RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 OR6C65A6NJZ3 312 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 AQP7P3A6NL99 342 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 GJE1A6NN92 205 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 QDPRP09417 244 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 ZNF35P13682 527 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 AMY2BP19961 511 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 MPZP25189 248 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 SFTPDP35247 375 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 CLDN6P56747 220 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 H2BFSP57053 126 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 LSM6P62312 80 aaKnown RBP6.55□□□□□ -1.36
ZNF540-206ENST00000589117 CSNK2A1P68400 391 aaPredicted RBP6.55□□□□□ -1.36
ZNF540-206ENST00000589117 EIF3IQ13347 325 aaKnown RBP6.55□□□□□ -1.36
ZNF540-206ENST00000589117 ARL6IP1Q15041 203 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 ZNF385CQ66K41 422 aaPredicted RBP6.55□□□□□ -1.36
ZNF540-206ENST00000589117 TMEM81Q6P7N7 255 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 TMPPEQ6ZT21 453 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 RFPL4BQ6ZWI9 263 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 TMUB2Q71RG4 321 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 DOK3Q7L591 496 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 ABHD12BQ7Z5M8 362 aaPredicted RBP6.55□□□□□ -1.36
ZNF540-206ENST00000589117 TRAPPC6BQ86SZ2 158 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 BEST3Q8N1M1 668 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 ZDHHC22Q8N966 263 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 ACBD4Q8NC06 268 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 CCDC54Q8NEL0 328 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 OR4D6Q8NGJ1 314 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 SUN5Q8TC36 379 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 GPER1Q99527 375 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 PHB2Q99623 299 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 URM1Q9BTM9 101 aaKnown RBP6.55□□□□□ -1.36
ZNF540-206ENST00000589117 PDCD10Q9BUL8 212 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 LUZP4Q9P127 313 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 GHRLQ9UBU3 117 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 NUP50Q9UKX7 468 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 EML5Q05BV3 1969 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 CACNA1CQ13936 2221 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 CEP192Q8TEP8 1941 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 IGKV1D-43A0A0B4J1Z2 117 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 G3V3Q6 166 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 M0QYG6 137 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 EFNA2O43921 213 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 RPA2P15927 270 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 SDHBP21912 280 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 CD34P28906 385 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 CBX5P45973 191 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 GK2Q14410 553 aaPredicted RBP6.55□□□□□ -1.36
ZNF540-206ENST00000589117 TESK1Q15569 626 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 TMEM95Q3KNT9 176 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 ZNF260Q3ZCT1 412 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 ACTBL2Q562R1 376 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 NHLRC3Q5JS37 347 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 SLC25A47Q6Q0C1 308 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 ZNF546Q86UE3 836 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 FJX1Q86VR8 437 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 GTPBP8Q8N3Z3 284 aaPredicted RBP6.55□□□□□ -1.36
ZNF540-206ENST00000589117 ZNF283Q8N7M2 679 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 FADS6Q8N9I5 356 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 GJC3Q8NFK1 279 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 OR52N4Q8NGI2 321 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 OR56B1Q8NGI3 324 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 OR1J2Q8NGS2 313 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 OR13C9Q8NGT0 318 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 OR10R2Q8NGX6 335 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 POC1BQ8TC44 478 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 M1APQ8TC57 530 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 IFI44Q8TCB0 444 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 OR51E1Q8TCB6 317 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 SCARB1Q8WTV0 552 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 INTS12Q96CB8 462 aaKnown RBP6.55□□□□□ -1.36
ZNF540-206ENST00000589117 NPAS1Q99742 590 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 SLX1AQ9BQ83 275 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 EDEM2Q9BV94 578 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 MFFQ9GZY8 342 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 KCNK15Q9H427 330 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 GAREM1Q9H706 876 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 TMEM185BQ9H7F4 350 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 ZMAT3Q9HA38 289 aaKnown RBP6.55□□□□□ -1.36
ZNF540-206ENST00000589117 MYEF2Q9P2K5 600 aaKnown RBP6.55□□□□□ -1.36
ZNF540-206ENST00000589117 ASH2LQ9UBL3 628 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 PILRBQ9UKJ0 227 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 EDARQ9UNE0 448 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 NOP16Q9Y3C1 178 aaKnown RBP6.55□□□□□ -1.36
ZNF540-206ENST00000589117 B3GALT1Q9Y5Z6 326 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 LOC102723996A0A087X1L8 192 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 RFPL4AA6NLU0 287 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 NPIPA2E9PIF3 369 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 RFPL4AL1F8VTS6 287 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 NPIPA3F8WFD2 350 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 RAB27BO00194 218 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 TRAF3IP2O43734 574 aaPredicted RBP6.54□□□□□ -1.36
ZNF540-206ENST00000589117 MTRF1O75570 445 aaKnown RBP6.54□□□□□ -1.36
ZNF540-206ENST00000589117 B3GALNT1O75752 331 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 HLA-AP01891 365 aaKnown RBP6.54□□□□□ -1.36
ZNF540-206ENST00000589117 CFIP05156 583 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 FCER2P06734 321 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 HCKP08631 526 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 CXCL2P19875 107 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 PTGDSP41222 190 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 SSR4P51571 173 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms