RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 OR1D4P47884 311 aa16.33■□□□□ 0.2
UPF1-210ENST00000600689 C5orf66Q9H5L9 145 aa16.33■□□□□ 0.2
UPF1-210ENST00000600689 F8VVB4 439 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 F8VWA3 439 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 TXNDC12O95881 172 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 MRPS21P82921 87 aaKnown RBP16.32■□□□□ 0.2
UPF1-210ENST00000600689 TEX30Q5JUR7 227 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 FAM24BQ8N5W8 94 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 SMCO4Q9NRQ5 59 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 RAB22AQ9UL26 194 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 LSM5Q9Y4Y9 91 aaKnown RBP16.32■□□□□ 0.2
UPF1-210ENST00000600689 C2CD4DB7Z1M9 353 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 SYT7O43581 403 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 IGFBP3P17936 291 aaPredicted RBP16.32■□□□□ 0.2
UPF1-210ENST00000600689 BCKDHBP21953 392 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 FHITP49789 147 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 CAV2P51636 162 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 MAMDC2Q7Z304 686 aaPredicted RBP16.32■□□□□ 0.2
UPF1-210ENST00000600689 WDFY1Q8IWB7 410 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 SLC26A10Q8NG04 563 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 CD300LFQ8TDQ1 290 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 HIST1H2BAQ96A08 127 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 TMEM100Q9NV29 134 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 TNFRSF10CO14798 259 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 ZNF217O75362 1048 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 GLO1Q04760 184 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 C16orf47Q6ZP98 133 aaPredicted RBP16.32■□□□□ 0.2
UPF1-210ENST00000600689 PGAP1Q75T13 922 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.32■□□□□ 0.2
UPF1-210ENST00000600689 ZDHHC22Q8N966 263 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 OR6S1Q8NH40 331 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.32■□□□□ 0.2
UPF1-210ENST00000600689 RLN3Q8WXF3 142 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 ASB17Q8WXJ9 295 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 KIRREL1Q96J84 757 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 MAP3K3Q99759 626 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 PDE7BQ9NP56 450 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 SLC2A4RGQ9NR83 387 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 R4GMQ9 66 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 LRP4O75096 1905 aa16.32■□□□□ 0.2
UPF1-210ENST00000600689 IGLV1-36A0A0B4J1U3 117 aa16.31■□□□□ 0.2
UPF1-210ENST00000600689 S100A12P80511 92 aa16.31■□□□□ 0.2
UPF1-210ENST00000600689 EMC4Q5J8M3 183 aa16.31■□□□□ 0.2
UPF1-210ENST00000600689 C9orf152Q5JTZ5 239 aa16.31■□□□□ 0.2
UPF1-210ENST00000600689 SMRP1Q8NCR6 262 aa16.31■□□□□ 0.2
UPF1-210ENST00000600689 TMEM230Q96A57 120 aa16.31■□□□□ 0.2
UPF1-210ENST00000600689 GPER1Q99527 375 aa16.31■□□□□ 0.2
UPF1-210ENST00000600689 TBL1XR1Q9BZK7 514 aa16.31■□□□□ 0.2
UPF1-210ENST00000600689 EIF5A2Q9GZV4 153 aaKnown RBP16.31■□□□□ 0.2
UPF1-210ENST00000600689 SOHLH2Q9NX45 425 aa16.31■□□□□ 0.2
UPF1-210ENST00000600689 LDLRAD4O15165 306 aa16.31■□□□□ 0.2
UPF1-210ENST00000600689 C1QL1O75973 258 aa16.31■□□□□ 0.2
UPF1-210ENST00000600689 BGLAPP02818 100 aa16.31■□□□□ 0.2
UPF1-210ENST00000600689 SRSF4Q08170 494 aaKnown RBP16.31■□□□□ 0.2
UPF1-210ENST00000600689 CLINT1Q14677 625 aa16.31■□□□□ 0.2
UPF1-210ENST00000600689 TTLL10Q6ZVT0 673 aa16.31■□□□□ 0.2
UPF1-210ENST00000600689 ZNF440Q8IYI8 595 aa16.31■□□□□ 0.2
UPF1-210ENST00000600689 FAM71F1Q96KD3 344 aaPredicted RBP16.31■□□□□ 0.2
UPF1-210ENST00000600689 MYOZ1Q9NP98 299 aaPredicted RBP16.31■□□□□ 0.2
UPF1-210ENST00000600689 IL12BP29460 328 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 HHEXQ03014 270 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 AWAT1Q58HT5 328 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 ACER2Q5QJU3 275 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 GLIPR1L1Q6UWM5 242 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 TERB2Q8NHR7 220 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 THAP3Q8WTV1 239 aaPredicted RBP16.3■□□□□ 0.2
UPF1-210ENST00000600689 SEC61A2Q9H9S3 476 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 G6PC2Q9NQR9 355 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 CLDN16Q9Y5I7 305 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 MEGF11A6BM72 1044 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 SHISA8B8ZZ34 492 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 OR3A2P47893 321 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 DEFB119Q8N690 84 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 HOXB13Q92826 284 aaPredicted RBP16.3■□□□□ 0.2
UPF1-210ENST00000600689 RAB33BQ9H082 229 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 PLA2G2EQ9NZK7 142 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 FLVCR1Q9Y5Y0 555 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 TNFP01375 233 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 AMY2BP19961 511 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 TMEM128Q5BJH2 165 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 C10orf91Q5T1B1 145 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 IL34Q6ZMJ4 242 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 SHISA6Q6ZSJ9 500 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 OR51E1Q8TCB6 317 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 GPBAR1Q8TDU6 330 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 ELL3Q9HB65 397 aaPredicted RBP16.3■□□□□ 0.2
UPF1-210ENST00000600689 SPACA1Q9HBV2 294 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 MMP17Q9ULZ9 603 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 POLR1DQ9Y2S0 133 aa16.3■□□□□ 0.2
UPF1-210ENST00000600689 CRTAPO75718 401 aaPredicted RBP16.29■□□□□ 0.2
UPF1-210ENST00000600689 GP1BBP13224 206 aa16.29■□□□□ 0.2
UPF1-210ENST00000600689 ZNF93P35789 620 aaPredicted RBP16.29■□□□□ 0.2
UPF1-210ENST00000600689 YPEL5P62699 121 aa16.29■□□□□ 0.2
UPF1-210ENST00000600689 RGCCQ9H4X1 137 aa16.29■□□□□ 0.2
UPF1-210ENST00000600689 CFAP54Q96N23 3096 aa16.29■□□□□ 0.2
UPF1-210ENST00000600689 TRAV36DV7A0A075B6V5 113 aa16.29■□□□□ 0.2
UPF1-210ENST00000600689 A0A1W2PPE2 198 aa16.29■□□□□ 0.2
UPF1-210ENST00000600689 RAD51DO75771 328 aa16.29■□□□□ 0.2
UPF1-210ENST00000600689 LY86O95711 162 aa16.29■□□□□ 0.2
UPF1-210ENST00000600689 OR3A4PP47883 348 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms