RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 SMCO3A2RU48 225 aa15.33■□□□□ 0.05
SMARCA4-215ENST00000590574 NUDT19A8MXV4 375 aa15.33■□□□□ 0.05
SMARCA4-215ENST00000590574 TAAR5O14804 337 aa15.33■□□□□ 0.05
SMARCA4-215ENST00000590574 ZNF44P15621 663 aa15.33■□□□□ 0.05
SMARCA4-215ENST00000590574 SLC37A1P57057 533 aa15.33■□□□□ 0.05
SMARCA4-215ENST00000590574 FLI1Q01543 452 aaPredicted RBP15.33■□□□□ 0.05
SMARCA4-215ENST00000590574 ZNF611Q8N823 705 aa15.33■□□□□ 0.05
SMARCA4-215ENST00000590574 SLC38A9Q8NBW4 561 aa15.33■□□□□ 0.05
SMARCA4-215ENST00000590574 C2CD4CQ8TF44 421 aa15.33■□□□□ 0.05
SMARCA4-215ENST00000590574 EMG1Q92979 244 aaKnown RBP15.33■□□□□ 0.05
SMARCA4-215ENST00000590574 C2orf50Q96LR7 162 aa15.33■□□□□ 0.05
SMARCA4-215ENST00000590574 SMCO4Q9NRQ5 59 aa15.33■□□□□ 0.05
SMARCA4-215ENST00000590574 MCTS1Q9ULC4 181 aaKnown RBP15.33■□□□□ 0.05
SMARCA4-215ENST00000590574 KLF4O43474 513 aa15.33■□□□□ 0.04
SMARCA4-215ENST00000590574 FOXS1O43638 330 aa15.33■□□□□ 0.04
SMARCA4-215ENST00000590574 ZIC2O95409 532 aaPredicted RBP15.33■□□□□ 0.04
SMARCA4-215ENST00000590574 FHL5Q5TD97 284 aa15.33■□□□□ 0.04
SMARCA4-215ENST00000590574 SLC22A25Q6T423 547 aa15.33■□□□□ 0.04
SMARCA4-215ENST00000590574 ZSCAN4Q8NAM6 433 aaPredicted RBP15.33■□□□□ 0.04
SMARCA4-215ENST00000590574 OR11G2Q8NGC1 345 aa15.33■□□□□ 0.04
SMARCA4-215ENST00000590574 OR4D10Q8NGI6 311 aa15.33■□□□□ 0.04
SMARCA4-215ENST00000590574 PTPMT1Q8WUK0 201 aaPredicted RBP15.33■□□□□ 0.04
SMARCA4-215ENST00000590574 TCRBV16S1A1N1A0A5B0 115 aa15.33■□□□□ 0.04
SMARCA4-215ENST00000590574 NXPH3O95157 252 aa15.33■□□□□ 0.04
SMARCA4-215ENST00000590574 CD1AP06126 327 aa15.33■□□□□ 0.04
SMARCA4-215ENST00000590574 RPA2P15927 270 aa15.33■□□□□ 0.04
SMARCA4-215ENST00000590574 FCGR2CP31995 323 aa15.33■□□□□ 0.04
SMARCA4-215ENST00000590574 LSRQ86X29 649 aaPredicted RBP15.33■□□□□ 0.04
SMARCA4-215ENST00000590574 TCEAL3Q969E4 200 aa15.33■□□□□ 0.04
SMARCA4-215ENST00000590574 GABRA1P14867 456 aa15.33■□□□□ 0.04
SMARCA4-215ENST00000590574 CD80P33681 288 aa15.33■□□□□ 0.04
SMARCA4-215ENST00000590574 OPRM1P35372 400 aa15.33■□□□□ 0.04
SMARCA4-215ENST00000590574 C20orf24Q9BUV8 137 aa15.33■□□□□ 0.04
SMARCA4-215ENST00000590574 NELFAQ9H3P2 528 aa15.33■□□□□ 0.04
SMARCA4-215ENST00000590574 ZNF275Q9NSD4 429 aaPredicted RBP15.33■□□□□ 0.04
SMARCA4-215ENST00000590574 NME2P1O60361 137 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 EFEMP2O95967 443 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 FKBP2P26885 142 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 RPL12P30050 165 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 Q5BKY6 102 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 SYT13Q7L8C5 426 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 SLC38A6Q8IZM9 456 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 LGI3Q8N145 548 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 OR11H4Q8NGC9 324 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 PSMF1Q92530 271 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 KISS1RQ969F8 398 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 C14orf79Q96F83 325 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 ZNF845Q96IR2 970 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 RPS10-NUDT3A0A1W2PQS6 291 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 MSTNO14793 375 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 RAC2P15153 192 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 RPS10P46783 165 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 PLXDC2Q6UX71 529 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 ZNF813Q6ZN06 617 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 OR5T1Q8NG75 326 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 NANOS1Q8WY41 292 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 OR5B12Q96R08 314 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 FOXQ1Q9C009 403 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 UBE2NP61088 152 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 RBM39Q14498 530 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 FAM199XQ6PEV8 388 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 UQCC2Q9BRT2 126 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 NOSIPQ9Y314 301 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 ZNF646O15015 1829 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 GLULP15104 373 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 RBP2P50120 134 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 ARHGEF39Q8N4T4 335 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 IL22RA1Q8N6P7 574 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 TMEM217Q8N7C4 229 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 HGDQ93099 445 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 CPNE4Q96A23 557 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 PLXNA3P51805 1871 aa15.32■□□□□ 0.04
SMARCA4-215ENST00000590574 FAM221AA4D161 298 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 IGF2P01344 180 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 SEZ6L2Q6UXD5 910 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 CLRN3Q8NCR9 226 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 HAS2Q92819 552 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 TRAF4Q9BUZ4 470 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 ZFP64Q9NPA5 681 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 FAHP16930 419 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 TAF9Q16594 264 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 Q6ZRG5 221 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 CATSPERDQ86XM0 798 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 MENTQ9BUN1 341 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 CHST6Q9GZX3 395 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 JTBO76095 146 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 BGLAPP02818 100 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 SMIM10L1P0DMW3 83 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 CXCL2P19875 107 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 PNLIPRP3Q17RR3 467 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 KMT5CQ86Y97 462 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 OR5M8Q8NGP6 311 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 SMIM10Q96HG1 83 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 BCO1Q9HAY6 547 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 PCDHB10Q9UN67 800 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 RER1O15258 196 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 S100A12P80511 92 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 EXT1Q16394 746 aa15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 YRDCQ86U90 279 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-215ENST00000590574 CLEC1AQ8NC01 280 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms