RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 OR2M3Q8NG83 312 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 OR2G2Q8NGZ5 317 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 CCDC107Q8WV48 283 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 ZNF75AQ96N20 296 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 MNTQ99583 582 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 VRK1Q99986 396 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 ANKRD10Q9NXR5 420 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 ETV7Q9Y603 341 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 CPAMD8Q8IZJ3 1885 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 A0A1W2PNR3 127 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 H7C417 338 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 TP53I11O14683 189 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 RBBP9O75884 186 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 FOLR3P41439 243 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 TAS2R20P59543 309 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 GLO1Q04760 184 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 LPCAT3Q6P1A2 487 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 ACOT7LQ6ZUV0 252 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 PRSS35Q8N3Z0 413 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 ZNF676Q8N7Q3 588 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 OR51A4Q8NGJ6 313 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 OR10AC1Q8NH08 325 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 ASB10Q8WXI3 467 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 MIB2Q96AX9 1013 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 GHRLQ9UBU3 117 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 MTFP1Q9UDX5 166 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 RPH3AQ9Y2J0 694 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 IGLV3-32A0A0A0MS00 114 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 NSG1A0A0A6YYJ2 146 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 OR5H14A6NHG9 310 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 G3V3Y1 287 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 ETV2O00321 342 aaPredicted RBP15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 STK17BO94768 372 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 PMS2P2O95744 297 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 MELTFP08582 738 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 CD79AP11912 226 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 CDK2P24941 298 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 SFTPDP35247 375 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 DAP3P51398 398 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 UBE2MP61081 183 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 EXT1Q16394 746 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 LY6G6FQ5SQ64 297 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 DCAF12Q5T6F0 453 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 SLC18B1Q6NT16 456 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 ZNF561Q8N587 486 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 OR4C16Q8NGL9 310 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 OR5B2Q96R09 309 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 GFI1Q99684 422 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 SMCO4Q9NRQ5 59 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 SERINC1Q9NRX5 453 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 TMEM100Q9NV29 134 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 ALKBH4Q9NXW9 302 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 LOXL2Q9Y4K0 774 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 SDK2Q58EX2 2172 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 FREM3P0C091 2139 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 TRBV23-1A0A0A0MS06 115 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 TTLL8A6PVC2 850 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 ACTL6AO96019 429 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 CRABP1P29762 137 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 AKR1C2P52895 323 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 AKR1C1Q04828 323 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 ZP4Q12836 540 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 Q499Y3 187 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 C11orf87Q6NUJ2 197 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 IL34Q6ZMJ4 242 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 MDGA2Q7Z553 956 aa15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 BOLLQ8N9W6 283 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-205ENST00000594973 CNTRLQ7Z7A1 2325 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 IGKV1D-43A0A0B4J1Z2 117 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 OR4C45A6NMZ5 311 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 GLSO94925 669 aaPredicted RBP15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 WNT11O96014 354 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 BIDP55957 195 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 CLDN12P56749 244 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 EIF2B1Q14232 305 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 C4orf46Q504U0 113 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 NKAPLQ5M9Q1 402 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 OR8B4Q96RC9 309 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 POTEKPQ9BYX7 375 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 COMMD4Q9H0A8 199 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 PTGES2Q9H7Z7 377 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 MMP26Q9NRE1 261 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 UQCC1Q9NVA1 299 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 OR5V1Q9UGF6 321 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 V9GY05 133 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 A0A1B0GTI1 187 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 A6NIZ1 184 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 CCL3P10147 92 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 SELLP14151 372 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 OTX2P32243 289 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 RAP1BP61224 184 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 RAP1AP62834 184 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 ZNF124Q15973 351 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 PCGF3Q3KNV8 242 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 SLC25A53Q5H9E4 307 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 WDR38Q5JTN6 314 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 STX12Q86Y82 276 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 GTPBP8Q8N3Z3 284 aaPredicted RBP15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 TCTEX1D2Q8WW35 142 aa15.15■□□□□ 0.02
SHKBP1-205ENST00000594973 PPP1R14AQ96A00 147 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms