RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	GMDS	O60547	372 aa		15.03	■□□□□ -0
CIRBP-238	ENST00000592412	TSPAN9	O75954	239 aa		15.03	■□□□□ -0
CIRBP-238	ENST00000592412	PSKH1	P11801	424 aa		15.03	■□□□□ -0
CIRBP-238	ENST00000592412	HIST1H1C	P16403	213 aa	Known RBP	15.03	■□□□□ -0
CIRBP-238	ENST00000592412	BEAN1	Q3B7T3	259 aa		15.03	■□□□□ -0
CIRBP-238	ENST00000592412	CDON	Q4KMG0	1287 aa		15.03	■□□□□ -0
CIRBP-238	ENST00000592412	TEX36	Q5VZQ5	186 aa		15.03	■□□□□ -0
CIRBP-238	ENST00000592412	C8orf82	Q6P1X6	216 aa	Predicted RBP	15.03	■□□□□ -0
CIRBP-238	ENST00000592412	LY6G5B	Q8NDX9	201 aa		15.03	■□□□□ -0
CIRBP-238	ENST00000592412	ZNF799	Q96GE5	643 aa		15.03	■□□□□ -0
CIRBP-238	ENST00000592412	C7orf34	Q96L11	122 aa		15.03	■□□□□ -0
CIRBP-238	ENST00000592412	RPRD1B	Q9NQG5	326 aa	Known RBP	15.03	■□□□□ -0
CIRBP-238	ENST00000592412	OR6C68	A6NDL8	312 aa		15.02	■□□□□ -0
CIRBP-238	ENST00000592412	ARPC3	O15145	178 aa		15.02	■□□□□ -0
CIRBP-238	ENST00000592412	DIRAS1	O95057	198 aa		15.02	■□□□□ -0
CIRBP-238	ENST00000592412	NCK1	P16333	377 aa		15.02	■□□□□ -0
CIRBP-238	ENST00000592412	OTX1	P32242	354 aa	Predicted RBP	15.02	■□□□□ -0
CIRBP-238	ENST00000592412	RPS27	P42677	84 aa	Known RBP	15.02	■□□□□ -0
CIRBP-238	ENST00000592412	GSK3B	P49841	420 aa		15.02	■□□□□ -0
CIRBP-238	ENST00000592412	SLC7A2	P52569	658 aa		15.02	■□□□□ -0
CIRBP-238	ENST00000592412	DLX1	P56177	255 aa		15.02	■□□□□ -0
CIRBP-238	ENST00000592412	TPTE	P56180	551 aa		15.02	■□□□□ -0
CIRBP-238	ENST00000592412	C2orf68	Q2NKX9	166 aa		15.02	■□□□□ -0
CIRBP-238	ENST00000592412	RFX4	Q33E94	735 aa		15.02	■□□□□ -0
CIRBP-238	ENST00000592412	FBLN7	Q53RD9	439 aa		15.02	■□□□□ -0
CIRBP-238	ENST00000592412	GLYATL3	Q5SZD4	288 aa		15.02	■□□□□ -0
CIRBP-238	ENST00000592412	WDR86	Q86TI4	376 aa		15.02	■□□□□ -0
CIRBP-238	ENST00000592412	CYP4Z1	Q86W10	505 aa		15.02	■□□□□ -0
CIRBP-238	ENST00000592412	C11orf53	Q8IXP5	236 aa		15.02	■□□□□ -0
CIRBP-238	ENST00000592412	OR4K13	Q8NH42	304 aa		15.02	■□□□□ -0
CIRBP-238	ENST00000592412	ST8SIA4	Q92187	359 aa		15.02	■□□□□ -0
CIRBP-238	ENST00000592412	DHRS1	Q96LJ7	313 aa		15.02	■□□□□ -0
CIRBP-238	ENST00000592412	DPAGT1	Q9H3H5	408 aa		15.02	■□□□□ -0
CIRBP-238	ENST00000592412	CNTD2	Q9H8S5	307 aa		15.02	■□□□□ -0
CIRBP-238	ENST00000592412	TRIM36	Q9NQ86	728 aa		15.02	■□□□□ -0
CIRBP-238	ENST00000592412	MRGBP	Q9NV56	204 aa		15.02	■□□□□ -0
CIRBP-238	ENST00000592412	MRPL15	Q9P015	296 aa	Known RBP	15.02	■□□□□ -0
CIRBP-238	ENST00000592412	VPREB3	Q9UKI3	123 aa		15.02	■□□□□ -0
CIRBP-238	ENST00000592412	KPTN	Q9Y664	436 aa		15.02	■□□□□ -0
CIRBP-238	ENST00000592412	ZNF816-ZNF321P	A0A0X1KG74	233 aa		15.01	□□□□□ -0.01
CIRBP-238	ENST00000592412	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	15.01	□□□□□ -0.01
CIRBP-238	ENST00000592412	ECD	O95905	644 aa	Predicted RBP	15.01	□□□□□ -0.01
CIRBP-238	ENST00000592412	GRP	P07492	148 aa		15.01	□□□□□ -0.01
CIRBP-238	ENST00000592412	EGR3	Q06889	387 aa		15.01	□□□□□ -0.01
CIRBP-238	ENST00000592412	C11orf91	Q3C1V1	193 aa		15.01	□□□□□ -0.01
CIRBP-238	ENST00000592412	DHRS7B	Q6IAN0	325 aa	Predicted RBP	15.01	□□□□□ -0.01
CIRBP-238	ENST00000592412	ARPIN	Q7Z6K5	226 aa		15.01	□□□□□ -0.01
CIRBP-238	ENST00000592412	FAM86B1	Q8N7N1	296 aa		15.01	□□□□□ -0.01
CIRBP-238	ENST00000592412	OR2AJ1	Q8NGZ0	328 aa		15.01	□□□□□ -0.01
CIRBP-238	ENST00000592412	FANK1	Q8TC84	345 aa		15.01	□□□□□ -0.01
CIRBP-238	ENST00000592412	LRTOMT	Q8WZ04	291 aa		15.01	□□□□□ -0.01
CIRBP-238	ENST00000592412	OR52D1	Q9H346	318 aa		15.01	□□□□□ -0.01
CIRBP-238	ENST00000592412	AURKC	Q9UQB9	309 aa		15.01	□□□□□ -0.01
CIRBP-238	ENST00000592412	AP3M1	Q9Y2T2	418 aa		15.01	□□□□□ -0.01
CIRBP-238	ENST00000592412	NOP16	Q9Y3C1	178 aa	Known RBP	15.01	□□□□□ -0.01
CIRBP-238	ENST00000592412	CAPN7	Q9Y6W3	813 aa		15.01	□□□□□ -0.01
CIRBP-238	ENST00000592412	RYR3	Q15413	4870 aa		15.01	□□□□□ -0.01
CIRBP-238	ENST00000592412		A0A1B0GVI7	797 aa		15	□□□□□ -0.01
CIRBP-238	ENST00000592412	RNASEK-C17orf49	H0YIS7	233 aa		15	□□□□□ -0.01
CIRBP-238	ENST00000592412	GSTA4	O15217	222 aa		15	□□□□□ -0.01
CIRBP-238	ENST00000592412	RHCE	P18577	417 aa		15	□□□□□ -0.01
CIRBP-238	ENST00000592412	PCK2	Q16822	640 aa		15	□□□□□ -0.01
CIRBP-238	ENST00000592412	SLC36A3	Q495N2	470 aa		15	□□□□□ -0.01
CIRBP-238	ENST00000592412	KPRP	Q5T749	579 aa	Predicted RBP	15	□□□□□ -0.01
CIRBP-238	ENST00000592412	METAP1D	Q6UB28	335 aa	Predicted RBP	15	□□□□□ -0.01
CIRBP-238	ENST00000592412		Q8N7P7	452 aa		15	□□□□□ -0.01
CIRBP-238	ENST00000592412	SDR9C7	Q8NEX9	313 aa		15	□□□□□ -0.01
CIRBP-238	ENST00000592412	OR56B2P	Q8NGI1	322 aa		15	□□□□□ -0.01
CIRBP-238	ENST00000592412	OR52J3	Q8NH60	311 aa		15	□□□□□ -0.01
CIRBP-238	ENST00000592412	ZNRF4	Q8WWF5	429 aa		15	□□□□□ -0.01
CIRBP-238	ENST00000592412	SEH1L	Q96EE3	360 aa		15	□□□□□ -0.01
CIRBP-238	ENST00000592412	CCL13	Q99616	98 aa		15	□□□□□ -0.01
CIRBP-238	ENST00000592412	SIRT7	Q9NRC8	400 aa		15	□□□□□ -0.01
CIRBP-238	ENST00000592412	FGFR1OP2	Q9NVK5	253 aa		15	□□□□□ -0.01
CIRBP-238	ENST00000592412	TET2	Q6N021	2002 aa	Predicted RBP	15	□□□□□ -0.01
CIRBP-238	ENST00000592412	GGT3P	A6NGU5	568 aa		14.99	□□□□□ -0.01
CIRBP-238	ENST00000592412	REN	P00797	406 aa		14.99	□□□□□ -0.01
CIRBP-238	ENST00000592412	PRB2	P02812	416 aa	Predicted RBP	14.99	□□□□□ -0.01
CIRBP-238	ENST00000592412	FBP1	P09467	338 aa		14.99	□□□□□ -0.01
CIRBP-238	ENST00000592412	CSF1	P09603	554 aa		14.99	□□□□□ -0.01
CIRBP-238	ENST00000592412	AMY2B	P19961	511 aa		14.99	□□□□□ -0.01
CIRBP-238	ENST00000592412	WDR38	Q5JTN6	314 aa		14.99	□□□□□ -0.01
CIRBP-238	ENST00000592412	SAMD5	Q5TGI4	173 aa		14.99	□□□□□ -0.01
CIRBP-238	ENST00000592412	LYPD4	Q6UWN0	246 aa		14.99	□□□□□ -0.01
CIRBP-238	ENST00000592412		Q6ZPA2	131 aa		14.99	□□□□□ -0.01
CIRBP-238	ENST00000592412	FAM216B	Q8N7L0	139 aa		14.99	□□□□□ -0.01
CIRBP-238	ENST00000592412	TNFRSF14	Q92956	283 aa		14.99	□□□□□ -0.01
CIRBP-238	ENST00000592412	FAM162A	Q96A26	154 aa		14.99	□□□□□ -0.01
CIRBP-238	ENST00000592412	ONECUT1	Q9UBC0	465 aa		14.99	□□□□□ -0.01
CIRBP-238	ENST00000592412	FAM96B	Q9Y3D0	163 aa		14.99	□□□□□ -0.01
CIRBP-238	ENST00000592412	hCG_1807616	A0A1W2PRN6	198 aa		14.98	□□□□□ -0.01
CIRBP-238	ENST00000592412		A6NLC8	198 aa		14.98	□□□□□ -0.01
CIRBP-238	ENST00000592412	BHLHE40	O14503	412 aa		14.98	□□□□□ -0.01
CIRBP-238	ENST00000592412	HLA-DQA2	P01906	255 aa		14.98	□□□□□ -0.01
CIRBP-238	ENST00000592412	TROVE2	P10155	538 aa	Known RBP eCLIP	14.98	□□□□□ -0.01
CIRBP-238	ENST00000592412	SLC6A6	P31641	620 aa		14.98	□□□□□ -0.01
CIRBP-238	ENST00000592412	KLRD1	Q13241	179 aa		14.98	□□□□□ -0.01
CIRBP-238	ENST00000592412	SLC35E4	Q6ICL7	350 aa		14.98	□□□□□ -0.01
CIRBP-238	ENST00000592412	LNX2	Q8N448	690 aa		14.98	□□□□□ -0.01
CIRBP-238	ENST00000592412	PNKD	Q8N490	385 aa		14.98	□□□□□ -0.01

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