RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 STARD10Q9Y365 291 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 CFAP46Q8IYW2 2715 aa6.93□□□□□ -1.3
CPNE3-209ENST00000620393 KMT2BQ9UMN6 2715 aaPredicted RBP6.93□□□□□ -1.3
CPNE3-209ENST00000620393 RTTNQ86VV8 2226 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 LOC100506127A0A0U1RQW1 187 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 A0A1B0GVI7 797 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 LOC390937A0A1W2PQ73 354 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 ZNF879B4DU55 563 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 PYCARD-AS1I3L0S3 204 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 ZNF701M0R085 212 aaPredicted RBP6.92□□□□□ -1.3
CPNE3-209ENST00000620393 GABRPO00591 440 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 CASKO14936 926 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 XRCC2O43543 280 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 MTRF1O75570 445 aaKnown RBP6.92□□□□□ -1.3
CPNE3-209ENST00000620393 RGS9O75916 674 aaPredicted RBP6.92□□□□□ -1.3
CPNE3-209ENST00000620393 GABARAPO95166 117 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 RAF1P04049 648 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 ZNF12P17014 697 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 NR4A1P22736 598 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 CFL1P23528 166 aaKnown RBP6.92□□□□□ -1.3
CPNE3-209ENST00000620393 CALCRP30988 508 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 MAGEB1P43366 347 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 ZNF92Q03936 586 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 MALLQ13021 153 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 SNTB1Q13884 538 aaKnown RBP6.92□□□□□ -1.3
CPNE3-209ENST00000620393 INSL4Q14641 139 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 Q499Y3 187 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 ZMAT1Q5H9K5 638 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 GLYATL3Q5SZD4 288 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 TMEM108Q6UXF1 575 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 SLC16A12Q6ZSM3 486 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 DOK3Q7L591 496 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 ZNF101Q8IZC7 436 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 OR13C5Q8NGS8 318 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 OR14K1Q8NGZ2 314 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 RAB2BQ8WUD1 216 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 AKAP1Q92667 903 aaKnown RBP eCLIP6.92□□□□□ -1.3
CPNE3-209ENST00000620393 RPL3LQ92901 407 aaKnown RBP6.92□□□□□ -1.3
CPNE3-209ENST00000620393 TRMT61AQ96FX7 289 aaKnown RBP6.92□□□□□ -1.3
CPNE3-209ENST00000620393 REEP6Q96HR9 211 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 LYZL4Q96KX0 146 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 CHCHD6Q9BRQ6 235 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 SOX7Q9BT81 388 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 CENPOQ9BU64 300 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 BCL2L14Q9BZR8 327 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 EXOSC4Q9NPD3 245 aaKnown RBP6.92□□□□□ -1.3
CPNE3-209ENST00000620393 ZNF275Q9NSD4 429 aaPredicted RBP6.92□□□□□ -1.3
CPNE3-209ENST00000620393 TXNL4BQ9NX01 149 aaKnown RBP6.92□□□□□ -1.3
CPNE3-209ENST00000620393 GSTK1Q9Y2Q3 226 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 SPEF1Q9Y4P9 236 aa6.92□□□□□ -1.3
CPNE3-209ENST00000620393 TRBV5-7A0A0A0MS05 114 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 LOC107986453A0A1B0GWG9 222 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 A0A1W2PPK0 400 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 CCDC160A6NGH7 325 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 DHRS7CA6NNS2 312 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 J3QKU1 62 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 PIN1P1O15428 100 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 SMPD2O60906 423 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 UCHL1P09936 223 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 OCM2P0CE71 109 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 FAM157BP0CG42 384 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 VSIG8P0DPA2 414 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 GLRXP35754 106 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 KIR2DL3P43628 341 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 MAP2K3P46734 347 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 SOX2P48431 317 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 GSK3AP49840 483 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 PPP1CBP62140 327 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 LSM3P62310 102 aaKnown RBP6.91□□□□□ -1.3
CPNE3-209ENST00000620393 FAM3AP98173 230 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 SRSF1Q07955 248 aaKnown RBP eCLIP6.91□□□□□ -1.3
CPNE3-209ENST00000620393 GK2Q14410 553 aaPredicted RBP6.91□□□□□ -1.3
CPNE3-209ENST00000620393 NCMAPQ5T1S8 102 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 FOXB2Q5VYV0 432 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 C22orf42Q6IC83 251 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 RFPL4BQ6ZWI9 263 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 OR51A4Q8NGJ6 313 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 OR1J1Q8NGS3 322 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 OR2AE1Q8NHA4 323 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 THRSPQ92748 146 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 FGGYQ96C11 551 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 ISOC1Q96CN7 298 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 C10orf35Q96D05 121 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 HAVCR1Q96D42 359 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 CMBLQ96DG6 245 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 MARS2Q96GW9 593 aaKnown RBP6.91□□□□□ -1.3
CPNE3-209ENST00000620393 FAM71F1Q96KD3 344 aaPredicted RBP6.91□□□□□ -1.3
CPNE3-209ENST00000620393 DERL3Q96Q80 235 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 KCNS3Q9BQ31 491 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 PPIL3Q9H2H8 161 aaKnown RBP6.91□□□□□ -1.3
CPNE3-209ENST00000620393 POFUT1Q9H488 388 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 OPA3Q9H6K4 179 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 ESRP2Q9H6T0 727 aaKnown RBP6.91□□□□□ -1.3
CPNE3-209ENST00000620393 NOX4Q9NPH5 578 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 PTTG3PQ9NZH4 202 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 RSL24D1Q9UHA3 163 aaKnown RBP6.91□□□□□ -1.3
CPNE3-209ENST00000620393 DHDHQ9UQ10 334 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 V9GYS6 101 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 ZNF462Q96JM2 2506 aa6.91□□□□□ -1.3
CPNE3-209ENST00000620393 RELNP78509 3460 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms