RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 PDCD1Q15116 288 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 ZNF141Q15928 474 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 CPEB2Q7Z5Q1 589 aaKnown RBP9.28□□□□□ -0.92
CTCFL-216ENST00000608263 SLC43A2Q8N370 569 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 PRR18Q8N4B5 295 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 ZNF485Q8NCK3 441 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 SOSTQ9BQB4 213 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 UTP23Q9BRU9 249 aaKnown RBP9.28□□□□□ -0.92
CTCFL-216ENST00000608263 WWTR1Q9GZV5 400 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 LAT2Q9GZY6 243 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.28□□□□□ -0.92
CTCFL-216ENST00000608263 UBE2J1Q9Y385 318 aaPredicted RBP9.28□□□□□ -0.92
CTCFL-216ENST00000608263 MTCL1Q9Y4B5 1905 aaKnown RBP9.28□□□□□ -0.92
CTCFL-216ENST00000608263 LAMA3Q16787 3333 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 C1orf196B1AJZ1 125 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 K7EPK0 472 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 HSPA12AO43301 675 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 MGMTP16455 207 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 CSNK1A1P48729 337 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 CASP6P55212 293 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 MTCP1P56278 107 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 PEA15Q15121 130 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 C11orf87Q6NUJ2 197 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 CLEC9AQ6UXN8 241 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.28□□□□□ -0.92
CTCFL-216ENST00000608263 SPICQ8N5J4 248 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 FAM71E2Q8N5Q1 922 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 RNF141Q8WVD5 230 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 PNPLA2Q96AD5 504 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 DNTTIP1Q9H147 329 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 C12orf10Q9HB07 376 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 ZNF629Q9UEG4 869 aaPredicted RBP9.28□□□□□ -0.92
CTCFL-216ENST00000608263 FOXS1O43638 330 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 EPHA1P21709 976 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 NXPH1P58417 271 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 TAS2R31P59538 309 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 GABREP78334 506 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 C17orf67Q0P5P2 114 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 PLEKHN1Q494U1 663 aaPredicted RBP9.28□□□□□ -0.92
CTCFL-216ENST00000608263 ZNF658BQ4V348 819 aaPredicted RBP9.28□□□□□ -0.92
CTCFL-216ENST00000608263 ATG4DQ86TL0 474 aaPredicted RBP9.28□□□□□ -0.92
CTCFL-216ENST00000608263 STPG2Q8N412 459 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 C11orf40Q8WZ69 217 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 HGDQ93099 445 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 LRFN5Q96NI6 719 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 ZNF649Q9BS31 505 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 PUS1Q9Y606 427 aaKnown RBP eCLIP9.28□□□□□ -0.92
CTCFL-216ENST00000608263 R4GMQ9 66 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 ARPC4-TTLL3A0A0A6YYG9 625 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 SNAPINO95295 136 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 DMWDQ09019 674 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 CLINT1Q14677 625 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 GNMTQ14749 295 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 PPA1Q15181 289 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 GAB4Q2WGN9 574 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 DEFB109BQ30KR1 87 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 MOGAT2Q3SYC2 334 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 ATPAF1Q5TC12 328 aaPredicted RBP9.28□□□□□ -0.92
CTCFL-216ENST00000608263 YRDCQ86U90 279 aaKnown RBP9.28□□□□□ -0.92
CTCFL-216ENST00000608263 CADM4Q8NFZ8 388 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 KCNG3Q8TAE7 436 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 RGP1Q92546 391 aaPredicted RBP9.28□□□□□ -0.92
CTCFL-216ENST00000608263 BORCS8Q96FH0 119 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 CNTD2Q9H8S5 307 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 SLC22A11Q9NSA0 550 aa9.28□□□□□ -0.92
CTCFL-216ENST00000608263 IGHV1OR21-1A0A087WYE8 117 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 PRR32B1ATL7 298 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 YKT6O15498 198 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 RAD51DO75771 328 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 OR7C1O76099 320 aaPredicted RBP9.27□□□□□ -0.93
CTCFL-216ENST00000608263 OR2F2O95006 317 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 MT-ATP6P00846 226 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 CNR1P21554 472 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 KIR3DL2P43630 455 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 GPR3P46089 330 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 SSR4P51571 173 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 SLC25A1P53007 311 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 DCAF7P61962 342 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 FOXF1Q12946 379 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 OR2F1Q13607 317 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 FAM189A2Q15884 450 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 TAF9Q16594 264 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 PAN3Q58A45 887 aaKnown RBP9.27□□□□□ -0.93
CTCFL-216ENST00000608263 EMC4Q5J8M3 183 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 ADAM5Q6NVV9 412 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 OGFOD3Q6PK18 319 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 C6orf15Q6UXA7 325 aaPredicted RBP9.27□□□□□ -0.93
CTCFL-216ENST00000608263 LYG2Q86SG7 212 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 CBLN2Q8IUK8 224 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 SEH1LQ96EE3 360 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 PBOV1Q9GZY1 135 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 SLCO5A1Q9H2Y9 848 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 NXT1Q9UKK6 140 aaKnown RBP9.27□□□□□ -0.93
CTCFL-216ENST00000608263 NOTCH3Q9UM47 2321 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 TTLL8A6PVC2 850 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 CTDSPLO15194 276 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 RER1O15258 196 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 RRP8O43159 456 aaKnown RBP9.27□□□□□ -0.93
CTCFL-216ENST00000608263 XRCC2O43543 280 aa9.27□□□□□ -0.93
CTCFL-216ENST00000608263 SGCEO43556 437 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms