RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 ACTA1P68133 377 aa16.52■□□□□ 0.23
PNKP-207ENST00000596014 ZNF85Q03923 595 aa16.52■□□□□ 0.23
PNKP-207ENST00000596014 RAB40BQ12829 278 aa16.52■□□□□ 0.23
PNKP-207ENST00000596014 GK2Q14410 553 aaPredicted RBP16.52■□□□□ 0.23
PNKP-207ENST00000596014 MOGQ16653 247 aa16.52■□□□□ 0.23
PNKP-207ENST00000596014 NKPD1Q17RQ9 610 aa16.52■□□□□ 0.23
PNKP-207ENST00000596014 ALKBH6Q3KRA9 238 aa16.52■□□□□ 0.23
PNKP-207ENST00000596014 FAM57BQ71RH2 274 aa16.52■□□□□ 0.23
PNKP-207ENST00000596014 FCGR1BQ92637 280 aa16.52■□□□□ 0.23
PNKP-207ENST00000596014 VRK1Q99986 396 aaPredicted RBP16.52■□□□□ 0.23
PNKP-207ENST00000596014 FUNDC2Q9BWH2 189 aa16.52■□□□□ 0.23
PNKP-207ENST00000596014 SP140LQ9H930 580 aa16.52■□□□□ 0.23
PNKP-207ENST00000596014 BRD7Q9NPI1 651 aa16.52■□□□□ 0.23
PNKP-207ENST00000596014 MRM2Q9UI43 246 aaKnown RBP16.52■□□□□ 0.23
PNKP-207ENST00000596014 GPR160Q9UJ42 338 aa16.52■□□□□ 0.23
PNKP-207ENST00000596014 CHD3Q12873 2000 aaKnown RBP16.52■□□□□ 0.23
PNKP-207ENST00000596014 KITLGP21583 273 aa16.51■□□□□ 0.23
PNKP-207ENST00000596014 RIDAP52758 137 aaKnown RBP16.51■□□□□ 0.23
PNKP-207ENST00000596014 ART1P52961 327 aa16.51■□□□□ 0.23
PNKP-207ENST00000596014 ATP5J2P56134 94 aa16.51■□□□□ 0.23
PNKP-207ENST00000596014 KLHL22Q53GT1 634 aa16.51■□□□□ 0.23
PNKP-207ENST00000596014 ZNF684Q5T5D7 378 aa16.51■□□□□ 0.23
PNKP-207ENST00000596014 SYT6Q5T7P8 510 aaPredicted RBP16.51■□□□□ 0.23
PNKP-207ENST00000596014 ACBD7Q8N6N7 88 aa16.51■□□□□ 0.23
PNKP-207ENST00000596014 OR52H1Q8NGJ2 320 aa16.51■□□□□ 0.23
PNKP-207ENST00000596014 OR2AE1Q8NHA4 323 aa16.51■□□□□ 0.23
PNKP-207ENST00000596014 GGHQ92820 318 aa16.51■□□□□ 0.23
PNKP-207ENST00000596014 DCUN1D5Q9BTE7 237 aa16.51■□□□□ 0.23
PNKP-207ENST00000596014 MS4A5Q9H3V2 200 aa16.51■□□□□ 0.23
PNKP-207ENST00000596014 PURGQ9UJV8 347 aaKnown RBP16.51■□□□□ 0.23
PNKP-207ENST00000596014 ITPR3Q14573 2671 aa16.5■□□□□ 0.23
PNKP-207ENST00000596014 TMEM269A0A1B0GVZ9 245 aa16.5■□□□□ 0.23
PNKP-207ENST00000596014 KRT8P05787 483 aa16.5■□□□□ 0.23
PNKP-207ENST00000596014 NAT2P11245 290 aa16.5■□□□□ 0.23
PNKP-207ENST00000596014 MMP15P51511 669 aa16.5■□□□□ 0.23
PNKP-207ENST00000596014 ZNF92Q03936 586 aa16.5■□□□□ 0.23
PNKP-207ENST00000596014 GLYATL3Q5SZD4 288 aa16.5■□□□□ 0.23
PNKP-207ENST00000596014 SLC16A12Q6ZSM3 486 aa16.5■□□□□ 0.23
PNKP-207ENST00000596014 OR52I1Q8NGK6 324 aa16.5■□□□□ 0.23
PNKP-207ENST00000596014 ZNF319Q9P2F9 582 aa16.5■□□□□ 0.23
PNKP-207ENST00000596014 DAPL1A0PJW8 107 aa16.5■□□□□ 0.23
PNKP-207ENST00000596014 TBX1O43435 398 aa16.5■□□□□ 0.23
PNKP-207ENST00000596014 TIMM8AO60220 97 aaPredicted RBP16.5■□□□□ 0.23
PNKP-207ENST00000596014 SULT1C4O75897 302 aa16.5■□□□□ 0.23
PNKP-207ENST00000596014 PSMB9P28065 219 aa16.5■□□□□ 0.23
PNKP-207ENST00000596014 DYNC1I2Q13409 638 aaKnown RBP16.5■□□□□ 0.23
PNKP-207ENST00000596014 UBE2UQ5VVX9 321 aa16.5■□□□□ 0.23
PNKP-207ENST00000596014 OR2T2Q6IF00 324 aa16.5■□□□□ 0.23
PNKP-207ENST00000596014 ANKRD13BQ86YJ7 626 aa16.5■□□□□ 0.23
PNKP-207ENST00000596014 SNX33Q8WV41 574 aa16.5■□□□□ 0.23
PNKP-207ENST00000596014 SGK3Q96BR1 496 aa16.5■□□□□ 0.23
PNKP-207ENST00000596014 YIPF6Q96EC8 236 aa16.5■□□□□ 0.23
PNKP-207ENST00000596014 PGAM5Q96HS1 289 aa16.5■□□□□ 0.23
PNKP-207ENST00000596014 SORCS2Q96PQ0 1159 aa16.5■□□□□ 0.23
PNKP-207ENST00000596014 REPIN1Q9BWE0 567 aaKnown RBP16.5■□□□□ 0.23
PNKP-207ENST00000596014 RAB1BQ9H0U4 201 aa16.5■□□□□ 0.23
PNKP-207ENST00000596014 CXXC4Q9H2H0 198 aa16.5■□□□□ 0.23
PNKP-207ENST00000596014 CNOT2Q9NZN8 540 aaKnown RBP16.5■□□□□ 0.23
PNKP-207ENST00000596014 EFCAB10A6NFE3 127 aa16.49■□□□□ 0.23
PNKP-207ENST00000596014 METTL15A6NJ78 407 aa16.49■□□□□ 0.23
PNKP-207ENST00000596014 XRCC2O43543 280 aa16.49■□□□□ 0.23
PNKP-207ENST00000596014 GABARAPO95166 117 aa16.49■□□□□ 0.23
PNKP-207ENST00000596014 IGHV4-39P01824 125 aa16.49■□□□□ 0.23
PNKP-207ENST00000596014 IGHA1P01876 353 aa16.49■□□□□ 0.23
PNKP-207ENST00000596014 MMP16P51512 607 aa16.49■□□□□ 0.23
PNKP-207ENST00000596014 PRSS12P56730 875 aa16.49■□□□□ 0.23
PNKP-207ENST00000596014 PLEKHG7Q6ZR37 379 aa16.49■□□□□ 0.23
PNKP-207ENST00000596014 PGAP1Q75T13 922 aa16.49■□□□□ 0.23
PNKP-207ENST00000596014 STX19Q8N4C7 294 aa16.49■□□□□ 0.23
PNKP-207ENST00000596014 YIPF7Q8N8F6 280 aa16.49■□□□□ 0.23
PNKP-207ENST00000596014 BCL7BQ9BQE9 202 aa16.49■□□□□ 0.23
PNKP-207ENST00000596014 FGF20Q9NP95 211 aaPredicted RBP16.49■□□□□ 0.23
PNKP-207ENST00000596014 FAM206AQ9NX38 181 aa16.49■□□□□ 0.23
PNKP-207ENST00000596014 PLSCR5A0PG75 271 aa16.48■□□□□ 0.23
PNKP-207ENST00000596014 ACOD1A6NK06 481 aa16.48■□□□□ 0.23
PNKP-207ENST00000596014 C17orf100A8MU93 164 aa16.48■□□□□ 0.23
PNKP-207ENST00000596014 PNPP00491 289 aa16.48■□□□□ 0.23
PNKP-207ENST00000596014 MT-ND5P03915 603 aa16.48■□□□□ 0.23
PNKP-207ENST00000596014 PIPP12273 146 aaPredicted RBP16.48■□□□□ 0.23
PNKP-207ENST00000596014 LIPAP38571 399 aa16.48■□□□□ 0.23
PNKP-207ENST00000596014 TIGD6Q17RP2 521 aa16.48■□□□□ 0.23
PNKP-207ENST00000596014 ZNF829Q3KNS6 432 aaPredicted RBP16.48■□□□□ 0.23
PNKP-207ENST00000596014 LIPNQ5VXI9 398 aa16.48■□□□□ 0.23
PNKP-207ENST00000596014 MRPL21Q7Z2W9 205 aaKnown RBP16.48■□□□□ 0.23
PNKP-207ENST00000596014 LHFPL3Q86UP9 236 aa16.48■□□□□ 0.23
PNKP-207ENST00000596014 GTF3AQ92664 365 aaKnown RBP16.48■□□□□ 0.23
PNKP-207ENST00000596014 SPSB4Q96A44 273 aa16.48■□□□□ 0.23
PNKP-207ENST00000596014 OR10A2Q9H208 303 aa16.48■□□□□ 0.23
PNKP-207ENST00000596014 TPK1Q9H3S4 243 aa16.48■□□□□ 0.23
PNKP-207ENST00000596014 CYSLTR2Q9NS75 346 aa16.48■□□□□ 0.23
PNKP-207ENST00000596014 CGGBP1Q9UFW8 167 aaPredicted RBP16.48■□□□□ 0.23
PNKP-207ENST00000596014 SRSF10O75494 262 aaKnown RBP16.47■□□□□ 0.23
PNKP-207ENST00000596014 F12P00748 615 aaPredicted RBP16.47■□□□□ 0.23
PNKP-207ENST00000596014 EFNA4P52798 201 aa16.47■□□□□ 0.23
PNKP-207ENST00000596014 IRF3Q14653 427 aa16.47■□□□□ 0.23
PNKP-207ENST00000596014 CDONQ4KMG0 1287 aa16.47■□□□□ 0.23
PNKP-207ENST00000596014 TP53I3Q53FA7 332 aa16.47■□□□□ 0.23
PNKP-207ENST00000596014 OR5AS1Q8N127 324 aa16.47■□□□□ 0.23
PNKP-207ENST00000596014 OR8B12Q8NGG6 310 aa16.47■□□□□ 0.23
PNKP-207ENST00000596014 ZNF649Q9BS31 505 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms