RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 PCK2Q16822 640 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 C11orf91Q3C1V1 193 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 YIF1BQ5BJH7 314 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 ZMAT1Q5H9K5 638 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 TIMM23BQ5SRD1 257 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 ZNF544Q6NX49 715 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 MZT2AQ6P582 158 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 ESPNLQ6ZVH7 1005 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 SLC35D2Q76EJ3 337 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 SSX8Q7RTT4 187 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 HDDC2Q7Z4H3 204 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 ZNF454Q8N9F8 522 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 OR2V1Q8NHB1 315 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 RNF128Q8TEB7 428 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 MAP6Q96JE9 813 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 OR8B4Q96RC9 309 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 SOSTQ9BQB4 213 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 TTTY10Q9BZA0 68 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 SRRQ9GZT4 340 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 RERGLQ9H628 205 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 SP140LQ9H930 580 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 MRPL22Q9NWU5 206 aaKnown RBP11.08□□□□□ -0.64
SCAF1-202ENST00000595242 DAPK2Q9UIK4 370 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 LAMP5Q9UJQ1 280 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 A0A0J9YW62 118 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 TRBV2A0A0J9YWF9 115 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 TVP23AA6NH52 213 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 AQP7P3A6NL99 342 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 MAGEB4O15481 346 aaPredicted RBP11.07□□□□□ -0.64
SCAF1-202ENST00000595242 RGS5O15539 181 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 TBX1O43435 398 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 TRAF3IP2O43734 574 aaPredicted RBP11.07□□□□□ -0.64
SCAF1-202ENST00000595242 SLC16A7O60669 478 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 OCM2P0CE71 109 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 OCMP0CE72 109 aaPredicted RBP11.07□□□□□ -0.64
SCAF1-202ENST00000595242 OR8G3PP0DMU2 310 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 PSKH1P11801 424 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 IFNGR1P15260 489 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 PTAFRP25105 342 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 SHC1P29353 583 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 CARD18P57730 90 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 NANOS3P60323 173 aaKnown RBP11.07□□□□□ -0.64
SCAF1-202ENST00000595242 RAC1P63000 192 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 POU3F1Q03052 451 aaPredicted RBP11.07□□□□□ -0.64
SCAF1-202ENST00000595242 GLO1Q04760 184 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 ALKBH1Q13686 389 aaKnown RBP11.07□□□□□ -0.64
SCAF1-202ENST00000595242 AWAT1Q58HT5 328 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 STEAP3Q658P3 488 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 TREML4Q6UXN2 200 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 Q6ZT83 130 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 CEACAM19Q7Z692 300 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 PEG10Q86TG7 708 aaKnown RBP11.07□□□□□ -0.64
SCAF1-202ENST00000595242 NR2C2APQ86WQ0 139 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 SLC26A10Q8NG04 563 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 PPP1R14BQ96C90 147 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 DNAJA3Q96EY1 480 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 MRPL13Q9BYD1 178 aaKnown RBP11.07□□□□□ -0.64
SCAF1-202ENST00000595242 BPESC1Q9GZL8 116 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 PPIL3Q9H2H8 161 aaKnown RBP11.07□□□□□ -0.64
SCAF1-202ENST00000595242 TMEM185BQ9H7F4 350 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 ABCB9Q9NP78 766 aa11.07□□□□□ -0.64
SCAF1-202ENST00000595242 TRBV5-5A0A0J9YX44 114 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 TRIM77I1YAP6 450 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 DNPH1O43598 174 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 KHDRBS3O75525 346 aaKnown RBP11.06□□□□□ -0.64
SCAF1-202ENST00000595242 ZNF432O94892 652 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 PTTG1O95997 202 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 CD40P25942 277 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 PSMB10P40306 273 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 ZNF83P51522 516 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 CCR9P51686 369 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 SLC35A1P78382 337 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 TRIM16LQ309B1 348 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 PDSS1Q5T2R2 415 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 SLC18B1Q6NT16 456 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 TMPPEQ6ZT21 453 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 DPY19L4Q7Z388 723 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 SNX29P2Q8IUI4 249 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 GDPD1Q8N9F7 314 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 LINC01356Q8N9X3 169 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 NOXO1Q8NFA2 376 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 OR13C5Q8NGS8 318 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 SETD6Q8TBK2 473 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 ZNF418Q8TF45 676 aaPredicted RBP11.06□□□□□ -0.64
SCAF1-202ENST00000595242 RGP1Q92546 391 aaPredicted RBP11.06□□□□□ -0.64
SCAF1-202ENST00000595242 THRSPQ92748 146 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 OXGR1Q96P68 337 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 SORCS2Q96PQ0 1159 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 KLHL9Q9P2J3 617 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 PRSS50Q9UI38 385 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 ADAM30Q9UKF2 790 aa11.06□□□□□ -0.64
SCAF1-202ENST00000595242 OR5H1A6NKK0 313 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 OR4C45A6NMZ5 311 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 ZNF879B4DU55 563 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 ZNF254O75437 659 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 ZFPL1O95159 310 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 YES1P07947 543 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 RAB3BP20337 219 aa11.05□□□□□ -0.64
SCAF1-202ENST00000595242 APEX1P27695 318 aaKnown RBP11.05□□□□□ -0.64
SCAF1-202ENST00000595242 IL2RGP31785 369 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms