RNA–Protein interactions for RNA: ENST00000592076.5

TMC6-222, Transcript of transmembrane channel like 6, human

TSL 3

Gene TMC6, Length 693 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-222	ENST00000592076	ERGIC1	Q969X5	290 aa		13.71	□□□□□ -0.21
TMC6-222	ENST00000592076	FAHD2A	Q96GK7	314 aa		13.71	□□□□□ -0.21
TMC6-222	ENST00000592076	CENPN	Q96H22	339 aa	Predicted RBP	13.71	□□□□□ -0.21
TMC6-222	ENST00000592076	REEP6	Q96HR9	211 aa		13.71	□□□□□ -0.21
TMC6-222	ENST00000592076	BRD7	Q9NPI1	651 aa		13.71	□□□□□ -0.21
TMC6-222	ENST00000592076	MRPL15	Q9P015	296 aa	Known RBP	13.71	□□□□□ -0.21
TMC6-222	ENST00000592076	TMEM178B	H3BS89	294 aa		13.7	□□□□□ -0.22
TMC6-222	ENST00000592076	PLPP2	O43688	288 aa		13.7	□□□□□ -0.22
TMC6-222	ENST00000592076	GMDS	O60547	372 aa		13.7	□□□□□ -0.22
TMC6-222	ENST00000592076	FOXH1	O75593	365 aa		13.7	□□□□□ -0.22
TMC6-222	ENST00000592076	CYB5R3	P00387	301 aa	Predicted RBP	13.7	□□□□□ -0.22
TMC6-222	ENST00000592076	PNP	P00491	289 aa		13.7	□□□□□ -0.22
TMC6-222	ENST00000592076	OPRL1	P41146	370 aa		13.7	□□□□□ -0.22
TMC6-222	ENST00000592076	SNCB	Q16143	134 aa		13.7	□□□□□ -0.22
TMC6-222	ENST00000592076	DCAF12L2	Q5VW00	463 aa		13.7	□□□□□ -0.22
TMC6-222	ENST00000592076	KDM4D	Q6B0I6	523 aa		13.7	□□□□□ -0.22
TMC6-222	ENST00000592076	KCTD18	Q6PI47	426 aa	Predicted RBP	13.7	□□□□□ -0.22
TMC6-222	ENST00000592076	SLC16A9	Q7RTY1	509 aa		13.7	□□□□□ -0.22
TMC6-222	ENST00000592076	FTMT	Q8N4E7	242 aa		13.7	□□□□□ -0.22
TMC6-222	ENST00000592076	SPERT	Q8NA61	448 aa		13.7	□□□□□ -0.22
TMC6-222	ENST00000592076	AMELY	Q99218	206 aa		13.7	□□□□□ -0.22
TMC6-222	ENST00000592076	RGCC	Q9H4X1	137 aa		13.7	□□□□□ -0.22
TMC6-222	ENST00000592076	NIPAL2	Q9H841	368 aa		13.7	□□□□□ -0.22
TMC6-222	ENST00000592076	ORC6	Q9Y5N6	252 aa		13.7	□□□□□ -0.22
TMC6-222	ENST00000592076	TMEM14A	Q9Y6G1	99 aa		13.7	□□□□□ -0.22
TMC6-222	ENST00000592076	SAC3D1	A6NKF1	404 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	PRKY	O43930	277 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	MRPL3	P09001	348 aa	Known RBP	13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	SLC2A5	P22732	501 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	GNAL	P38405	381 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	CD200	P41217	278 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	ZMYND11	Q15326	602 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	ZNF181	Q2M3W8	571 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	ESCO2	Q56NI9	601 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	SLX4IP	Q5VYV7	408 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	ZFP1	Q6P2D0	407 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	LRRN1	Q6UXK5	716 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	LRRC28	Q86X40	367 aa	Predicted RBP	13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	KLB	Q86Z14	1044 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	TCEANC	Q8N8B7	351 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	OR8S1	Q8NH09	359 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	PYDC1	Q8WXC3	89 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	SIGLEC11	Q96RL6	698 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	CNN2	Q99439	309 aa	Known RBP	13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	CIB1	Q99828	191 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	RBM4B	Q9BQ04	359 aa	Known RBP	13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	OSBPL10	Q9BXB5	764 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	MRO	Q9BYG7	248 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	YIPF3	Q9GZM5	350 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	RIBC2	Q9H4K1	309 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	FN3KRP	Q9HA64	309 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	UFSP2	Q9NUQ7	469 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	C14orf119	Q9NWQ9	140 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	OAZ3	Q9UMX2	235 aa		13.69	□□□□□ -0.22
TMC6-222	ENST00000592076	PPIAL4E	A0A075B759	164 aa		13.68	□□□□□ -0.22
TMC6-222	ENST00000592076	C5orf63	A6NC05	138 aa		13.68	□□□□□ -0.22
TMC6-222	ENST00000592076	SLC22A31	A6NKX4	558 aa		13.68	□□□□□ -0.22
TMC6-222	ENST00000592076		A6NLC8	198 aa		13.68	□□□□□ -0.22
TMC6-222	ENST00000592076	ZAR1L	A6NP61	321 aa		13.68	□□□□□ -0.22
TMC6-222	ENST00000592076	PPIAL4D	F5H284	164 aa		13.68	□□□□□ -0.22
TMC6-222	ENST00000592076	PPIAL4F	P0DN26	164 aa		13.68	□□□□□ -0.22
TMC6-222	ENST00000592076	RPS2	P15880	293 aa	Known RBP	13.68	□□□□□ -0.22
TMC6-222	ENST00000592076	GATA3	P23771	443 aa		13.68	□□□□□ -0.22
TMC6-222	ENST00000592076	GATA4	P43694	442 aa		13.68	□□□□□ -0.22
TMC6-222	ENST00000592076	PSMA6	P60900	246 aa	Known RBP	13.68	□□□□□ -0.22
TMC6-222	ENST00000592076	ACTR3	P61158	418 aa		13.68	□□□□□ -0.22
TMC6-222	ENST00000592076	LCN2	P80188	198 aa		13.68	□□□□□ -0.22
TMC6-222	ENST00000592076	HNRNPA0	Q13151	305 aa	Known RBP	13.68	□□□□□ -0.22
TMC6-222	ENST00000592076	KPNB1	Q14974	876 aa	Known RBP	13.68	□□□□□ -0.22
TMC6-222	ENST00000592076	PRAMEF6	Q5VXH4	476 aa		13.68	□□□□□ -0.22
TMC6-222	ENST00000592076	NXNL2	Q5VZ03	156 aa		13.68	□□□□□ -0.22
TMC6-222	ENST00000592076	GID4	Q8IVV7	300 aa		13.68	□□□□□ -0.22
TMC6-222	ENST00000592076	TMEM163	Q8TC26	289 aa		13.68	□□□□□ -0.22
TMC6-222	ENST00000592076	SPSB4	Q96A44	273 aa		13.68	□□□□□ -0.22
TMC6-222	ENST00000592076	TEAD3	Q99594	435 aa		13.68	□□□□□ -0.22
TMC6-222	ENST00000592076	PATZ1	Q9HBE1	687 aa	Known RBP	13.68	□□□□□ -0.22
TMC6-222	ENST00000592076	METRN	Q9UJH8	293 aa		13.68	□□□□□ -0.22
TMC6-222	ENST00000592076	IKZF2	Q9UKS7	526 aa		13.68	□□□□□ -0.22
TMC6-222	ENST00000592076	PPIAL4A	Q9Y536	164 aa		13.68	□□□□□ -0.22
TMC6-222	ENST00000592076		A0A1B0GWJ7	208 aa		13.67	□□□□□ -0.22
TMC6-222	ENST00000592076	RNF212B	A8MTL3	300 aa		13.67	□□□□□ -0.22
TMC6-222	ENST00000592076		J3QLI3	93 aa		13.67	□□□□□ -0.22
TMC6-222	ENST00000592076		M0R129	80 aa		13.67	□□□□□ -0.22
TMC6-222	ENST00000592076	ALOX5AP	P20292	161 aa		13.67	□□□□□ -0.22
TMC6-222	ENST00000592076	THBS2	P35442	1172 aa		13.67	□□□□□ -0.22
TMC6-222	ENST00000592076	FAM3A	P98173	230 aa		13.67	□□□□□ -0.22
TMC6-222	ENST00000592076	MAB21L1	Q13394	359 aa		13.67	□□□□□ -0.22
TMC6-222	ENST00000592076	C12orf73	Q69YU5	71 aa		13.67	□□□□□ -0.22
TMC6-222	ENST00000592076	MEPCE	Q7L2J0	689 aa	Known RBP	13.67	□□□□□ -0.22
TMC6-222	ENST00000592076	NLRC3	Q7RTR2	1065 aa		13.67	□□□□□ -0.22
TMC6-222	ENST00000592076	CSNK2A3	Q8NEV1	391 aa		13.67	□□□□□ -0.22
TMC6-222	ENST00000592076	ASB17	Q8WXJ9	295 aa		13.67	□□□□□ -0.22
TMC6-222	ENST00000592076	TMEM158	Q8WZ71	300 aa		13.67	□□□□□ -0.22
TMC6-222	ENST00000592076	DVL3	Q92997	716 aa	Predicted RBP	13.67	□□□□□ -0.22
TMC6-222	ENST00000592076	SGK3	Q96BR1	496 aa		13.67	□□□□□ -0.22
TMC6-222	ENST00000592076	RAB3IP	Q96QF0	476 aa	Predicted RBP	13.67	□□□□□ -0.22
TMC6-222	ENST00000592076	IL4I1	Q96RQ9	567 aa		13.67	□□□□□ -0.22
TMC6-222	ENST00000592076	PAPOLG	Q9BWT3	736 aa	Known RBP	13.67	□□□□□ -0.22
TMC6-222	ENST00000592076	METTL17	Q9H7H0	456 aa	Predicted RBP	13.67	□□□□□ -0.22
TMC6-222	ENST00000592076	OR5V1	Q9UGF6	321 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms