RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 TBX1O43435 398 aa12.32□□□□□ -0.44
CTSA-216ENST00000607212 NDUFA2O43678 99 aa12.32□□□□□ -0.44
CTSA-216ENST00000607212 IGHV1-69P01742 117 aa12.32□□□□□ -0.44
CTSA-216ENST00000607212 RPS27P42677 84 aaKnown RBP12.32□□□□□ -0.44
CTSA-216ENST00000607212 PRKXP51817 358 aa12.32□□□□□ -0.44
CTSA-216ENST00000607212 GYS2P54840 703 aa12.32□□□□□ -0.44
CTSA-216ENST00000607212 RELBQ01201 579 aa12.32□□□□□ -0.44
CTSA-216ENST00000607212 ZNF92Q03936 586 aa12.32□□□□□ -0.44
CTSA-216ENST00000607212 SNAI3Q3KNW1 292 aa12.32□□□□□ -0.44
CTSA-216ENST00000607212 ZNF826PQ6ZT77 177 aa12.32□□□□□ -0.44
CTSA-216ENST00000607212 BTN2A1Q7KYR7 527 aa12.32□□□□□ -0.44
CTSA-216ENST00000607212 RNF148Q8N7C7 305 aa12.32□□□□□ -0.44
CTSA-216ENST00000607212 DYRK2Q92630 601 aa12.32□□□□□ -0.44
CTSA-216ENST00000607212 PRDM13Q9H4Q3 707 aa12.32□□□□□ -0.44
CTSA-216ENST00000607212 SMURF1Q9HCE7 757 aa12.32□□□□□ -0.44
CTSA-216ENST00000607212 TCF7L1Q9HCS4 588 aa12.32□□□□□ -0.44
CTSA-216ENST00000607212 CENPMQ9NSP4 180 aa12.32□□□□□ -0.44
CTSA-216ENST00000607212 C14orf119Q9NWQ9 140 aa12.32□□□□□ -0.44
CTSA-216ENST00000607212 CYB5R1Q9UHQ9 305 aa12.32□□□□□ -0.44
CTSA-216ENST00000607212 KCNG2Q9UJ96 466 aa12.32□□□□□ -0.44
CTSA-216ENST00000607212 OR6C68A6NDL8 312 aa12.31□□□□□ -0.44
CTSA-216ENST00000607212 ANKRD30BLA7E2S9 258 aa12.31□□□□□ -0.44
CTSA-216ENST00000607212 BHLHE40O14503 412 aa12.31□□□□□ -0.44
CTSA-216ENST00000607212 ARPC3O15145 178 aa12.31□□□□□ -0.44
CTSA-216ENST00000607212 GPR137BO60478 399 aa12.31□□□□□ -0.44
CTSA-216ENST00000607212 IGHV4-59P01825 116 aa12.31□□□□□ -0.44
CTSA-216ENST00000607212 SPARCP09486 303 aa12.31□□□□□ -0.44
CTSA-216ENST00000607212 SLC2A1P11166 492 aa12.31□□□□□ -0.44
CTSA-216ENST00000607212 GRK5P34947 590 aa12.31□□□□□ -0.44
CTSA-216ENST00000607212 KRTAP27-1Q3LI81 207 aa12.31□□□□□ -0.44
CTSA-216ENST00000607212 GLYATL3Q5SZD4 288 aa12.31□□□□□ -0.44
CTSA-216ENST00000607212 HACD2Q6Y1H2 254 aa12.31□□□□□ -0.44
CTSA-216ENST00000607212 ZBTB46Q86UZ6 589 aa12.31□□□□□ -0.44
CTSA-216ENST00000607212 FAM86B1Q8N7N1 296 aa12.31□□□□□ -0.44
CTSA-216ENST00000607212 SPERTQ8NA61 448 aa12.31□□□□□ -0.44
CTSA-216ENST00000607212 OR56B2PQ8NGI1 322 aa12.31□□□□□ -0.44
CTSA-216ENST00000607212 OR51L1Q8NGJ5 315 aa12.31□□□□□ -0.44
CTSA-216ENST00000607212 GNPDA2Q8TDQ7 276 aa12.31□□□□□ -0.44
CTSA-216ENST00000607212 MAP6Q96JE9 813 aa12.31□□□□□ -0.44
CTSA-216ENST00000607212 PKP2Q99959 881 aa12.31□□□□□ -0.44
CTSA-216ENST00000607212 CITED1Q99966 193 aa12.31□□□□□ -0.44
CTSA-216ENST00000607212 DPAGT1Q9H3H5 408 aa12.31□□□□□ -0.44
CTSA-216ENST00000607212 PNRC2Q9NPJ4 139 aaKnown RBP12.31□□□□□ -0.44
CTSA-216ENST00000607212 DCAF13Q9NV06 445 aaKnown RBP12.31□□□□□ -0.44
CTSA-216ENST00000607212 MRPL22Q9NWU5 206 aaKnown RBP12.31□□□□□ -0.44
CTSA-216ENST00000607212 MRPL15Q9P015 296 aaKnown RBP12.31□□□□□ -0.44
CTSA-216ENST00000607212 PKD1L1Q8TDX9 2849 aa12.31□□□□□ -0.44
CTSA-216ENST00000607212 A0A0U1RQK1 487 aa12.3□□□□□ -0.44
CTSA-216ENST00000607212 A0A1B0GWJ7 208 aa12.3□□□□□ -0.44
CTSA-216ENST00000607212 DVL1O14640 695 aa12.3□□□□□ -0.44
CTSA-216ENST00000607212 IDH3BO43837 385 aa12.3□□□□□ -0.44
CTSA-216ENST00000607212 ECDO95905 644 aaPredicted RBP12.3□□□□□ -0.44
CTSA-216ENST00000607212 DHRS7BQ6IAN0 325 aaPredicted RBP12.3□□□□□ -0.44
CTSA-216ENST00000607212 DRAM2Q6UX65 266 aa12.3□□□□□ -0.44
CTSA-216ENST00000607212 DCXRQ7Z4W1 244 aa12.3□□□□□ -0.44
CTSA-216ENST00000607212 CYB561A3Q8NBI2 242 aa12.3□□□□□ -0.44
CTSA-216ENST00000607212 OR2T4Q8NH00 348 aa12.3□□□□□ -0.44
CTSA-216ENST00000607212 LRRC29Q8WV35 223 aa12.3□□□□□ -0.44
CTSA-216ENST00000607212 LRTOMTQ8WZ04 291 aa12.3□□□□□ -0.44
CTSA-216ENST00000607212 CMTM5Q96DZ9 223 aa12.3□□□□□ -0.44
CTSA-216ENST00000607212 PYURFQ96I23 114 aa12.3□□□□□ -0.44
CTSA-216ENST00000607212 C7orf34Q96L11 122 aa12.3□□□□□ -0.44
CTSA-216ENST00000607212 RBM4BQ9BQ04 359 aaKnown RBP12.3□□□□□ -0.44
CTSA-216ENST00000607212 SPAG4Q9NPE6 437 aa12.3□□□□□ -0.44
CTSA-216ENST00000607212 DNAJB11Q9UBS4 358 aa12.3□□□□□ -0.44
CTSA-216ENST00000607212 CAB39Q9Y376 341 aaPredicted RBP12.3□□□□□ -0.44
CTSA-216ENST00000607212 A0A0G2JK05 382 aa12.29□□□□□ -0.44
CTSA-216ENST00000607212 A0A1W2PRD5 423 aa12.29□□□□□ -0.44
CTSA-216ENST00000607212 A0A1W2PRF3 423 aa12.29□□□□□ -0.44
CTSA-216ENST00000607212 A0A1W2PRM7 423 aa12.29□□□□□ -0.44
CTSA-216ENST00000607212 FABP3P05413 133 aa12.29□□□□□ -0.44
CTSA-216ENST00000607212 ANXA2P07355 339 aaKnown RBP12.29□□□□□ -0.44
CTSA-216ENST00000607212 MMP9P14780 707 aa12.29□□□□□ -0.44
CTSA-216ENST00000607212 RRM2P31350 389 aa12.29□□□□□ -0.44
CTSA-216ENST00000607212 GMFBP60983 142 aa12.29□□□□□ -0.44
CTSA-216ENST00000607212 RPL15P61313 204 aaKnown RBP12.29□□□□□ -0.44
CTSA-216ENST00000607212 TAF9Q16594 264 aa12.29□□□□□ -0.44
CTSA-216ENST00000607212 TIGD6Q17RP2 521 aa12.29□□□□□ -0.44
CTSA-216ENST00000607212 MICBQ29980 383 aa12.29□□□□□ -0.44
CTSA-216ENST00000607212 HSP90B2PQ58FF3 399 aa12.29□□□□□ -0.44
CTSA-216ENST00000607212 C8orf82Q6P1X6 216 aaPredicted RBP12.29□□□□□ -0.44
CTSA-216ENST00000607212 GDPGP1Q6ZNW5 385 aa12.29□□□□□ -0.44
CTSA-216ENST00000607212 DPY19L4Q7Z388 723 aa12.29□□□□□ -0.44
CTSA-216ENST00000607212 VMO1Q7Z5L0 202 aa12.29□□□□□ -0.44
CTSA-216ENST00000607212 FAM90A1Q86YD7 464 aa12.29□□□□□ -0.44
CTSA-216ENST00000607212 C1QL4Q86Z23 238 aa12.29□□□□□ -0.44
CTSA-216ENST00000607212 CMTM4Q8IZR5 234 aa12.29□□□□□ -0.44
CTSA-216ENST00000607212 PLPP7Q8NBV4 271 aa12.29□□□□□ -0.44
CTSA-216ENST00000607212 FAM110DQ8TAY7 271 aaPredicted RBP12.29□□□□□ -0.44
CTSA-216ENST00000607212 DHRS1Q96LJ7 313 aa12.29□□□□□ -0.44
CTSA-216ENST00000607212 SIRPDQ9H106 197 aa12.29□□□□□ -0.44
CTSA-216ENST00000607212 EGLN3Q9H6Z9 239 aa12.29□□□□□ -0.44
CTSA-216ENST00000607212 CNTD2Q9H8S5 307 aa12.29□□□□□ -0.44
CTSA-216ENST00000607212 ABCD2Q9UBJ2 740 aa12.29□□□□□ -0.44
CTSA-216ENST00000607212 XRCC2O43543 280 aa12.28□□□□□ -0.44
CTSA-216ENST00000607212 PAHP00439 452 aa12.28□□□□□ -0.44
CTSA-216ENST00000607212 EEF1B2P24534 225 aaKnown RBP12.28□□□□□ -0.44
CTSA-216ENST00000607212 HSD11B1P28845 292 aa12.28□□□□□ -0.44
CTSA-216ENST00000607212 IER3P46695 156 aa12.28□□□□□ -0.44
CTSA-216ENST00000607212 IKZF1Q13422 519 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms