RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 WFDC9Q8NEX5 89 aa8.26□□□□□ -1.09
TRIM28-210ENST00000597618 C8orf46Q8TAG6 207 aa8.26□□□□□ -1.09
TRIM28-210ENST00000597618 CCL13Q99616 98 aa8.26□□□□□ -1.09
TRIM28-210ENST00000597618 DCTN5Q9BTE1 182 aa8.26□□□□□ -1.09
TRIM28-210ENST00000597618 NMNAT1Q9HAN9 279 aaPredicted RBP8.26□□□□□ -1.09
TRIM28-210ENST00000597618 C14orf119Q9NWQ9 140 aa8.26□□□□□ -1.09
TRIM28-210ENST00000597618 NKIRAS1Q9NYS0 192 aa8.26□□□□□ -1.09
TRIM28-210ENST00000597618 VSX1Q9NZR4 365 aaPredicted RBP8.26□□□□□ -1.09
TRIM28-210ENST00000597618 DUX4Q9UBX2 424 aa8.26□□□□□ -1.09
TRIM28-210ENST00000597618 PRPF19Q9UMS4 504 aaKnown RBP8.26□□□□□ -1.09
TRIM28-210ENST00000597618 STAB2Q8WWQ8 2551 aa8.26□□□□□ -1.09
TRIM28-210ENST00000597618 ADARB2-AS1A8MUL3 147 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 M0R1W7 72 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 GRPP07492 148 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 FAHP16930 419 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 GRK5P34947 590 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 GGT2P36268 569 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 GZMMP51124 257 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 DLX1P56177 255 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 IKZF1Q13422 519 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 PCK2Q16822 640 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 ZBED5Q49AG3 693 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 LRRC10Q5BKY1 277 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 WDR38Q5JTN6 314 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 GPR139Q6DWJ6 353 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 WDR93Q6P2C0 686 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 DNM1P34Q6PK57 102 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 RNF113BQ8IZP6 322 aaKnown RBP8.25□□□□□ -1.09
TRIM28-210ENST00000597618 OFCC1Q8IZS5 231 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 FAM216BQ8N7L0 139 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 C12orf43Q96C57 262 aaKnown RBP8.25□□□□□ -1.09
TRIM28-210ENST00000597618 C7orf26Q96N11 449 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 PITX2Q99697 317 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 ATF6BQ99941 703 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 CITED2Q99967 270 aaPredicted RBP8.25□□□□□ -1.09
TRIM28-210ENST00000597618 B9D2Q9BPU9 175 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 EBF4Q9BQW3 602 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 NUAK2Q9H093 628 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 RNPEPL1Q9HAU8 725 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 A4GNTQ9UNA3 340 aa8.25□□□□□ -1.09
TRIM28-210ENST00000597618 SF3B6Q9Y3B4 125 aaKnown RBP8.25□□□□□ -1.09
TRIM28-210ENST00000597618 GGT3PA6NGU5 568 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 E9PQ18 207 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 CDC42EP2O14613 210 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 CHST1O43916 411 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 PPP1R3DO95685 299 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 ZNF26P17031 533 aaPredicted RBP8.24□□□□□ -1.09
TRIM28-210ENST00000597618 PAICSP22234 425 aaKnown RBP8.24□□□□□ -1.09
TRIM28-210ENST00000597618 CRABP1P29762 137 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 MDH1P40925 334 aaKnown RBP8.24□□□□□ -1.09
TRIM28-210ENST00000597618 GPR4P46093 362 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 CENPAP49450 140 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 TPTEP56180 551 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 SLC35A2P78381 396 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 BLMHQ13867 455 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 TRAM2Q15035 370 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 MEP1BQ16820 701 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 SLC18B1Q6NT16 456 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 ZNF730Q6ZMV8 503 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 CFAP77Q6ZQR2 320 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 Q8N2B8 174 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 LRRC29Q8WV35 223 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 C17orf50Q8WW18 174 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 LZICQ8WZA0 190 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 H1FXQ92522 213 aaKnown RBP8.24□□□□□ -1.09
TRIM28-210ENST00000597618 RORBQ92753 470 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 NKX3-1Q99801 234 aaPredicted RBP8.24□□□□□ -1.09
TRIM28-210ENST00000597618 FNDC11Q9BVV2 318 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 MEGF9Q9H1U4 602 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 ZNF702PQ9H963 129 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 SERTAD4Q9NUC0 356 aa8.24□□□□□ -1.09
TRIM28-210ENST00000597618 A0A1W2PQ09 198 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 WI2-2373I1.2A0A1W2PRP0 233 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 NKX6-3A6NJ46 265 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 M0R135 149 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 BHLHE40O14503 412 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 SOCS2O14508 198 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 IMPA2O14732 288 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 ACOT8O14734 319 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 PEX14O75381 377 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 NDUFB2O95178 105 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 DUS4LO95620 317 aaKnown RBP8.23□□□□□ -1.09
TRIM28-210ENST00000597618 TGM4P49221 684 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 GSK3BP49841 420 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 BMXP51813 675 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 ELF3P78545 371 aaPredicted RBP8.23□□□□□ -1.09
TRIM28-210ENST00000597618 COL10A1Q03692 680 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 ZNF92Q03936 586 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 DCTN2Q13561 401 aaKnown RBP8.23□□□□□ -1.09
TRIM28-210ENST00000597618 LRRC23Q53EV4 343 aaPredicted RBP8.23□□□□□ -1.09
TRIM28-210ENST00000597618 CYBRD1Q53TN4 286 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 ERICH5Q6P6B1 374 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 TMPRSS11FQ6ZWK6 438 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 MBOAT2Q6ZWT7 520 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 TSEN54Q7Z6J9 526 aaKnown RBP8.23□□□□□ -1.09
TRIM28-210ENST00000597618 NAA40Q86UY6 237 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 LINC00346Q8IVM7 164 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 OR5D13Q8NGL4 314 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 OR2AJ1Q8NGZ0 328 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 WIPF2Q8TF74 440 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms