RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 IER3IP1Q9Y5U9 82 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 NUBP2Q9Y5Y2 271 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 SLC25A15Q9Y619 301 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 COL6A5A8TX70 2615 aa4.57□□□□□ -1.68
SHMT1-211ENST00000618902 A0A096LPE4 126 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 TEX13CA0A0J9YWL9 993 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.56□□□□□ -1.68
SHMT1-211ENST00000618902 A0A1W2PPZ6 126 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 A0A1W2PRG6 482 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 SLC22A23A1A5C7 686 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 OR6C68A6NDL8 312 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 DPRXA6NFQ7 191 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF726A6NNF4 738 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 NOTOA8MTQ0 251 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF879B4DU55 563 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 INMT-MINDY4F8WBC2 141 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 DCTN6O00399 190 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 GABRPO00591 440 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 BHLHE40O14503 412 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 ARPC3O15145 178 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 PLA2G10O15496 165 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 OGG1O15527 345 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 GSTZ1O43708 216 aaPredicted RBP4.56□□□□□ -1.68
SHMT1-211ENST00000618902 SMPD2O60906 423 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 KRT33AO76009 404 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 PLAUP00749 431 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 CELA3BP08861 270 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 QDPRP09417 244 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 PATE4P0C8F1 98 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 PSKH1P11801 424 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 APEHP13798 732 aaKnown RBP4.56□□□□□ -1.68
SHMT1-211ENST00000618902 HIST1H1CP16403 213 aaKnown RBP4.56□□□□□ -1.68
SHMT1-211ENST00000618902 CTLA4P16410 223 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 TUBG1P23258 451 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 SLC6A1P30531 599 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 SLC6A6P31641 620 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 CDAP32320 146 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 ARR3P36575 388 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 ACVR1BP36896 505 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 TGFBR1P36897 503 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 MMP15P51511 669 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 GBX2P52951 348 aaPredicted RBP4.56□□□□□ -1.68
SHMT1-211ENST00000618902 ART1P52961 327 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 BLVRAP53004 296 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 RIPPLY3P57055 190 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 RRAS2P62070 204 aaPredicted RBP4.56□□□□□ -1.68
SHMT1-211ENST00000618902 IFITM2Q01629 132 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 IL18Q14116 193 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 TBRG1Q3YBR2 411 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF672Q499Z4 452 aaPredicted RBP4.56□□□□□ -1.68
SHMT1-211ENST00000618902 CLEC12AQ5QGZ9 265 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 CD276Q5ZPR3 534 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 RPL22L1Q6P5R6 122 aaKnown RBP4.56□□□□□ -1.68
SHMT1-211ENST00000618902 ANKRD16Q6P6B7 361 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 DPY19L2P2Q6ZN68 376 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF704Q6ZNC4 412 aaPredicted RBP4.56□□□□□ -1.68
SHMT1-211ENST00000618902 BIVMQ86UB2 503 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 DTX2Q86UW9 622 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 ZBTB46Q86UZ6 589 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 WFDC8Q8IUA0 241 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 TGIF2LYQ8IUE0 185 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 LURAP1LQ8IV03 231 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 LAX1Q8IWV1 398 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 GPR137CQ8N3F9 429 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 OR4F15Q8NGB8 312 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 OR1K1Q8NGR3 316 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 OR6N1Q8NGY5 312 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 OR52N5Q8NH56 324 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 FANK1Q8TC84 345 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 IGFBPL1Q8WX77 278 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 RAB40AQ8WXH6 277 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 NANOS1Q8WY41 292 aaKnown RBP4.56□□□□□ -1.68
SHMT1-211ENST00000618902 AKAP1Q92667 903 aaKnown RBP eCLIP4.56□□□□□ -1.68
SHMT1-211ENST00000618902 NEUROG1Q92886 237 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 RFT1Q96AA3 541 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 NABP1Q96AH0 204 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF75AQ96N20 296 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 FOXN4Q96NZ1 517 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 TSSK2Q96PF2 358 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 CCL19Q99731 98 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 ATF6BQ99941 703 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 TMEM246Q9BRR3 403 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF649Q9BS31 505 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 THAP7Q9BT49 309 aaPredicted RBP4.56□□□□□ -1.68
SHMT1-211ENST00000618902 ALG12Q9BV10 488 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 C1QTNF6Q9BXI9 259 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 C11orf54Q9H0W9 315 aaPredicted RBP4.56□□□□□ -1.68
SHMT1-211ENST00000618902 MIXL1Q9H2W2 232 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 DPAGT1Q9H3H5 408 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 CRLF2Q9HC73 371 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 MYOZ1Q9NP98 299 aaPredicted RBP4.56□□□□□ -1.68
SHMT1-211ENST00000618902 EMC7Q9NPA0 242 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 SLC17A5Q9NRA2 495 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 TUBG2Q9NRH3 451 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 C14orf119Q9NWQ9 140 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 B3GNT2Q9NY97 397 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 TAS2R8Q9NYW2 309 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 COMMD3Q9UBI1 195 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 MOKQ9UQ07 419 aa4.56□□□□□ -1.68
SHMT1-211ENST00000618902 ARFGEF3Q5TH69 2177 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms