RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 HSPE1-MOB4S4R3N1 261 aa18.12■□□□□ 0.49
ATG4D-212ENST00000590096 DAPL1A0PJW8 107 aa18.11■□□□□ 0.49
ATG4D-212ENST00000590096 RNF223E7ERA6 249 aa18.11■□□□□ 0.49
ATG4D-212ENST00000590096 LYNX1G3V0Z9 82 aa18.11■□□□□ 0.49
ATG4D-212ENST00000590096 MAGEB4O15481 346 aaPredicted RBP18.11■□□□□ 0.49
ATG4D-212ENST00000590096 CD55P08174 381 aa18.11■□□□□ 0.49
ATG4D-212ENST00000590096 LYNX1P0DP58 116 aa18.11■□□□□ 0.49
ATG4D-212ENST00000590096 ACHEP22303 614 aa18.11■□□□□ 0.49
ATG4D-212ENST00000590096 PLEKHG7Q6ZR37 379 aa18.11■□□□□ 0.49
ATG4D-212ENST00000590096 FAM220AQ7Z4H9 259 aa18.11■□□□□ 0.49
ATG4D-212ENST00000590096 C8orf59Q8N0T1 100 aaPredicted RBP18.11■□□□□ 0.49
ATG4D-212ENST00000590096 ZNF540Q8NDQ6 660 aa18.11■□□□□ 0.49
ATG4D-212ENST00000590096 OR8B12Q8NGG6 310 aa18.11■□□□□ 0.49
ATG4D-212ENST00000590096 CNIH3Q8TBE1 160 aa18.11■□□□□ 0.49
ATG4D-212ENST00000590096 LGALS12Q96DT0 336 aa18.11■□□□□ 0.49
ATG4D-212ENST00000590096 C18orf12Q96KH6 178 aa18.11■□□□□ 0.49
ATG4D-212ENST00000590096 SLC30A2Q9BRI3 323 aa18.11■□□□□ 0.49
ATG4D-212ENST00000590096 REG4Q9BYZ8 158 aa18.11■□□□□ 0.49
ATG4D-212ENST00000590096 FAM206AQ9NX38 181 aa18.11■□□□□ 0.49
ATG4D-212ENST00000590096 ZNF319Q9P2F9 582 aa18.11■□□□□ 0.49
ATG4D-212ENST00000590096 ZNF391Q9UJN7 358 aa18.11■□□□□ 0.49
ATG4D-212ENST00000590096 GTF2A1LQ9UNN4 478 aa18.11■□□□□ 0.49
ATG4D-212ENST00000590096 IGHV1-69-2A0A0G2JMI3 117 aa18.1■□□□□ 0.49
ATG4D-212ENST00000590096 METTL15A6NJ78 407 aa18.1■□□□□ 0.49
ATG4D-212ENST00000590096 LOC110117498-PIK3R3F6TDL0 507 aa18.1■□□□□ 0.49
ATG4D-212ENST00000590096 H0YJX3 145 aa18.1■□□□□ 0.49
ATG4D-212ENST00000590096 SMAD7O15105 426 aaKnown RBP18.1■□□□□ 0.49
ATG4D-212ENST00000590096 CDC14BO60729 498 aa18.1■□□□□ 0.49
ATG4D-212ENST00000590096 LILRA1O75019 489 aa18.1■□□□□ 0.49
ATG4D-212ENST00000590096 WBP4O75554 376 aaKnown RBP18.1■□□□□ 0.49
ATG4D-212ENST00000590096 SULT1C4O75897 302 aa18.1■□□□□ 0.49
ATG4D-212ENST00000590096 ATP6V1G2O95670 118 aa18.1■□□□□ 0.49
ATG4D-212ENST00000590096 FADS2O95864 444 aaKnown RBP18.1■□□□□ 0.49
ATG4D-212ENST00000590096 COL8A2P25067 703 aa18.1■□□□□ 0.49
ATG4D-212ENST00000590096 DDOSTP39656 456 aa18.1■□□□□ 0.49
ATG4D-212ENST00000590096 MMP16P51512 607 aa18.1■□□□□ 0.49
ATG4D-212ENST00000590096 RIPPLY3P57055 190 aa18.1■□□□□ 0.49
ATG4D-212ENST00000590096 ZNF85Q03923 595 aa18.1■□□□□ 0.49
ATG4D-212ENST00000590096 RAB40BQ12829 278 aa18.1■□□□□ 0.49
ATG4D-212ENST00000590096 KLHL22Q53GT1 634 aa18.1■□□□□ 0.49
ATG4D-212ENST00000590096 ACBD7Q8N6N7 88 aa18.1■□□□□ 0.49
ATG4D-212ENST00000590096 OR10AD1Q8NGE0 317 aa18.1■□□□□ 0.49
ATG4D-212ENST00000590096 OR56B2PQ8NGI1 322 aa18.1■□□□□ 0.49
ATG4D-212ENST00000590096 MRPL48Q96GC5 212 aaKnown RBP18.1■□□□□ 0.49
ATG4D-212ENST00000590096 MYCBPQ99417 103 aaPredicted RBP18.1■□□□□ 0.49
ATG4D-212ENST00000590096 PBOV1Q9GZY1 135 aa18.1■□□□□ 0.49
ATG4D-212ENST00000590096 SLC22A4Q9H015 551 aa18.1■□□□□ 0.49
ATG4D-212ENST00000590096 MOB1AQ9H8S9 216 aa18.1■□□□□ 0.49
ATG4D-212ENST00000590096 CHODLQ9H9P2 273 aa18.1■□□□□ 0.49
ATG4D-212ENST00000590096 DLL4Q9NR61 685 aa18.1■□□□□ 0.49
ATG4D-212ENST00000590096 NOP16Q9Y3C1 178 aaKnown RBP18.1■□□□□ 0.49
ATG4D-212ENST00000590096 R4GMQ9 66 aa18.1■□□□□ 0.49
ATG4D-212ENST00000590096 ZNF469Q96JG9 3925 aaPredicted RBP18.09■□□□□ 0.49
ATG4D-212ENST00000590096 hCG_38984A0A1B0GV85 526 aa18.09■□□□□ 0.49
ATG4D-212ENST00000590096 J3QRE1 110 aa18.09■□□□□ 0.49
ATG4D-212ENST00000590096 RPP14O95059 124 aaKnown RBP18.09■□□□□ 0.49
ATG4D-212ENST00000590096 FOSL1P15407 271 aa18.09■□□□□ 0.49
ATG4D-212ENST00000590096 TNFRSF1AP19438 455 aa18.09■□□□□ 0.49
ATG4D-212ENST00000590096 CRYBB2P43320 205 aa18.09■□□□□ 0.49
ATG4D-212ENST00000590096 AQP4P55087 323 aa18.09■□□□□ 0.49
ATG4D-212ENST00000590096 ISL1P61371 349 aa18.09■□□□□ 0.49
ATG4D-212ENST00000590096 FAM3AP98173 230 aa18.09■□□□□ 0.49
ATG4D-212ENST00000590096 CIARTQ8N365 385 aaPredicted RBP18.09■□□□□ 0.49
ATG4D-212ENST00000590096 COX4I2Q96KJ9 171 aa18.09■□□□□ 0.49
ATG4D-212ENST00000590096 MRPL15Q9P015 296 aaKnown RBP18.09■□□□□ 0.49
ATG4D-212ENST00000590096 IL19Q9UHD0 177 aa18.09■□□□□ 0.49
ATG4D-212ENST00000590096 NUFIP1Q9UHK0 495 aaKnown RBP18.09■□□□□ 0.49
ATG4D-212ENST00000590096 GNG8Q9UK08 70 aa18.09■□□□□ 0.49
ATG4D-212ENST00000590096 A0A0U1RQV5 110 aa18.08■□□□□ 0.48
ATG4D-212ENST00000590096 ANKRD30BLA7E2S9 258 aa18.08■□□□□ 0.48
ATG4D-212ENST00000590096 GNAO1P09471 354 aa18.08■□□□□ 0.48
ATG4D-212ENST00000590096 GIFP27352 417 aa18.08■□□□□ 0.48
ATG4D-212ENST00000590096 GSK3AP49840 483 aa18.08■□□□□ 0.48
ATG4D-212ENST00000590096 MFGE8Q08431 387 aaPredicted RBP18.08■□□□□ 0.48
ATG4D-212ENST00000590096 SNCBQ16143 134 aa18.08■□□□□ 0.48
ATG4D-212ENST00000590096 SMN1Q16637 294 aaKnown RBP18.08■□□□□ 0.48
ATG4D-212ENST00000590096 HFEQ30201 348 aa18.08■□□□□ 0.48
ATG4D-212ENST00000590096 ZNF684Q5T5D7 378 aa18.08■□□□□ 0.48
ATG4D-212ENST00000590096 BCL2L15Q5TBC7 163 aa18.08■□□□□ 0.48
ATG4D-212ENST00000590096 LIPNQ5VXI9 398 aa18.08■□□□□ 0.48
ATG4D-212ENST00000590096 COMMD2Q86X83 199 aa18.08■□□□□ 0.48
ATG4D-212ENST00000590096 TFAP2CQ92754 450 aa18.08■□□□□ 0.48
ATG4D-212ENST00000590096 YIPF5Q969M3 257 aa18.08■□□□□ 0.48
ATG4D-212ENST00000590096 OR2V2Q96R30 315 aa18.08■□□□□ 0.48
ATG4D-212ENST00000590096 SIGLEC11Q96RL6 698 aa18.08■□□□□ 0.48
ATG4D-212ENST00000590096 RRP15Q9Y3B9 282 aaKnown RBP18.08■□□□□ 0.48
ATG4D-212ENST00000590096 SNX5Q9Y5X3 404 aa18.08■□□□□ 0.48
ATG4D-212ENST00000590096 H0YL77 283 aa18.07■□□□□ 0.48
ATG4D-212ENST00000590096 MLNRO43193 412 aa18.07■□□□□ 0.48
ATG4D-212ENST00000590096 SRSF10O75494 262 aaKnown RBP18.07■□□□□ 0.48
ATG4D-212ENST00000590096 INHBBP09529 407 aa18.07■□□□□ 0.48
ATG4D-212ENST00000590096 TACSTD2P09758 323 aa18.07■□□□□ 0.48
ATG4D-212ENST00000590096 CA6P23280 308 aa18.07■□□□□ 0.48
ATG4D-212ENST00000590096 NR4A2P43354 598 aa18.07■□□□□ 0.48
ATG4D-212ENST00000590096 SRP9P49458 86 aaKnown RBP18.07■□□□□ 0.48
ATG4D-212ENST00000590096 ACTA2P62736 377 aa18.07■□□□□ 0.48
ATG4D-212ENST00000590096 ACTG2P63267 376 aa18.07■□□□□ 0.48
ATG4D-212ENST00000590096 OR8G1Q15617 311 aa18.07■□□□□ 0.48
ATG4D-212ENST00000590096 TP53I3Q53FA7 332 aa18.07■□□□□ 0.48
ATG4D-212ENST00000590096 KCTD20Q7Z5Y7 419 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms