RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 RRAGDQ9NQL2 400 aaPredicted RBP5.26□□□□□ -1.57
SCAMP1-206ENST00000618166 TUBG2Q9NRH3 451 aa5.26□□□□□ -1.57
SCAMP1-206ENST00000618166 C19orf12Q9NSK7 152 aa5.26□□□□□ -1.57
SCAMP1-206ENST00000618166 SNTG1Q9NSN8 517 aa5.26□□□□□ -1.57
SCAMP1-206ENST00000618166 SLC25A10Q9UBX3 287 aaPredicted RBP5.26□□□□□ -1.57
SCAMP1-206ENST00000618166 ZNF391Q9UJN7 358 aa5.26□□□□□ -1.57
SCAMP1-206ENST00000618166 TIMM10BQ9Y5J6 103 aa5.26□□□□□ -1.57
SCAMP1-206ENST00000618166 VPS13BQ7Z7G8 4022 aa5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 FLG2Q5D862 2391 aaPredicted RBP5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 A0A1B0GWA3 101 aa5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 MAGEA13PA6NCF6 341 aa5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 A6NLC8 198 aa5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 SLC28A1O00337 649 aa5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 PTBP3O95758 552 aaKnown RBP5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 MBD3O95983 291 aa5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 CCL3L1P16619 93 aa5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 ECHS1P30084 290 aa5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 SERPINB8P50452 374 aa5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 GABPB1Q06547 395 aaPredicted RBP5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 TRAP1Q12931 704 aaKnown RBP5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 GNA13Q14344 377 aa5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 OR8G1Q15617 311 aa5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 MICBQ29980 383 aa5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 GALNTL6Q49A17 601 aa5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 FAM27BQ5VT28 67 aa5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 STUMQ69YW2 141 aa5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 LINC00322Q6ZN03 302 aaPredicted RBP5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 CCDC91Q7Z6B0 441 aa5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 DHDDSQ86SQ9 333 aa5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 CATSPERDQ86XM0 798 aa5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 EME1Q96AY2 570 aa5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 FOXRED1Q96CU9 486 aaPredicted RBP5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 NMD3Q96D46 503 aaKnown RBP5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 TRNT1Q96Q11 434 aaKnown RBP5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 SEPHS2Q99611 448 aa5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 MRPL57Q9BQC6 102 aaKnown RBP5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 TRIM31Q9BZY9 425 aa5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 TUBA4BQ9H853 241 aa5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 HEXA-AS1Q9H8Q6 139 aa5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 ZNF443Q9Y2A4 671 aaPredicted RBP5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 CEPT1Q9Y6K0 416 aa5.25□□□□□ -1.57
SCAMP1-206ENST00000618166 A0A0J9YWU9 116 aa5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 LINC01548A6NM66 108 aa5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 EPM2AB3EWF7 344 aa5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 CCRL2O00421 344 aa5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 RNF13O43567 381 aa5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 TRMUO75648 421 aaKnown RBP5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 SEC31AO94979 1220 aaKnown RBP5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 AGR2O95994 175 aa5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 CST2P09228 141 aa5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 ZNF133P52736 654 aaPredicted RBP5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 UAP1Q16222 522 aaPredicted RBP5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 LIN52Q52LA3 116 aa5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 CAVIN1Q6NZI2 390 aaKnown RBP5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 LRRC74BQ6ZQY2 392 aa5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 TMEM139Q8IV31 216 aa5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 C11orf53Q8IXP5 236 aa5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 OR4A15Q8NGL6 344 aa5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 OR6Q1Q8NGQ2 317 aa5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 OR5J2Q8NH18 312 aa5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 BBS10Q8TAM1 723 aa5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 TCP10LQ8TDR4 215 aa5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 LRRC29Q8WV35 223 aa5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 RNF183Q96D59 192 aa5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 ADAT1Q9BUB4 502 aaKnown RBP5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 TUBB1Q9H4B7 451 aa5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 MTHFD2LQ9H903 347 aaPredicted RBP5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 EMC7Q9NPA0 242 aa5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 TBL2Q9Y4P3 447 aaKnown RBP5.24□□□□□ -1.57
SCAMP1-206ENST00000618166 MEX3AA1L020 520 aaKnown RBP5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 HTR3EA5X5Y0 456 aa5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 SERPINE3A8MV23 424 aa5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 M0R2N4 97 aa5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 OVOL1O14753 267 aa5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 LSM1O15116 133 aaKnown RBP5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 OR2F2O95006 317 aa5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 TFAP2AP05549 437 aa5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 LINC00032P0C843 101 aa5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 MUC1P15941 1255 aaPredicted RBP5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 IMPDH1P20839 514 aa5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 MAGEA12P43365 314 aa5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 CDX1P47902 265 aaPredicted RBP5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 CSNK2BP67870 215 aa5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 PGS1Q32NB8 556 aa5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 ALG10BQ5I7T1 473 aa5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 OR4F3Q6IEY1 312 aa5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 C5orf46Q6UWT4 87 aa5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 BAIAP2L2Q6UXY1 529 aa5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 CYS1Q717R9 158 aa5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 C16orf82Q7Z2V1 217 aa5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 WDR86Q86TI4 376 aa5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 ANKRD46Q86W74 232 aa5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 PEX5LQ8IYB4 626 aa5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 DRAM1Q8N682 238 aa5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 CHPT1Q8WUD6 406 aa5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 PHLDA1Q8WV24 401 aaPredicted RBP5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 C4orf3Q8WVX3 66 aa5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 CAPSLQ8WWF8 208 aa5.23□□□□□ -1.57
SCAMP1-206ENST00000618166 ARPC1AQ92747 370 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms