RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 CROCCP2Q86T23 111 aa17.77■□□□□ 0.44
CAPNS1-205ENST00000588780 LINC00346Q8IVM7 164 aa17.77■□□□□ 0.44
CAPNS1-205ENST00000588780 DPP10Q8N608 796 aa17.77■□□□□ 0.44
CAPNS1-205ENST00000588780 Q8N7P7 452 aa17.77■□□□□ 0.44
CAPNS1-205ENST00000588780 CITED2Q99967 270 aaPredicted RBP17.77■□□□□ 0.44
CAPNS1-205ENST00000588780 OCSTAMPQ9BR26 566 aa17.77■□□□□ 0.44
CAPNS1-205ENST00000588780 C14orf119Q9NWQ9 140 aa17.77■□□□□ 0.44
CAPNS1-205ENST00000588780 HIST1H3AP68431 136 aa17.76■□□□□ 0.43
CAPNS1-205ENST00000588780 BLMHQ13867 455 aa17.76■□□□□ 0.43
CAPNS1-205ENST00000588780 TRAM2Q15035 370 aa17.76■□□□□ 0.43
CAPNS1-205ENST00000588780 KCNMB1Q16558 191 aa17.76■□□□□ 0.43
CAPNS1-205ENST00000588780 RSPO1Q2MKA7 263 aaPredicted RBP17.76■□□□□ 0.43
CAPNS1-205ENST00000588780 HIST2H3PS2Q5TEC6 136 aa17.76■□□□□ 0.43
CAPNS1-205ENST00000588780 TEX36Q5VZQ5 186 aa17.76■□□□□ 0.43
CAPNS1-205ENST00000588780 HIST2H3AQ71DI3 136 aa17.76■□□□□ 0.43
CAPNS1-205ENST00000588780 RRM2BQ7LG56 351 aa17.76■□□□□ 0.43
CAPNS1-205ENST00000588780 OR2AJ1Q8NGZ0 328 aa17.76■□□□□ 0.43
CAPNS1-205ENST00000588780 LRRC29Q8WV35 223 aa17.76■□□□□ 0.43
CAPNS1-205ENST00000588780 ATF6BQ99941 703 aa17.76■□□□□ 0.43
CAPNS1-205ENST00000588780 PRPF19Q9UMS4 504 aaKnown RBP17.76■□□□□ 0.43
CAPNS1-205ENST00000588780 A4GNTQ9UNA3 340 aa17.76■□□□□ 0.43
CAPNS1-205ENST00000588780 A0A1W2PQ09 198 aa17.75■□□□□ 0.43
CAPNS1-205ENST00000588780 A0A1W2PRX2 142 aa17.75■□□□□ 0.43
CAPNS1-205ENST00000588780 PTBP3O95758 552 aaKnown RBP17.75■□□□□ 0.43
CAPNS1-205ENST00000588780 ZNF26P17031 533 aaPredicted RBP17.75■□□□□ 0.43
CAPNS1-205ENST00000588780 POU1F1P28069 291 aa17.75■□□□□ 0.43
CAPNS1-205ENST00000588780 SDHAP31040 664 aa17.75■□□□□ 0.43
CAPNS1-205ENST00000588780 GRK5P34947 590 aa17.75■□□□□ 0.43
CAPNS1-205ENST00000588780 TPTEP56180 551 aa17.75■□□□□ 0.43
CAPNS1-205ENST00000588780 TRAP1Q12931 704 aaKnown RBP17.75■□□□□ 0.43
CAPNS1-205ENST00000588780 PCK2Q16822 640 aa17.75■□□□□ 0.43
CAPNS1-205ENST00000588780 ARSJQ5FYB0 599 aaPredicted RBP17.75■□□□□ 0.43
CAPNS1-205ENST00000588780 DNM1P34Q6PK57 102 aa17.75■□□□□ 0.43
CAPNS1-205ENST00000588780 FAM122BQ7Z309 247 aa17.75■□□□□ 0.43
CAPNS1-205ENST00000588780 OR8S1Q8NH09 359 aa17.75■□□□□ 0.43
CAPNS1-205ENST00000588780 C17orf50Q8WW18 174 aa17.75■□□□□ 0.43
CAPNS1-205ENST00000588780 DMRTB1Q96MA1 342 aa17.75■□□□□ 0.43
CAPNS1-205ENST00000588780 DCTN5Q9BTE1 182 aa17.75■□□□□ 0.43
CAPNS1-205ENST00000588780 SF3B6Q9Y3B4 125 aaKnown RBP17.75■□□□□ 0.43
CAPNS1-205ENST00000588780 COL7A1Q02388 2944 aa17.75■□□□□ 0.43
CAPNS1-205ENST00000588780 MUC1P15941 1255 aaPredicted RBP17.74■□□□□ 0.43
CAPNS1-205ENST00000588780 MSX2P35548 267 aaPredicted RBP17.74■□□□□ 0.43
CAPNS1-205ENST00000588780 MDH1P40925 334 aaKnown RBP17.74■□□□□ 0.43
CAPNS1-205ENST00000588780 HABP2Q14520 560 aaPredicted RBP17.74■□□□□ 0.43
CAPNS1-205ENST00000588780 CYBRD1Q53TN4 286 aa17.74■□□□□ 0.43
CAPNS1-205ENST00000588780 GPR139Q6DWJ6 353 aa17.74■□□□□ 0.43
CAPNS1-205ENST00000588780 CFAP77Q6ZQR2 320 aa17.74■□□□□ 0.43
CAPNS1-205ENST00000588780 TNFRSF14Q92956 283 aa17.74■□□□□ 0.43
CAPNS1-205ENST00000588780 TSSK2Q96PF2 358 aa17.74■□□□□ 0.43
CAPNS1-205ENST00000588780 METTL8Q9H825 291 aaKnown RBP17.74■□□□□ 0.43
CAPNS1-205ENST00000588780 VSX1Q9NZR4 365 aaPredicted RBP17.74■□□□□ 0.43
CAPNS1-205ENST00000588780 CAPN7Q9Y6W3 813 aa17.74■□□□□ 0.43
CAPNS1-205ENST00000588780 BHLHE40O14503 412 aa17.73■□□□□ 0.43
CAPNS1-205ENST00000588780 CDC42EP2O14613 210 aa17.73■□□□□ 0.43
CAPNS1-205ENST00000588780 ACOT8O14734 319 aa17.73■□□□□ 0.43
CAPNS1-205ENST00000588780 ANGPTL7O43827 346 aa17.73■□□□□ 0.43
CAPNS1-205ENST00000588780 LHBP01229 141 aa17.73■□□□□ 0.43
CAPNS1-205ENST00000588780 CRABP1P29762 137 aa17.73■□□□□ 0.43
CAPNS1-205ENST00000588780 GSK3BP49841 420 aa17.73■□□□□ 0.43
CAPNS1-205ENST00000588780 GZMMP51124 257 aa17.73■□□□□ 0.43
CAPNS1-205ENST00000588780 GMFBP60983 142 aa17.73■□□□□ 0.43
CAPNS1-205ENST00000588780 TBPL2Q6SJ96 375 aa17.73■□□□□ 0.43
CAPNS1-205ENST00000588780 ADCK1Q86TW2 530 aa17.73■□□□□ 0.43
CAPNS1-205ENST00000588780 OR2AE1Q8NHA4 323 aa17.73■□□□□ 0.43
CAPNS1-205ENST00000588780 OR5M11Q96RB7 305 aa17.73■□□□□ 0.43
CAPNS1-205ENST00000588780 NSRP1Q9H0G5 558 aaKnown RBP17.73■□□□□ 0.43
CAPNS1-205ENST00000588780 SRA1Q9HD15 236 aaKnown RBP17.73■□□□□ 0.43
CAPNS1-205ENST00000588780 MRPL15Q9P015 296 aaKnown RBP17.73■□□□□ 0.43
CAPNS1-205ENST00000588780 N6AMT1Q9Y5N5 214 aa17.73■□□□□ 0.43
CAPNS1-205ENST00000588780 IER3IP1Q9Y5U9 82 aa17.73■□□□□ 0.43
CAPNS1-205ENST00000588780 WI2-2373I1.2A0A1W2PRP0 233 aa17.72■□□□□ 0.43
CAPNS1-205ENST00000588780 NDUFB2O95178 105 aa17.72■□□□□ 0.43
CAPNS1-205ENST00000588780 PF4V1P10720 104 aa17.72■□□□□ 0.43
CAPNS1-205ENST00000588780 PAX6P26367 422 aa17.72■□□□□ 0.43
CAPNS1-205ENST00000588780 BMXP51813 675 aa17.72■□□□□ 0.43
CAPNS1-205ENST00000588780 ZNF92Q03936 586 aa17.72■□□□□ 0.43
CAPNS1-205ENST00000588780 CYLC2Q14093 348 aaPredicted RBP17.72■□□□□ 0.43
CAPNS1-205ENST00000588780 RABL3Q5HYI8 236 aa17.72■□□□□ 0.43
CAPNS1-205ENST00000588780 WDR93Q6P2C0 686 aa17.72■□□□□ 0.43
CAPNS1-205ENST00000588780 PTCHD4Q6ZW05 846 aa17.72■□□□□ 0.43
CAPNS1-205ENST00000588780 TSEN54Q7Z6J9 526 aaKnown RBP17.72■□□□□ 0.43
CAPNS1-205ENST00000588780 RNF113BQ8IZP6 322 aaKnown RBP17.72■□□□□ 0.43
CAPNS1-205ENST00000588780 OR5T2Q8NGG2 359 aa17.72■□□□□ 0.43
CAPNS1-205ENST00000588780 OR9Q1Q8NGQ5 310 aa17.72■□□□□ 0.43
CAPNS1-205ENST00000588780 SPTSSAQ969W0 71 aa17.72■□□□□ 0.43
CAPNS1-205ENST00000588780 C7orf26Q96N11 449 aa17.72■□□□□ 0.43
CAPNS1-205ENST00000588780 SH3GL1Q99961 368 aa17.72■□□□□ 0.43
CAPNS1-205ENST00000588780 ADA2Q9NZK5 511 aa17.72■□□□□ 0.43
CAPNS1-205ENST00000588780 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.72■□□□□ 0.43
CAPNS1-205ENST00000588780 V9GYY5 206 aaPredicted RBP17.72■□□□□ 0.43
CAPNS1-205ENST00000588780 NKX6-3A6NJ46 265 aa17.71■□□□□ 0.43
CAPNS1-205ENST00000588780 H0YAE9 185 aa17.71■□□□□ 0.43
CAPNS1-205ENST00000588780 J3KTA2 159 aa17.71■□□□□ 0.43
CAPNS1-205ENST00000588780 M0R135 149 aa17.71■□□□□ 0.43
CAPNS1-205ENST00000588780 CHST1O43916 411 aa17.71■□□□□ 0.43
CAPNS1-205ENST00000588780 HLA-DQA2P01906 255 aa17.71■□□□□ 0.43
CAPNS1-205ENST00000588780 FAHP16930 419 aa17.71■□□□□ 0.43
CAPNS1-205ENST00000588780 MAGOHP61326 146 aaKnown RBP17.71■□□□□ 0.43
CAPNS1-205ENST00000588780 KRTAP27-1Q3LI81 207 aa17.71■□□□□ 0.43
CAPNS1-205ENST00000588780 NANOGP8Q6NSW7 305 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms