RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 GPR157Q5UAW9 335 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 CD276Q5ZPR3 534 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 SFRP4Q6FHJ7 346 aaPredicted RBP8.17□□□□□ -1.1
VRK3-216ENST00000599342 LYPD4Q6UWN0 246 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 LYPD2Q6UXB3 125 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 C9orf139Q6ZV77 190 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 DHFR2Q86XF0 187 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 ARHGAP24Q8N264 748 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 FITM2Q8N6M3 262 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 SPERTQ8NA61 448 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 PLPP7Q8NBV4 271 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 OR56B2PQ8NGI1 322 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 OR8D4Q8NGM9 314 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 OR8S1Q8NH09 359 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 ZDHHC16Q969W1 377 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 DACT3Q96B18 629 aaPredicted RBP8.17□□□□□ -1.1
VRK3-216ENST00000599342 SLAMF6Q96DU3 332 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 C1orf147Q96MC9 270 aaPredicted RBP8.17□□□□□ -1.1
VRK3-216ENST00000599342 DDOQ99489 341 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 ZNF747Q9BV97 191 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 MAGIXQ9H6Y5 334 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 ARMC1Q9NVT9 282 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 C14orf119Q9NWQ9 140 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 U3KQV3 271 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 TCRBV5S2A0A599 114 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 OOEPA6NGQ2 149 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 ANKRD30BLA7E2S9 258 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 B2RBV5 119 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 ADAM20O43506 726 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 NDUFA2O43678 99 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 ANXA2P07355 339 aaKnown RBP8.16□□□□□ -1.1
VRK3-216ENST00000599342 GRPP07492 148 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 PSKH1P11801 424 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 SPI1P17947 270 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 DDOSTP39656 456 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 PSMB10P40306 273 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 CX3CR1P49238 355 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 SLC25A1P53007 311 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 GYS2P54840 703 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 BPIFB3P59826 476 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 FGF12P61328 243 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 PPP1R8Q12972 351 aaKnown RBP8.16□□□□□ -1.1
VRK3-216ENST00000599342 EIF2B1Q14232 305 aaKnown RBP8.16□□□□□ -1.1
VRK3-216ENST00000599342 SLC9A3R2Q15599 337 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 TIGD6Q17RP2 521 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 MICAQ29983 383 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 OR2T5Q6IEZ7 315 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 ZNF770Q6IQ21 691 aaPredicted RBP8.16□□□□□ -1.1
VRK3-216ENST00000599342 LCN8Q6JVE9 175 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 BRD3OSQ6XYD6 125 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 SPATC1Q76KD6 591 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 PIGWQ7Z7B1 504 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 ZNF511Q8NB15 262 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 OR2T29Q8NH02 315 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 OR4Q3Q8NH05 313 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 TEX47Q8TBZ9 253 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 ZNRF4Q8WWF5 429 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 LRGUKQ96M69 825 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 PCGF1Q9BSM1 259 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 TOR3AQ9H497 397 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 SP140LQ9H930 580 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 UNKLQ9H9P5 680 aaKnown RBP8.16□□□□□ -1.1
VRK3-216ENST00000599342 C1orf123Q9NWV4 160 aa8.16□□□□□ -1.1
VRK3-216ENST00000599342 MDFIC2A0A1B0GVS7 189 aa8.15□□□□□ -1.1
VRK3-216ENST00000599342 DHRS12A0PJE2 317 aa8.15□□□□□ -1.1
VRK3-216ENST00000599342 C22orf46C9J442 243 aa8.15□□□□□ -1.1
VRK3-216ENST00000599342 H3BN98 237 aa8.15□□□□□ -1.1
VRK3-216ENST00000599342 TMPRSS2O15393 492 aa8.15□□□□□ -1.1
VRK3-216ENST00000599342 HOXA3O43365 443 aaPredicted RBP8.15□□□□□ -1.1
VRK3-216ENST00000599342 TOX4O94842 621 aa8.15□□□□□ -1.1
VRK3-216ENST00000599342 PTBP3O95758 552 aaKnown RBP8.15□□□□□ -1.1
VRK3-216ENST00000599342 APOC1P02654 83 aa8.15□□□□□ -1.1
VRK3-216ENST00000599342 LIPFP07098 398 aa8.15□□□□□ -1.1
VRK3-216ENST00000599342 CLUP10909 449 aa8.15□□□□□ -1.1
VRK3-216ENST00000599342 PAICSP22234 425 aaKnown RBP8.15□□□□□ -1.1
VRK3-216ENST00000599342 GRK5P34947 590 aa8.15□□□□□ -1.1
VRK3-216ENST00000599342 HOXA4Q00056 320 aaPredicted RBP8.15□□□□□ -1.1
VRK3-216ENST00000599342 PCK2Q16822 640 aa8.15□□□□□ -1.1
VRK3-216ENST00000599342 TEX30Q5JUR7 227 aa8.15□□□□□ -1.1
VRK3-216ENST00000599342 ZNF362Q5T0B9 420 aaPredicted RBP8.15□□□□□ -1.1
VRK3-216ENST00000599342 METTL11BQ5VVY1 283 aa8.15□□□□□ -1.1
VRK3-216ENST00000599342 ZNF841Q6ZN19 808 aa8.15□□□□□ -1.1
VRK3-216ENST00000599342 ERI1Q8IV48 349 aaKnown RBP8.15□□□□□ -1.1
VRK3-216ENST00000599342 PNLDC1Q8NA58 520 aaKnown RBP8.15□□□□□ -1.1
VRK3-216ENST00000599342 OR10G2Q8NGC3 310 aa8.15□□□□□ -1.1
VRK3-216ENST00000599342 OR6N2Q8NGY6 317 aa8.15□□□□□ -1.1
VRK3-216ENST00000599342 OTULINQ96BN8 352 aa8.15□□□□□ -1.1
VRK3-216ENST00000599342 INTS14Q96SY0 518 aa8.15□□□□□ -1.1
VRK3-216ENST00000599342 DGCR6LQ9BY27 220 aa8.15□□□□□ -1.1
VRK3-216ENST00000599342 NMNAT2Q9BZQ4 307 aa8.15□□□□□ -1.1
VRK3-216ENST00000599342 MARCH7Q9H992 704 aa8.15□□□□□ -1.1
VRK3-216ENST00000599342 CMC2Q9NRP2 79 aa8.15□□□□□ -1.1
VRK3-216ENST00000599342 CTSZQ9UBR2 303 aa8.15□□□□□ -1.1
VRK3-216ENST00000599342 C5orf63A6NC05 138 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 POM121CA8CG34 1229 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 ZNF879B4DU55 563 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 P2RY10O00398 339 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 TIPRLO75663 272 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 GYPAP02724 150 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 CRYBA1P05813 215 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms