RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 OR14K1Q8NGZ2 314 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 OR8S1Q8NH09 359 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 SSC4DQ8WTU2 575 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 GPR137Q96N19 417 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 IP6K3Q96PC2 410 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 ZMAT3Q9HA38 289 aaKnown RBP17.32■□□□□ 0.36
CLIP3-206ENST00000593074 IL17BQ9UHF5 180 aa17.32■□□□□ 0.36
CLIP3-206ENST00000593074 CYB5AP00167 134 aa17.31■□□□□ 0.36
CLIP3-206ENST00000593074 ITGA3P26006 1051 aa17.31■□□□□ 0.36
CLIP3-206ENST00000593074 FOXO1Q12778 655 aa17.31■□□□□ 0.36
CLIP3-206ENST00000593074 WIPI1Q5MNZ9 446 aaPredicted RBP17.31■□□□□ 0.36
CLIP3-206ENST00000593074 LRRC18Q8N456 261 aa17.31■□□□□ 0.36
CLIP3-206ENST00000593074 MEIOBQ8N635 442 aa17.31■□□□□ 0.36
CLIP3-206ENST00000593074 OR2V1Q8NHB1 315 aa17.31■□□□□ 0.36
CLIP3-206ENST00000593074 FREM2Q5SZK8 3169 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 PINLYPA6NC86 204 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 OR5H15A6NDH6 313 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 RAB3DO95716 219 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 FCER2P06734 321 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 DNASE1P24855 282 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 GDF1P27539 372 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 GSK3AP49840 483 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 RSPO1Q2MKA7 263 aaPredicted RBP17.3■□□□□ 0.36
CLIP3-206ENST00000593074 FAM27BQ5VT28 67 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 Q6ZSR3 168 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 OR2W3Q7Z3T1 314 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 ANGPTL5Q86XS5 388 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 SLC39A7Q92504 469 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 NKD1Q969G9 470 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 ZNF837Q96EG3 531 aaPredicted RBP17.3■□□□□ 0.36
CLIP3-206ENST00000593074 PGAM5Q96HS1 289 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 LYZL4Q96KX0 146 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 C1orf147Q96MC9 270 aaPredicted RBP17.3■□□□□ 0.36
CLIP3-206ENST00000593074 PARD6AQ9NPB6 346 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 MGAT4CQ9UBM8 478 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 BOKQ9UMX3 212 aaPredicted RBP17.3■□□□□ 0.36
CLIP3-206ENST00000593074 C5orf63A6NC05 138 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 ITGB2P05107 769 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 NTF4P34130 210 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 GFRA1P56159 465 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 AIMP2Q13155 320 aaKnown RBP17.3■□□□□ 0.36
CLIP3-206ENST00000593074 GFOD2Q3B7J2 385 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 RNF144BQ7Z419 303 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 GALNT16Q8N428 558 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 IL22RA1Q8N6P7 574 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 OR2T35Q8NGX2 323 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 OR10D3Q8NH80 312 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 FBXO17Q96EF6 278 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 CA10Q9NS85 328 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 KNTC1P50748 2209 aa17.3■□□□□ 0.36
CLIP3-206ENST00000593074 DOCK10Q96BY6 2186 aa17.29■□□□□ 0.36
CLIP3-206ENST00000593074 CXCL13O43927 109 aa17.29■□□□□ 0.36
CLIP3-206ENST00000593074 NEURL1O76050 574 aa17.29■□□□□ 0.36
CLIP3-206ENST00000593074 POU3F2P20265 443 aaPredicted RBP17.29■□□□□ 0.36
CLIP3-206ENST00000593074 NAA40Q86UY6 237 aa17.29■□□□□ 0.36
CLIP3-206ENST00000593074 GPR137CQ8N3F9 429 aa17.29■□□□□ 0.36
CLIP3-206ENST00000593074 SPACA5Q96QH8 159 aa17.29■□□□□ 0.36
CLIP3-206ENST00000593074 FAM173AQ9BQD7 235 aa17.29■□□□□ 0.36
CLIP3-206ENST00000593074 MRPS28Q9Y2Q9 187 aaKnown RBP17.29■□□□□ 0.36
CLIP3-206ENST00000593074 ZNF736B4DX44 427 aaPredicted RBP17.28■□□□□ 0.36
CLIP3-206ENST00000593074 F5H5K5 113 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 RLN1P04808 185 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 GIPP09681 153 aaPredicted RBP17.28■□□□□ 0.36
CLIP3-206ENST00000593074 CLDN15P56746 228 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 HYAL4Q2M3T9 481 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 ZNF767PQ75MW2 155 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 OR52B4Q8NGK2 314 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 CMBLQ96DG6 245 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 ALX4Q9H161 411 aaPredicted RBP17.28■□□□□ 0.36
CLIP3-206ENST00000593074 TMEM165Q9HC07 324 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 PIPOXQ9P0Z9 390 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 V9GYS6 101 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 IGKV1-9A0A0C4DH69 117 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 DHRS3O75911 302 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 OR2A4O95047 310 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 APOC1P02654 83 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 ZNF735P0CB33 412 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 SLC6A9P48067 706 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 STARP49675 285 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 GLIPR1L1Q6UWM5 242 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 FJX1Q86VR8 437 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 ZNF584Q8IVC4 421 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 FAM109AQ8N4B1 249 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 FER1L6-AS2Q96M78 137 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 SIGLEC12Q96PQ1 595 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 OR2A7Q96R45 310 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 SLC25A21Q9BQT8 299 aaPredicted RBP17.28■□□□□ 0.36
CLIP3-206ENST00000593074 TINAGL1Q9GZM7 467 aaPredicted RBP17.28■□□□□ 0.36
CLIP3-206ENST00000593074 PLEK2Q9NYT0 353 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 SLC23A1Q9UHI7 598 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 AHCTF1Q8WYP5 2266 aa17.28■□□□□ 0.36
CLIP3-206ENST00000593074 UBE2QL1A1L167 161 aa17.27■□□□□ 0.36
CLIP3-206ENST00000593074 M0QYG6 137 aa17.27■□□□□ 0.36
CLIP3-206ENST00000593074 M0R135 149 aa17.27■□□□□ 0.36
CLIP3-206ENST00000593074 HCKP08631 526 aa17.27■□□□□ 0.36
CLIP3-206ENST00000593074 THBS4P35443 961 aa17.27■□□□□ 0.36
CLIP3-206ENST00000593074 OR3A4PP47883 348 aa17.27■□□□□ 0.36
CLIP3-206ENST00000593074 ECH1Q13011 328 aa17.27■□□□□ 0.36
CLIP3-206ENST00000593074 CDNFQ49AH0 187 aa17.27■□□□□ 0.36
CLIP3-206ENST00000593074 ZNF101Q8IZC7 436 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms