RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 RPL3LQ92901 407 aaKnown RBP18.32■□□□□ 0.52
R3HDM4-204ENST00000589428 DCLRE1CQ96SD1 692 aaKnown RBP18.32■□□□□ 0.52
R3HDM4-204ENST00000589428 CCL19Q99731 98 aa18.32■□□□□ 0.52
R3HDM4-204ENST00000589428 OR51E2Q9H255 320 aa18.32■□□□□ 0.52
R3HDM4-204ENST00000589428 ENPP5Q9UJA9 477 aa18.32■□□□□ 0.52
R3HDM4-204ENST00000589428 LRBAP50851 2863 aa18.32■□□□□ 0.52
R3HDM4-204ENST00000589428 C5orf49A4QMS7 147 aa18.32■□□□□ 0.52
R3HDM4-204ENST00000589428 C5orf63A6NC05 138 aa18.32■□□□□ 0.52
R3HDM4-204ENST00000589428 TMEM212A6NML5 194 aa18.32■□□□□ 0.52
R3HDM4-204ENST00000589428 APOC1P02654 83 aa18.32■□□□□ 0.52
R3HDM4-204ENST00000589428 ANXA2P07355 339 aaKnown RBP18.32■□□□□ 0.52
R3HDM4-204ENST00000589428 ZNF35P13682 527 aa18.32■□□□□ 0.52
R3HDM4-204ENST00000589428 CCNOP22674 350 aa18.32■□□□□ 0.52
R3HDM4-204ENST00000589428 SNTB2Q13425 540 aaKnown RBP18.32■□□□□ 0.52
R3HDM4-204ENST00000589428 ZNF544Q6NX49 715 aa18.32■□□□□ 0.52
R3HDM4-204ENST00000589428 FAM57BQ71RH2 274 aa18.32■□□□□ 0.52
R3HDM4-204ENST00000589428 ANKRD13BQ86YJ7 626 aa18.32■□□□□ 0.52
R3HDM4-204ENST00000589428 OR8B12Q8NGG6 310 aa18.32■□□□□ 0.52
R3HDM4-204ENST00000589428 OR13C5Q8NGS8 318 aa18.32■□□□□ 0.52
R3HDM4-204ENST00000589428 OR5AK2Q8NH90 309 aa18.32■□□□□ 0.52
R3HDM4-204ENST00000589428 NINJ1Q92982 152 aa18.32■□□□□ 0.52
R3HDM4-204ENST00000589428 CA10Q9NS85 328 aa18.32■□□□□ 0.52
R3HDM4-204ENST00000589428 ZNF319Q9P2F9 582 aa18.32■□□□□ 0.52
R3HDM4-204ENST00000589428 N6AMT1Q9Y5N5 214 aa18.32■□□□□ 0.52
R3HDM4-204ENST00000589428 PLCE1Q9P212 2302 aa18.31■□□□□ 0.52
R3HDM4-204ENST00000589428 GPRIN2O60269 458 aa18.31■□□□□ 0.52
R3HDM4-204ENST00000589428 TTRP02766 147 aa18.31■□□□□ 0.52
R3HDM4-204ENST00000589428 NR4A1P22736 598 aa18.31■□□□□ 0.52
R3HDM4-204ENST00000589428 CRYBB2P43320 205 aa18.31■□□□□ 0.52
R3HDM4-204ENST00000589428 FABP6P51161 128 aa18.31■□□□□ 0.52
R3HDM4-204ENST00000589428 RPS11P62280 158 aaKnown RBP eCLIP18.31■□□□□ 0.52
R3HDM4-204ENST00000589428 INSL4Q14641 139 aa18.31■□□□□ 0.52
R3HDM4-204ENST00000589428 VHLLQ6RSH7 139 aa18.31■□□□□ 0.52
R3HDM4-204ENST00000589428 ELMOD2Q8IZ81 293 aa18.31■□□□□ 0.52
R3HDM4-204ENST00000589428 RDH10Q8IZV5 341 aa18.31■□□□□ 0.52
R3HDM4-204ENST00000589428 FBXL14Q8N1E6 418 aa18.31■□□□□ 0.52
R3HDM4-204ENST00000589428 PAQR4Q8N4S7 273 aaPredicted RBP18.31■□□□□ 0.52
R3HDM4-204ENST00000589428 ZNF676Q8N7Q3 588 aa18.31■□□□□ 0.52
R3HDM4-204ENST00000589428 TRMT61AQ96FX7 289 aaKnown RBP18.31■□□□□ 0.52
R3HDM4-204ENST00000589428 STUB1Q9UNE7 303 aa18.31■□□□□ 0.52
R3HDM4-204ENST00000589428 CSMD2Q7Z408 3487 aa18.3■□□□□ 0.52
R3HDM4-204ENST00000589428 GPX5O75715 221 aa18.3■□□□□ 0.52
R3HDM4-204ENST00000589428 GABARAPO95166 117 aa18.3■□□□□ 0.52
R3HDM4-204ENST00000589428 ATE1O95260 518 aa18.3■□□□□ 0.52
R3HDM4-204ENST00000589428 PSMA1P25786 263 aaKnown RBP18.3■□□□□ 0.52
R3HDM4-204ENST00000589428 FABP5Q01469 135 aa18.3■□□□□ 0.52
R3HDM4-204ENST00000589428 CD200R1LQ6Q8B3 271 aa18.3■□□□□ 0.52
R3HDM4-204ENST00000589428 CHCHD6Q9BRQ6 235 aa18.3■□□□□ 0.52
R3HDM4-204ENST00000589428 COMMD4Q9H0A8 199 aa18.3■□□□□ 0.52
R3HDM4-204ENST00000589428 ZNF281Q9Y2X9 895 aa18.3■□□□□ 0.52
R3HDM4-204ENST00000589428 NAV2Q8IVL1 2488 aa18.3■□□□□ 0.52
R3HDM4-204ENST00000589428 ACOD1A6NK06 481 aa18.29■□□□□ 0.52
R3HDM4-204ENST00000589428 RPS23P62266 143 aaKnown RBP18.29■□□□□ 0.52
R3HDM4-204ENST00000589428 CTF1Q16619 201 aa18.29■□□□□ 0.52
R3HDM4-204ENST00000589428 SNAI3Q3KNW1 292 aa18.29■□□□□ 0.52
R3HDM4-204ENST00000589428 OR10AC1Q8NH08 325 aa18.29■□□□□ 0.52
R3HDM4-204ENST00000589428 TMEM171Q8WVE6 324 aa18.29■□□□□ 0.52
R3HDM4-204ENST00000589428 PIGTQ969N2 578 aa18.29■□□□□ 0.52
R3HDM4-204ENST00000589428 ISOC1Q96CN7 298 aa18.29■□□□□ 0.52
R3HDM4-204ENST00000589428 NDUFA13Q9P0J0 144 aa18.29■□□□□ 0.52
R3HDM4-204ENST00000589428 LAMP3Q9UQV4 416 aa18.29■□□□□ 0.52
R3HDM4-204ENST00000589428 CCDC160A6NGH7 325 aa18.29■□□□□ 0.52
R3HDM4-204ENST00000589428 VSTM5A8MXK1 200 aa18.29■□□□□ 0.52
R3HDM4-204ENST00000589428 AIREO43918 545 aa18.29■□□□□ 0.52
R3HDM4-204ENST00000589428 DANCRP0C864 163 aa18.29■□□□□ 0.52
R3HDM4-204ENST00000589428 APOBEC3AP31941 199 aaPredicted RBP18.29■□□□□ 0.52
R3HDM4-204ENST00000589428 TMBIM6P55061 237 aa18.29■□□□□ 0.52
R3HDM4-204ENST00000589428 NKX6-1P78426 367 aaPredicted RBP18.29■□□□□ 0.52
R3HDM4-204ENST00000589428 AGAP6Q5VW22 663 aa18.29■□□□□ 0.52
R3HDM4-204ENST00000589428 MUC15Q8N387 334 aa18.29■□□□□ 0.52
R3HDM4-204ENST00000589428 MS4A15Q8N5U1 240 aa18.29■□□□□ 0.52
R3HDM4-204ENST00000589428 OR51A4Q8NGJ6 313 aa18.29■□□□□ 0.52
R3HDM4-204ENST00000589428 PGAM5Q96HS1 289 aa18.29■□□□□ 0.52
R3HDM4-204ENST00000589428 C1QTNF5Q9BXJ0 243 aa18.29■□□□□ 0.52
R3HDM4-204ENST00000589428 ZNF442Q9H7R0 627 aa18.29■□□□□ 0.52
R3HDM4-204ENST00000589428 LOC100506127A0A0U1RQW1 187 aa18.28■□□□□ 0.52
R3HDM4-204ENST00000589428 LOC107986453A0A1B0GWG9 222 aa18.28■□□□□ 0.52
R3HDM4-204ENST00000589428 RGS9O75916 674 aaPredicted RBP18.28■□□□□ 0.52
R3HDM4-204ENST00000589428 LCATP04180 440 aa18.28■□□□□ 0.52
R3HDM4-204ENST00000589428 HLA-DPB1P04440 258 aa18.28■□□□□ 0.52
R3HDM4-204ENST00000589428 SOD3P08294 240 aa18.28■□□□□ 0.52
R3HDM4-204ENST00000589428 UBCP0CG48 685 aaKnown RBP18.28■□□□□ 0.52
R3HDM4-204ENST00000589428 WNT5AP41221 380 aa18.28■□□□□ 0.52
R3HDM4-204ENST00000589428 TRAM1Q15629 374 aa18.28■□□□□ 0.52
R3HDM4-204ENST00000589428 TIMM50Q3ZCQ8 353 aa18.28■□□□□ 0.52
R3HDM4-204ENST00000589428 YIF1BQ5BJH7 314 aa18.28■□□□□ 0.52
R3HDM4-204ENST00000589428 TMEM91Q6ZNR0 172 aa18.28■□□□□ 0.52
R3HDM4-204ENST00000589428 COLCA1Q6ZS62 124 aa18.28■□□□□ 0.52
R3HDM4-204ENST00000589428 ZNF420Q8TAQ5 688 aaPredicted RBP18.28■□□□□ 0.52
R3HDM4-204ENST00000589428 ABHD4Q8TB40 342 aa18.28■□□□□ 0.52
R3HDM4-204ENST00000589428 RAB2BQ8WUD1 216 aa18.28■□□□□ 0.52
R3HDM4-204ENST00000589428 FAM192AQ9GZU8 254 aa18.28■□□□□ 0.52
R3HDM4-204ENST00000589428 EIF3KQ9UBQ5 218 aaKnown RBP18.28■□□□□ 0.52
R3HDM4-204ENST00000589428 CSMD1Q96PZ7 3565 aa18.28■□□□□ 0.52
R3HDM4-204ENST00000589428 H3BSH0 61 aa18.27■□□□□ 0.52
R3HDM4-204ENST00000589428 P2RY10O00398 339 aa18.27■□□□□ 0.52
R3HDM4-204ENST00000589428 GABRPO00591 440 aa18.27■□□□□ 0.52
R3HDM4-204ENST00000589428 SC5DO75845 299 aa18.27■□□□□ 0.52
R3HDM4-204ENST00000589428 ISG15P05161 165 aa18.27■□□□□ 0.52
R3HDM4-204ENST00000589428 FAM157BP0CG42 384 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms