RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 ZNF826PQ6ZT77 177 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 DCXRQ7Z4W1 244 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 ZDHHC21Q8IVQ6 265 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 LNX2Q8N448 690 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 PNLDC1Q8NA58 520 aaKnown RBP10.91□□□□□ -0.66
RPS28-204ENST00000602140 OR56B2PQ8NGI1 322 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 OR9Q1Q8NGQ5 310 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 OR4F5Q8NH21 305 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 WDFY2Q96P53 400 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 TBX15Q96SF7 602 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 COPS4Q9BT78 406 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 CHIAQ9BZP6 476 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 FAM107BQ9H098 131 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 BEX1Q9HBH7 125 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 SMURF1Q9HCE7 757 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 MED4Q9NPJ6 270 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 CENPMQ9NSP4 180 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 C1orf123Q9NWV4 160 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 MRPL15Q9P015 296 aaKnown RBP10.91□□□□□ -0.66
RPS28-204ENST00000602140 CD300AQ9UGN4 299 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 N6AMT1Q9Y5N5 214 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 CDH10Q9Y6N8 788 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 CENPVL3A0A0U1RRI6 287 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 A0A1B0GUS0 222 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 hCG_1807616A0A1W2PRN6 198 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 A6NLC8 198 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 NDUFA2O43678 99 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 MELTFP08582 738 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 SPARCP09486 303 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 SLC2A1P11166 492 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 RELBQ01201 579 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 POU4F2Q12837 409 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 TAF13Q15543 124 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 ZNF362Q5T0B9 420 aaPredicted RBP10.9□□□□□ -0.66
RPS28-204ENST00000602140 METTL11BQ5VVY1 283 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 RPL13AP3Q6NVV1 102 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 PGAM4Q8N0Y7 254 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 SPERTQ8NA61 448 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 OR9Q2Q8NGE9 314 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 OR4C15Q8NGM1 316 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 WFDC12Q8WWY7 111 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 GATAD2BQ8WXI9 593 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 SLAMF6Q96DU3 332 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 FAM71F1Q96KD3 344 aaPredicted RBP10.9□□□□□ -0.66
RPS28-204ENST00000602140 CDRT15Q96T59 188 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 KCNJ15Q99712 375 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 BTBD10Q9BSF8 475 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 TRIM36Q9NQ86 728 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 C1RLQ9NZP8 487 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 COMMD3-BMI1R4GMX3 469 aa10.9□□□□□ -0.66
RPS28-204ENST00000602140 IGHV3OR15-7A0A075B7D8 119 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.89□□□□□ -0.67
RPS28-204ENST00000602140 DVL1O14640 695 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 FCN3O75636 299 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 KRT36O76013 467 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 GYPBP06028 91 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 FMO3P31513 532 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 ENTPD1P49961 510 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 HMGA2P52926 109 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 ARF6P62330 175 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 OLFML2AQ68BL7 652 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 C17orf107Q6ZR85 190 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 BTN2A1Q7KYR7 527 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 FAM90A1Q86YD7 464 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 TMEM86BQ8N661 226 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 GCSAMQ8N6F7 178 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 ZNF511Q8NB15 262 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 SLC37A3Q8NCC5 494 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 OR8D4Q8NGM9 314 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 LHX4Q969G2 390 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 SIRPDQ9H106 197 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 OPA3Q9H6K4 179 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 ACOXLQ9NUZ1 547 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 C14orf119Q9NWQ9 140 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 IL20Q9NYY1 176 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 PDP1Q9P0J1 537 aaPredicted RBP10.89□□□□□ -0.67
RPS28-204ENST00000602140 LYVE1Q9Y5Y7 322 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 POMT1Q9Y6A1 747 aa10.89□□□□□ -0.67
RPS28-204ENST00000602140 IGHV1-69DA0A0B4J2H0 117 aa10.88□□□□□ -0.67
RPS28-204ENST00000602140 ZNF878C9JN71 531 aa10.88□□□□□ -0.67
RPS28-204ENST00000602140 TNFRSF11BO00300 401 aa10.88□□□□□ -0.67
RPS28-204ENST00000602140 ZNF593O00488 134 aaPredicted RBP10.88□□□□□ -0.67
RPS28-204ENST00000602140 XRCC2O43543 280 aa10.88□□□□□ -0.67
RPS28-204ENST00000602140 SNX3O60493 162 aa10.88□□□□□ -0.67
RPS28-204ENST00000602140 NDUFA7O95182 113 aa10.88□□□□□ -0.67
RPS28-204ENST00000602140 LHBP01229 141 aa10.88□□□□□ -0.67
RPS28-204ENST00000602140 GASTP01350 101 aa10.88□□□□□ -0.67
RPS28-204ENST00000602140 IGHV1-69P01742 117 aa10.88□□□□□ -0.67
RPS28-204ENST00000602140 MZT1Q08AG7 82 aa10.88□□□□□ -0.67
RPS28-204ENST00000602140 CRMP1Q14194 572 aa10.88□□□□□ -0.67
RPS28-204ENST00000602140 PDCD1Q15116 288 aa10.88□□□□□ -0.67
RPS28-204ENST00000602140 PCK2Q16822 640 aa10.88□□□□□ -0.67
RPS28-204ENST00000602140 PDLIM3Q53GG5 364 aaPredicted RBP10.88□□□□□ -0.67
RPS28-204ENST00000602140 RASSF6Q6ZTQ3 369 aa10.88□□□□□ -0.67
RPS28-204ENST00000602140 PDZD9Q8IXQ8 264 aa10.88□□□□□ -0.67
RPS28-204ENST00000602140 TBC1D15Q8TC07 691 aa10.88□□□□□ -0.67
RPS28-204ENST00000602140 SSMEM1Q8WWF3 244 aa10.88□□□□□ -0.67
RPS28-204ENST00000602140 TSSK6Q9BXA6 273 aa10.88□□□□□ -0.67
RPS28-204ENST00000602140 TRIM15Q9C019 465 aa10.88□□□□□ -0.67
RPS28-204ENST00000602140 TBC1D23Q9NUY8 699 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms