RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 GPR85P60893 370 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 RPL18Q07020 188 aaKnown RBP6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 ARFRP1Q13795 201 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 DNM1P34Q6PK57 102 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 GALNTL5Q7Z4T8 443 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 TMEM41AQ96HV5 264 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 GPER1Q99527 375 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 NKX3-1Q99801 234 aaPredicted RBP6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 UBQLN4Q9NRR5 601 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 KLHDC2Q9Y2U9 406 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 AGPAT2O15120 278 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 GDF9O60383 454 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 UPK3AO75631 287 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 TIAF1O95411 115 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 ITGA5P08648 1049 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 SLC25A4P12235 298 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 ZNF20P17024 532 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 ALOX5APP20292 161 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 RFC3P40938 356 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 GFRA1P56159 465 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 DCDP81605 110 aaKnown RBP6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 MGAT2Q10469 447 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 ZNF74Q16587 644 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 TMEM225Q6GV28 225 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 RHBDD2Q6NTF9 364 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 ZNF704Q6ZNC4 412 aaPredicted RBP6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 CDC20BQ86Y33 519 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 ZNF679Q8IYX0 411 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 ZNRF4Q8WWF5 429 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 DAZLQ92904 295 aaKnown RBP6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 MR1Q95460 341 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 EDEM2Q9BV94 578 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 TBL1XR1Q9BZK7 514 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 CST11Q9H112 138 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 COPS7AQ9UBW8 275 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 TMEM131Q92545 1883 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 ADAMTS9Q9P2N4 1935 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 FRYLO94915 3013 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 A0A0A6YYH2 397 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 IGHV3-20A0A0C4DH32 117 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 A6NJ64 397 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 ERCC1P07992 297 aaPredicted RBP6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 H2BFMP0C1H6 154 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 GP1BBP13224 206 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 CCL4P13236 92 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 B2MP61769 119 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 PSG6Q00889 435 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 GLO1Q04760 184 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 PPP1R1AQ13522 171 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 SLC17A1Q14916 467 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 INPP5JQ15735 1006 aaPredicted RBP6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 PLEKHN1Q494U1 663 aaPredicted RBP6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 FHL5Q5TD97 284 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 OR10K2Q6IF99 312 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 IGF2-ASQ6U949 168 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 SLC38A9Q8NBW4 561 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 OR4S1Q8NGB4 309 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 C16orf52Q8NHV5 167 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 SEH1LQ96EE3 360 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 ZNF426Q9BUY5 554 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 EXOSC3Q9NQT5 275 aaKnown RBP6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 LANCL2Q9NS86 450 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 SEMA5BQ9P283 1151 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 MYO15AQ9UKN7 3530 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 AHCTF1Q8WYP5 2266 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 ZNF264O43296 627 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 AHSA1O95433 338 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 SFTPBP07988 381 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 SERPINF1P36955 418 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 EMP2P54851 167 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 PLA2G7Q13093 441 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 ZNF141Q15928 474 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 GUCA2BQ16661 112 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 TMEM244Q5VVB8 128 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 FJX1Q86VR8 437 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 OR4C3Q8NH37 302 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 OTOSQ8NHW6 89 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 CTHRC1Q96CG8 243 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 OR8B4Q96RC9 309 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 LPAR4Q99677 370 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 TCEAL7Q9BRU2 100 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 NMNAT2Q9BZQ4 307 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 VN1R1Q9GZP7 353 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 SMCO4Q9NRQ5 59 aa6.24□□□□□ -1.41
SRGAP3-213ENST00000618999 TRBV5-7A0A0A0MS05 114 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 TRAV14DV4A0A0A6YYC5 116 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 ALOX12BO75342 701 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 MED6O75586 246 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 LINC01590Q5TEZ4 76 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 OTPQ5XKR4 325 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 AWAT2Q6E213 333 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 NUP54Q7Z3B4 507 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 LDLRAD3Q86YD5 345 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 BCORP1Q8N888 145 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 NKAIN3Q8N8D7 197 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 C5orf34Q96MH7 638 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 S100A13Q99584 98 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 NRSN2Q9GZP1 204 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 RGCCQ9H4X1 137 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 MMP25Q9NPA2 562 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms