RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 IGHV1-18A0A0C4DH31 117 aa12.74□□□□□ -0.37
SHKBP1-211ENST00000595945 A0A1W2PPK0 400 aa12.74□□□□□ -0.37
SHKBP1-211ENST00000595945 XRCC2O43543 280 aa12.74□□□□□ -0.37
SHKBP1-211ENST00000595945 IGFBP3P17936 291 aaPredicted RBP12.74□□□□□ -0.37
SHKBP1-211ENST00000595945 FSTP19883 344 aa12.74□□□□□ -0.37
SHKBP1-211ENST00000595945 CDSNQ15517 529 aa12.74□□□□□ -0.37
SHKBP1-211ENST00000595945 SSX8Q7RTT4 187 aa12.74□□□□□ -0.37
SHKBP1-211ENST00000595945 PARP16Q8N5Y8 322 aa12.74□□□□□ -0.37
SHKBP1-211ENST00000595945 OR13C3Q8NGS6 347 aa12.74□□□□□ -0.37
SHKBP1-211ENST00000595945 PRR7Q8TB68 274 aa12.74□□□□□ -0.37
SHKBP1-211ENST00000595945 RNASE6Q93091 150 aaKnown RBP12.74□□□□□ -0.37
SHKBP1-211ENST00000595945 ORAI1Q96D31 301 aa12.74□□□□□ -0.37
SHKBP1-211ENST00000595945 C1QTNF6Q9BXI9 259 aa12.74□□□□□ -0.37
SHKBP1-211ENST00000595945 CDH20Q9HBT6 801 aa12.74□□□□□ -0.37
SHKBP1-211ENST00000595945 TBCCD1Q9NVR7 557 aa12.74□□□□□ -0.37
SHKBP1-211ENST00000595945 NPAP1Q9NZP6 1156 aa12.74□□□□□ -0.37
SHKBP1-211ENST00000595945 PMF1-BGLAPU3KQ54 211 aa12.74□□□□□ -0.37
SHKBP1-211ENST00000595945 ICE1Q9Y2F5 2266 aa12.74□□□□□ -0.37
SHKBP1-211ENST00000595945 IGHV2OR16-5A0A0B4J2B6 119 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 A0A0G2JK05 382 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 hCG_38984A0A1B0GV85 526 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 FAM90A27PA6NNH2 459 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 DHRS7CA6NNS2 312 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 DHRS3O75911 302 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 NGFP01138 241 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 CD2P06729 351 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 THBDP07204 575 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 PPP3CBP16298 524 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 ZNF12P17014 697 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 SRMP19623 302 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 CCNOP22674 350 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 MYL9P24844 172 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 TNK1Q13470 666 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 CEP78Q5JTW2 689 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 LRRTM1Q86UE6 522 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 NR2C2APQ86WQ0 139 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 ZNF101Q8IZC7 436 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 OR2AE1Q8NHA4 323 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 AKAP1Q92667 903 aaKnown RBP eCLIP12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 ITFG2Q969R8 447 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 SLC25A46Q96AG3 418 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 MUCL1Q96DR8 90 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 ADAT3Q96EY9 351 aaPredicted RBP12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 REEP6Q96HR9 211 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 FAM71F1Q96KD3 344 aaPredicted RBP12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 GFI1Q99684 422 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 POFUT1Q9H488 388 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 SNTG1Q9NSN8 517 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 FOXJ3Q9UPW0 622 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 STARD10Q9Y365 291 aa12.73□□□□□ -0.37
SHKBP1-211ENST00000595945 ABCA4P78363 2273 aa12.72□□□□□ -0.37
SHKBP1-211ENST00000595945 TRAV8-7A0A075B6U6 113 aa12.72□□□□□ -0.37
SHKBP1-211ENST00000595945 NKX2-6A6NCS4 301 aa12.72□□□□□ -0.37
SHKBP1-211ENST00000595945 CASKO14936 926 aa12.72□□□□□ -0.37
SHKBP1-211ENST00000595945 SMPD2O60906 423 aa12.72□□□□□ -0.37
SHKBP1-211ENST00000595945 CD37P11049 281 aa12.72□□□□□ -0.37
SHKBP1-211ENST00000595945 AGAP20933 346 aa12.72□□□□□ -0.37
SHKBP1-211ENST00000595945 ZNF83P51522 516 aa12.72□□□□□ -0.37
SHKBP1-211ENST00000595945 FAM3AP98173 230 aa12.72□□□□□ -0.37
SHKBP1-211ENST00000595945 ZNF92Q03936 586 aa12.72□□□□□ -0.37
SHKBP1-211ENST00000595945 OR8B8Q15620 311 aa12.72□□□□□ -0.37
SHKBP1-211ENST00000595945 DGUOKQ16854 277 aa12.72□□□□□ -0.37
SHKBP1-211ENST00000595945 GFOD2Q3B7J2 385 aa12.72□□□□□ -0.37
SHKBP1-211ENST00000595945 ZNF529Q6P280 563 aa12.72□□□□□ -0.37
SHKBP1-211ENST00000595945 RFPL4BQ6ZWI9 263 aa12.72□□□□□ -0.37
SHKBP1-211ENST00000595945 KRT74Q7RTS7 529 aa12.72□□□□□ -0.37
SHKBP1-211ENST00000595945 FGGYQ96C11 551 aa12.72□□□□□ -0.37
SHKBP1-211ENST00000595945 C10orf35Q96D05 121 aa12.72□□□□□ -0.37
SHKBP1-211ENST00000595945 SLC30A2Q9BRI3 323 aa12.72□□□□□ -0.37
SHKBP1-211ENST00000595945 REPIN1Q9BWE0 567 aaKnown RBP12.72□□□□□ -0.37
SHKBP1-211ENST00000595945 BARHL1Q9BZE3 327 aa12.72□□□□□ -0.37
SHKBP1-211ENST00000595945 SLIRPQ9GZT3 109 aaKnown RBP12.72□□□□□ -0.37
SHKBP1-211ENST00000595945 NXF2Q9GZY0 626 aaKnown RBP12.72□□□□□ -0.37
SHKBP1-211ENST00000595945 ZCCHC4Q9H5U6 513 aa12.72□□□□□ -0.37
SHKBP1-211ENST00000595945 ANKRD61A6NGH8 418 aa12.71□□□□□ -0.37
SHKBP1-211ENST00000595945 MTRF1O75570 445 aaKnown RBP12.71□□□□□ -0.37
SHKBP1-211ENST00000595945 EPXP11678 715 aa12.71□□□□□ -0.37
SHKBP1-211ENST00000595945 ADRA2CP18825 462 aa12.71□□□□□ -0.37
SHKBP1-211ENST00000595945 CFL1P23528 166 aaKnown RBP12.71□□□□□ -0.37
SHKBP1-211ENST00000595945 ACKR3P25106 362 aa12.71□□□□□ -0.37
SHKBP1-211ENST00000595945 CALCRP30988 508 aa12.71□□□□□ -0.37
SHKBP1-211ENST00000595945 THBS4P35443 961 aa12.71□□□□□ -0.37
SHKBP1-211ENST00000595945 DDOSTP39656 456 aa12.71□□□□□ -0.37
SHKBP1-211ENST00000595945 GSK3AP49840 483 aa12.71□□□□□ -0.37
SHKBP1-211ENST00000595945 NAAAQ02083 359 aa12.71□□□□□ -0.37
SHKBP1-211ENST00000595945 MXD1Q05195 221 aa12.71□□□□□ -0.37
SHKBP1-211ENST00000595945 TFF3Q07654 80 aa12.71□□□□□ -0.37
SHKBP1-211ENST00000595945 GK2Q14410 553 aaPredicted RBP12.71□□□□□ -0.37
SHKBP1-211ENST00000595945 COMMD2Q86X83 199 aa12.71□□□□□ -0.37
SHKBP1-211ENST00000595945 ITLN2Q8WWU7 325 aaPredicted RBP12.71□□□□□ -0.37
SHKBP1-211ENST00000595945 OPA3Q9H6K4 179 aa12.71□□□□□ -0.37
SHKBP1-211ENST00000595945 TAS2R4Q9NYW5 299 aa12.71□□□□□ -0.37
SHKBP1-211ENST00000595945 PTTG3PQ9NZH4 202 aa12.71□□□□□ -0.37
SHKBP1-211ENST00000595945 EIF3KQ9UBQ5 218 aaKnown RBP12.71□□□□□ -0.37
SHKBP1-211ENST00000595945 PLEKHB1Q9UF11 243 aaPredicted RBP12.71□□□□□ -0.37
SHKBP1-211ENST00000595945 A3GALT2U3KPV4 340 aa12.71□□□□□ -0.37
SHKBP1-211ENST00000595945 SPTAN1Q13813 2472 aaKnown RBP12.7□□□□□ -0.38
SHKBP1-211ENST00000595945 M0R1B8 84 aa12.7□□□□□ -0.38
SHKBP1-211ENST00000595945 PDCD5O14737 125 aa12.7□□□□□ -0.38
SHKBP1-211ENST00000595945 RAB3BP20337 219 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms