RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 PTTG3PQ9NZH4 202 aa9.77□□□□□ -0.85
VMP1-207ENST00000588131 STARD10Q9Y365 291 aa9.77□□□□□ -0.85
VMP1-207ENST00000588131 V9GYS6 101 aa9.77□□□□□ -0.85
VMP1-207ENST00000588131 IGSF10Q6WRI0 2623 aa9.77□□□□□ -0.85
VMP1-207ENST00000588131 MYO7BQ6PIF6 2116 aa9.76□□□□□ -0.85
VMP1-207ENST00000588131 TRAV8-7A0A075B6U6 113 aa9.76□□□□□ -0.85
VMP1-207ENST00000588131 A6NIN4 97 aa9.76□□□□□ -0.85
VMP1-207ENST00000588131 SMPD2O60906 423 aa9.76□□□□□ -0.85
VMP1-207ENST00000588131 ARL6IP5O75915 188 aa9.76□□□□□ -0.85
VMP1-207ENST00000588131 NCR1O76036 304 aa9.76□□□□□ -0.85
VMP1-207ENST00000588131 FAM157BP0CG42 384 aa9.76□□□□□ -0.85
VMP1-207ENST00000588131 ZNF35P13682 527 aa9.76□□□□□ -0.85
VMP1-207ENST00000588131 RPS19P39019 145 aaKnown RBP9.76□□□□□ -0.85
VMP1-207ENST00000588131 TNK1Q13470 666 aa9.76□□□□□ -0.85
VMP1-207ENST00000588131 SNTB1Q13884 538 aaKnown RBP9.76□□□□□ -0.85
VMP1-207ENST00000588131 C3orf36Q3SXR2 165 aa9.76□□□□□ -0.85
VMP1-207ENST00000588131 Q6ZSR3 168 aa9.76□□□□□ -0.85
VMP1-207ENST00000588131 WFDC8Q8IUA0 241 aa9.76□□□□□ -0.85
VMP1-207ENST00000588131 ITLN2Q8WWU7 325 aaPredicted RBP9.76□□□□□ -0.85
VMP1-207ENST00000588131 PHYHIPQ92561 330 aa9.76□□□□□ -0.85
VMP1-207ENST00000588131 SPSB4Q96A44 273 aa9.76□□□□□ -0.85
VMP1-207ENST00000588131 FGGYQ96C11 551 aa9.76□□□□□ -0.85
VMP1-207ENST00000588131 ADAT3Q96EY9 351 aaPredicted RBP9.76□□□□□ -0.85
VMP1-207ENST00000588131 WFIKKN1Q96NZ8 548 aa9.76□□□□□ -0.85
VMP1-207ENST00000588131 USB1Q9BQ65 265 aaKnown RBP9.76□□□□□ -0.85
VMP1-207ENST00000588131 KCNJ16Q9NPI9 418 aa9.76□□□□□ -0.85
VMP1-207ENST00000588131 ZNF275Q9NSD4 429 aaPredicted RBP9.76□□□□□ -0.85
VMP1-207ENST00000588131 TAS2R4Q9NYW5 299 aa9.76□□□□□ -0.85
VMP1-207ENST00000588131 IGHV2OR16-5A0A0B4J2B6 119 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 hCG_38984A0A1B0GV85 526 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 PYCARD-AS1I3L0S3 204 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 XRCC2O43543 280 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 ICMTO60725 284 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 IL1AP01583 271 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 MYL9P24844 172 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 ACKR3P25106 362 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 MAPK3P27361 379 aaPredicted RBP9.75□□□□□ -0.85
VMP1-207ENST00000588131 MTNR1BP49286 362 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 CAV3P56539 151 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 ERVS71-1P61550 626 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 FAM3AP98173 230 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 NAAAQ02083 359 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 TFF3Q07654 80 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 SPOCK1Q08629 439 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 GK2Q14410 553 aaPredicted RBP9.75□□□□□ -0.85
VMP1-207ENST00000588131 HLXQ14774 488 aaPredicted RBP9.75□□□□□ -0.85
VMP1-207ENST00000588131 C1QTNF12Q5T7M4 302 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 LRRTM1Q86UE6 522 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 NR2C2APQ86WQ0 139 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 SLC30A2Q9BRI3 323 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 MED18Q9BUE0 208 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 BARHL1Q9BZE3 327 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 RGCCQ9H4X1 137 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 MOV10Q9HCE1 1003 aaKnown RBP9.75□□□□□ -0.85
VMP1-207ENST00000588131 SNTG1Q9NSN8 517 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 TBCCD1Q9NVR7 557 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 PTTG2Q9NZH5 202 aa9.75□□□□□ -0.85
VMP1-207ENST00000588131 TRAV1-2A0A0B4J238 106 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 A0A0G2JK05 382 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 LOC390937A0A1W2PQ73 354 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 CASKO14936 926 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 DHRS3O75911 302 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 CLDN14O95500 239 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 RAF1P04049 648 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 CD2P06729 351 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 PPP3CBP16298 524 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 IGFBP3P17936 291 aaPredicted RBP9.74□□□□□ -0.85
VMP1-207ENST00000588131 ADRA2CP18825 462 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 SRMP19623 302 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 FSTP19883 344 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 PAX7P23759 505 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 GSK3AP49840 483 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 UCP2P55851 309 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 OR10A3P58181 314 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 PPP1CBP62140 327 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 MALLQ13021 153 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 CEP78Q5JTW2 689 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 SPATA46Q5T0L3 261 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 ZNF808Q8N4W9 903 aaPredicted RBP9.74□□□□□ -0.85
VMP1-207ENST00000588131 PARP16Q8N5Y8 322 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 OR1J1Q8NGS3 322 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 LINC01560Q8TB33 94 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 AKAP1Q92667 903 aaKnown RBP eCLIP9.74□□□□□ -0.85
VMP1-207ENST00000588131 THRSPQ92748 146 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 GFI1Q99684 422 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 TPK1Q9H3S4 243 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 TCF7L1Q9HCS4 588 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 CRIM1Q9NZV1 1036 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 EIF3KQ9UBQ5 218 aaKnown RBP9.74□□□□□ -0.85
VMP1-207ENST00000588131 ZNF391Q9UJN7 358 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 AK6Q9Y3D8 172 aaKnown RBP9.74□□□□□ -0.85
VMP1-207ENST00000588131 PMF1-BGLAPU3KQ54 211 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 ESPL1Q14674 2120 aa9.74□□□□□ -0.85
VMP1-207ENST00000588131 DPRXA6NFQ7 191 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 J3QW42 95 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 MAS1P04201 325 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 FAHP16930 419 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 ZNF12P17014 697 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 ZNF20P17024 532 aa9.73□□□□□ -0.85
VMP1-207ENST00000588131 AGAP20933 346 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms