□□□□□ -1.1
RBFOX1-223ENST00000620507 SNU13P55769 128 aaKnown RBP8.2□□□□□ -1.1
RBFOX1-223ENST00000620507 RPS27AP62979 156 aaKnown RBP8.2□□□□□ -1.1
RBFOX1-223ENST00000620507 UBA52P62987 128 aaKnown RBP8.2□□□□□ -1.1
RBFOX1-223ENST00000620507 ZMYND11Q15326 602 aa8.2□□□□□ -1.1
RBFOX1-223ENST00000620507 TCEAL6Q6IPX3 200 aa8.2□□□□□ -1.1
RBFOX1-223ENST00000620507 LYPD8Q6UX82 237 aa8.2□□□□□ -1.1
RBFOX1-223ENST00000620507 C17orf82Q86X59 251 aaPredicted RBP8.2□□□□□ -1.1
RBFOX1-223ENST00000620507 SGPP2Q8IWX5 399 aa8.2□□□□□ -1.1
RBFOX1-223ENST00000620507 OR6X1Q8NH79 312 aa8.2□□□□□ -1.1
RBFOX1-223ENST00000620507 SGCZQ96LD1 299 aa8.2□□□□□ -1.1
RBFOX1-223ENST00000620507 TREM1Q9NP99 234 aa8.2□□□□□ -1.1
RBFOX1-223ENST00000620507 PRMT8Q9NR22 394 aaPredicted RBP8.2□□□□□ -1.1
RBFOX1-223ENST00000620507 WRBO00258 174 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 SGCEO43556 437 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 CBR3O75828 277 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 CYB561P49447 251 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 DSCR4P56555 118 aaPredicted RBP8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 PCBD1P61457 104 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 CFHR1Q03591 330 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 PCK2Q16822 640 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 PLPPR5Q32ZL2 321 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 CLLU1Q5K131 121 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 RTL6Q6ICC9 239 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 FDX2Q6P4F2 183 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 SULF2Q8IWU5 870 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 OR11H4Q8NGC9 324 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 OR4D6Q8NGJ1 314 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 GPX8Q8TED1 209 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 KCNK17Q96T54 332 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 METTL9Q9H1A3 318 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 MBD2Q9UBB5 411 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 TIAF1O95411 115 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 RAB6AP20340 208 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 FXYD4P59646 89 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 B3GNTL1Q67FW5 361 aaPredicted RBP8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 GALNT16Q8N428 558 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 SLC38A9Q8NBW4 561 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 MARCH1Q8TCQ1 289 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 PIGCQ92535 297 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 ZFP64Q9NPA5 681 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 CA10Q9NS85 328 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 BOKQ9UMX3 212 aaPredicted RBP8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 CACNA1EQ15878 2313 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 A0A1W2PQM1 296 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 TNFSF11O14788 317 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 MRPL33O75394 65 aaKnown RBP8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 CLPSP04118 112 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 FAM157BP0CG42 384 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 PNLIPP16233 465 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 TBPP20226 339 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 LUMP51884 338 aaPredicted RBP8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 DHRS2Q13268 280 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 TOR2AQ5JU69 321 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 TEX30Q5JUR7 227 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 C9orf135Q5VTT2 229 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 FAM180AQ6UWF9 173 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 NAXDQ8IW45 347 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 ZNF100Q8IYN0 542 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 GVQW1Q8N7I0 195 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 BOLLQ8N9W6 283 aaKnown RBP8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 DTWD2Q8NBA8 298 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 ZNF416Q9BWM5 594 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 PTPRSQ13332 1948 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 ALPK3Q96L96 1907 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 MKI67P46013 3256 aaKnown RBP8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 MCRIP1C9JLW8 97 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 PRH1P02810 166 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 GSTP1P09211 210 aaKnown RBP8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 CCL4P13236 92 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 FAHP16930 419 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 ADH6P28332 368 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 MALLQ13021 153 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 ZNF565Q8N9K5 539 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 TMEM185AQ8NFB2 350 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 SEMA6DQ8NFY4 1073 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 OR2M3Q8NG83 312 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 GPR137Q96N19 417 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 MICU1Q9BPX6 476 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 CMSS1Q9BQ75 279 aaKnown RBP8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 OPN4Q9UHM6 478 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 EDARQ9UNE0 448 aa8.19□□□□□ -1.1
RBFOX1-223ENST00000620507 hCG_1807616A0A1W2PRN6 198 aa8.18□□□□□ -1.1
RBFOX1-223ENST00000620507 SDCBPO00560 298 aaPredicted RBP8.18□□□□□ -1.1
RBFOX1-223ENST00000620507 TTRP02766 147 aa8.18□□□□□ -1.1
RBFOX1-223ENST00000620507 PI3P19957 117 aa8.18□□□□□ -1.1
RBFOX1-223ENST00000620507 DMWDQ09019 674 aa8.18□□□□□ -1.1
RBFOX1-223ENST00000620507 TMEM255AQ5JRV8 349 aa8.18□□□□□ -1.1
RBFOX1-223ENST00000620507 ZNF684Q5T5D7 378 aa8.18□□□□□ -1.1
RBFOX1-223ENST00000620507 ZNF585AQ6P3V2 769 aa8.18□□□□□ -1.1
RBFOX1-223ENST00000620507 LYG2Q86SG7 212 aa8.18□□□□□ -1.1
RBFOX1-223ENST00000620507 ARHGEF39Q8N4T4 335 aa8.18□□□□□ -1.1
RBFOX1-223ENST00000620507 ADAT3Q96EY9 351 aaPredicted RBP8.18□□□□□ -1.1
RBFOX1-223ENST00000620507 NELFAQ9H3P2 528 aa8.18□□□□□ -1.1
RBFOX1-223ENST00000620507 SDHAF2Q9NX18 166 aa8.18□□□□□ -1.1
RBFOX1-223ENST00000620507 RALGAPA1Q6GYQ0 2036 aa8.18□□□□□ -1.1
RBFOX1-223ENST00000620507 CIB4A0PJX0 185 aa8.18□□□□□ -1.1
RBFOX1-223ENST00000620507 ERVH48-1M5A8F1 160 aa8.18□□□□□ -1.1
RBFOX1-223ENST00000620507 CDK2AP1O14519 115 aa8.18□□□□□ -1.1
RBFOX1-223ENST00000620507 CXCL13O43927 109 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms