RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 DUX4Q9UBX2 424 aa11.47□□□□□ -0.57
SF3A2-205ENST00000590034 IGHV3OR15-7A0A075B7D8 119 aa11.46□□□□□ -0.57
SF3A2-205ENST00000590034 TRAV38-1A0A0B4J264 116 aa11.46□□□□□ -0.57
SF3A2-205ENST00000590034 DVL1O14640 695 aa11.46□□□□□ -0.57
SF3A2-205ENST00000590034 SLC22A2O15244 555 aa11.46□□□□□ -0.57
SF3A2-205ENST00000590034 GMDSO60547 372 aa11.46□□□□□ -0.57
SF3A2-205ENST00000590034 SASH3O75995 380 aa11.46□□□□□ -0.57
SF3A2-205ENST00000590034 RENP00797 406 aa11.46□□□□□ -0.57
SF3A2-205ENST00000590034 LHBP01229 141 aa11.46□□□□□ -0.57
SF3A2-205ENST00000590034 COX4I1P13073 169 aa11.46□□□□□ -0.57
SF3A2-205ENST00000590034 OTX1P32242 354 aaPredicted RBP11.46□□□□□ -0.57
SF3A2-205ENST00000590034 TPTEP56180 551 aa11.46□□□□□ -0.57
SF3A2-205ENST00000590034 PRB3Q04118 309 aaPredicted RBP11.46□□□□□ -0.57
SF3A2-205ENST00000590034 GLYATL3Q5SZD4 288 aa11.46□□□□□ -0.57
SF3A2-205ENST00000590034 LYPD4Q6UWN0 246 aa11.46□□□□□ -0.57
SF3A2-205ENST00000590034 HDXQ7Z353 690 aa11.46□□□□□ -0.57
SF3A2-205ENST00000590034 PLPP7Q8NBV4 271 aa11.46□□□□□ -0.57
SF3A2-205ENST00000590034 SCCPDHQ8NBX0 429 aa11.46□□□□□ -0.57
SF3A2-205ENST00000590034 OR2AJ1Q8NGZ0 328 aa11.46□□□□□ -0.57
SF3A2-205ENST00000590034 ZNRF4Q8WWF5 429 aa11.46□□□□□ -0.57
SF3A2-205ENST00000590034 SLC22A4Q9H015 551 aa11.46□□□□□ -0.57
SF3A2-205ENST00000590034 TCF7L1Q9HCS4 588 aa11.46□□□□□ -0.57
SF3A2-205ENST00000590034 RPUSD1Q9UJJ7 312 aaKnown RBP11.46□□□□□ -0.57
SF3A2-205ENST00000590034 TET2Q6N021 2002 aaPredicted RBP11.46□□□□□ -0.57
SF3A2-205ENST00000590034 HLA-DQA2P01906 255 aa11.45□□□□□ -0.58
SF3A2-205ENST00000590034 GRPP07492 148 aa11.45□□□□□ -0.58
SF3A2-205ENST00000590034 SLC6A6P31641 620 aa11.45□□□□□ -0.58
SF3A2-205ENST00000590034 DLX1P56177 255 aa11.45□□□□□ -0.58
SF3A2-205ENST00000590034 SLC36A3Q495N2 470 aa11.45□□□□□ -0.58
SF3A2-205ENST00000590034 TEX36Q5VZQ5 186 aa11.45□□□□□ -0.58
SF3A2-205ENST00000590034 VMO1Q7Z5L0 202 aa11.45□□□□□ -0.58
SF3A2-205ENST00000590034 WDR86Q86TI4 376 aa11.45□□□□□ -0.58
SF3A2-205ENST00000590034 OR56B2PQ8NGI1 322 aa11.45□□□□□ -0.58
SF3A2-205ENST00000590034 ST8SIA4Q92187 359 aa11.45□□□□□ -0.58
SF3A2-205ENST00000590034 HOPXQ9BPY8 73 aaPredicted RBP11.45□□□□□ -0.58
SF3A2-205ENST00000590034 KCTD14Q9BQ13 255 aaPredicted RBP11.45□□□□□ -0.58
SF3A2-205ENST00000590034 IFT27Q9BW83 186 aa11.45□□□□□ -0.58
SF3A2-205ENST00000590034 VIPAS39Q9H9C1 493 aa11.45□□□□□ -0.58
SF3A2-205ENST00000590034 MRPL15Q9P015 296 aaKnown RBP11.45□□□□□ -0.58
SF3A2-205ENST00000590034 ABCD2Q9UBJ2 740 aa11.45□□□□□ -0.58
SF3A2-205ENST00000590034 KAAG1Q9UBP8 84 aa11.45□□□□□ -0.58
SF3A2-205ENST00000590034 FAM32AQ9Y421 112 aaKnown RBP11.45□□□□□ -0.58
SF3A2-205ENST00000590034 PLXNB1O43157 2135 aa11.44□□□□□ -0.58
SF3A2-205ENST00000590034 hCG_1807616A0A1W2PRN6 198 aa11.44□□□□□ -0.58
SF3A2-205ENST00000590034 GGT3PA6NGU5 568 aa11.44□□□□□ -0.58
SF3A2-205ENST00000590034 TVP23AA6NH52 213 aa11.44□□□□□ -0.58
SF3A2-205ENST00000590034 A6NLC8 198 aa11.44□□□□□ -0.58
SF3A2-205ENST00000590034 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.44□□□□□ -0.58
SF3A2-205ENST00000590034 NDUFA2O43678 99 aa11.44□□□□□ -0.58
SF3A2-205ENST00000590034 SEMG1P04279 462 aa11.44□□□□□ -0.58
SF3A2-205ENST00000590034 SLC2A1P11166 492 aa11.44□□□□□ -0.58
SF3A2-205ENST00000590034 PYCR1P32322 319 aa11.44□□□□□ -0.58
SF3A2-205ENST00000590034 CDONQ4KMG0 1287 aa11.44□□□□□ -0.58
SF3A2-205ENST00000590034 SLC35F1Q5T1Q4 408 aa11.44□□□□□ -0.58
SF3A2-205ENST00000590034 C11orf53Q8IXP5 236 aa11.44□□□□□ -0.58
SF3A2-205ENST00000590034 LNX2Q8N448 690 aa11.44□□□□□ -0.58
SF3A2-205ENST00000590034 FAM110DQ8TAY7 271 aaPredicted RBP11.44□□□□□ -0.58
SF3A2-205ENST00000590034 SPTSSAQ969W0 71 aa11.44□□□□□ -0.58
SF3A2-205ENST00000590034 DDOQ99489 341 aa11.44□□□□□ -0.58
SF3A2-205ENST00000590034 C16orf95Q9H693 158 aa11.44□□□□□ -0.58
SF3A2-205ENST00000590034 KRCC1Q9NPI7 259 aaPredicted RBP11.44□□□□□ -0.58
SF3A2-205ENST00000590034 TRIM36Q9NQ86 728 aa11.44□□□□□ -0.58
SF3A2-205ENST00000590034 DCAF13Q9NV06 445 aaKnown RBP11.44□□□□□ -0.58
SF3A2-205ENST00000590034 ZNRD1Q9P1U0 126 aa11.44□□□□□ -0.58
SF3A2-205ENST00000590034 NOP16Q9Y3C1 178 aaKnown RBP11.44□□□□□ -0.58
SF3A2-205ENST00000590034 KPTNQ9Y664 436 aa11.44□□□□□ -0.58
SF3A2-205ENST00000590034 V9GYQ6 96 aa11.44□□□□□ -0.58
SF3A2-205ENST00000590034 BHLHE40O14503 412 aa11.43□□□□□ -0.58
SF3A2-205ENST00000590034 ECDO95905 644 aaPredicted RBP11.43□□□□□ -0.58
SF3A2-205ENST00000590034 NOS3P29474 1203 aa11.43□□□□□ -0.58
SF3A2-205ENST00000590034 NUDT2P50583 147 aa11.43□□□□□ -0.58
SF3A2-205ENST00000590034 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.43□□□□□ -0.58
SF3A2-205ENST00000590034 PCK2Q16822 640 aa11.43□□□□□ -0.58
SF3A2-205ENST00000590034 WDR38Q5JTN6 314 aa11.43□□□□□ -0.58
SF3A2-205ENST00000590034 HACD2Q6Y1H2 254 aa11.43□□□□□ -0.58
SF3A2-205ENST00000590034 GDPGP1Q6ZNW5 385 aa11.43□□□□□ -0.58
SF3A2-205ENST00000590034 FAM216BQ8N7L0 139 aa11.43□□□□□ -0.58
SF3A2-205ENST00000590034 CYB561A3Q8NBI2 242 aa11.43□□□□□ -0.58
SF3A2-205ENST00000590034 LY6G5BQ8NDX9 201 aa11.43□□□□□ -0.58
SF3A2-205ENST00000590034 SEH1LQ96EE3 360 aa11.43□□□□□ -0.58
SF3A2-205ENST00000590034 CCL13Q99616 98 aa11.43□□□□□ -0.58
SF3A2-205ENST00000590034 CNTD2Q9H8S5 307 aa11.43□□□□□ -0.58
SF3A2-205ENST00000590034 SIRT7Q9NRC8 400 aa11.43□□□□□ -0.58
SF3A2-205ENST00000590034 KCNG2Q9UJ96 466 aa11.43□□□□□ -0.58
SF3A2-205ENST00000590034 VPREB3Q9UKI3 123 aa11.43□□□□□ -0.58
SF3A2-205ENST00000590034 A0A1B0GVI7 797 aa11.42□□□□□ -0.58
SF3A2-205ENST00000590034 RNASEK-C17orf49H0YIS7 233 aa11.42□□□□□ -0.58
SF3A2-205ENST00000590034 TSPAN9O75954 239 aa11.42□□□□□ -0.58
SF3A2-205ENST00000590034 AMY2BP19961 511 aa11.42□□□□□ -0.58
SF3A2-205ENST00000590034 GSSP48637 474 aa11.42□□□□□ -0.58
SF3A2-205ENST00000590034 PRKXP51817 358 aa11.42□□□□□ -0.58
SF3A2-205ENST00000590034 CSNK2BP67870 215 aa11.42□□□□□ -0.58
SF3A2-205ENST00000590034 SPIBQ01892 262 aa11.42□□□□□ -0.58
SF3A2-205ENST00000590034 C11orf91Q3C1V1 193 aa11.42□□□□□ -0.58
SF3A2-205ENST00000590034 HIST2H2BDQ6DRA6 164 aa11.42□□□□□ -0.58
SF3A2-205ENST00000590034 DHRS7BQ6IAN0 325 aaPredicted RBP11.42□□□□□ -0.58
SF3A2-205ENST00000590034 GLYATQ6IB77 296 aa11.42□□□□□ -0.58
SF3A2-205ENST00000590034 METAP1DQ6UB28 335 aaPredicted RBP11.42□□□□□ -0.58
SF3A2-205ENST00000590034 DRAM2Q6UX65 266 aa11.42□□□□□ -0.58
SF3A2-205ENST00000590034 DCXRQ7Z4W1 244 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms