RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 SAMD12Q8N8I0 201 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 Q8NA96 180 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 KDF1Q8NAX2 398 aaPredicted RBP5.4□□□□□ -1.54
LIG3-206ENST00000586058 CSNK2A3Q8NEV1 391 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 SLC30A7Q8NEW0 376 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 SEMA6DQ8NFY4 1073 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 OR1M1Q8NGA1 313 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 OR51A4Q8NGJ6 313 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 ASB5Q8WWX0 329 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 RGP1Q92546 391 aaPredicted RBP5.4□□□□□ -1.54
LIG3-206ENST00000586058 CMTM3Q96MX0 182 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 WDFY2Q96P53 400 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 VKORC1Q9BQB6 163 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 CCDC32Q9BV29 185 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 NXF2Q9GZY0 626 aaKnown RBP5.4□□□□□ -1.54
LIG3-206ENST00000586058 WNT5BQ9H1J7 359 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 OPN3Q9H1Y3 402 aaPredicted RBP5.4□□□□□ -1.54
LIG3-206ENST00000586058 HEATR1Q9H583 2144 aaKnown RBP5.4□□□□□ -1.54
LIG3-206ENST00000586058 ZCCHC4Q9H5U6 513 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 ABCB9Q9NP78 766 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 TMEM138Q9NPI0 162 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 SLC17A5Q9NRA2 495 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 ZNF275Q9NSD4 429 aaPredicted RBP5.4□□□□□ -1.54
LIG3-206ENST00000586058 ELOVL5Q9NYP7 299 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 TAS2R4Q9NYW5 299 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 ZNF629Q9UEG4 869 aaPredicted RBP5.4□□□□□ -1.54
LIG3-206ENST00000586058 STEAP1Q9UHE8 339 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 SLC7A11Q9UPY5 501 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 PIGLQ9Y2B2 252 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 AK6Q9Y3D8 172 aaKnown RBP5.4□□□□□ -1.54
LIG3-206ENST00000586058 SPEF1Q9Y4P9 236 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 FAM215AQ9Y5M1 114 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 SVILO95425 2214 aa5.4□□□□□ -1.55
LIG3-206ENST00000586058 A0A0C4DFX4 3053 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 TRBV5-7A0A0A0MS05 114 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 ZNF816-ZNF321PA0A0X1KG74 233 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 METTL21EPA6NDL7 271 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 FABP12A6NFH5 140 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 IFITM5A6NNB3 132 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 ANKRD30BLA7E2S9 258 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 SLC17A2O00624 439 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 TNFSF13O75888 250 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 CYB5AP00167 134 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 DBHP09172 617 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 CLEC2LP0C7M8 214 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 PATE4P0C8F1 98 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 UBBP0CG47 229 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 GLI4P10075 376 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 EPXP11678 715 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 ARSBP15848 533 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 SELEP16581 610 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 PRKACBP22694 351 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 TUBG1P23258 451 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 CEACAM8P31997 349 aaPredicted RBP5.39□□□□□ -1.55
LIG3-206ENST00000586058 NTF4P34130 210 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 ZNF93P35789 620 aaPredicted RBP5.39□□□□□ -1.55
LIG3-206ENST00000586058 RAD52P43351 418 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 NR4A2P43354 598 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 IDH3GP51553 393 aaPredicted RBP5.39□□□□□ -1.55
LIG3-206ENST00000586058 RPS23P62266 143 aaKnown RBP5.39□□□□□ -1.55
LIG3-206ENST00000586058 SPOCK1Q08629 439 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 PMPCAQ10713 525 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 GABRA6Q16445 453 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 ZNF181Q2M3W8 571 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 PYDC2Q56P42 97 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 TIMM23BQ5SRD1 257 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 ZBTB37Q5TC79 503 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 AWAT2Q6E213 333 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 XKRXQ6PP77 449 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 C3P1Q6ZMU1 363 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 BTLAQ7Z6A9 289 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 MDP1Q86V88 176 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 LIX1LQ8IVB5 337 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 LAX1Q8IWV1 398 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 CDH26Q8IXH8 852 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 RDH10Q8IZV5 341 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 ZNF610Q8N9Z0 462 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 OR13C9Q8NGT0 318 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 LGALS14Q8TCE9 139 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 RAB40AQ8WXH6 277 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 BCL2L2Q92843 193 aaPredicted RBP5.39□□□□□ -1.55
LIG3-206ENST00000586058 SPSB1Q96BD6 273 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 FGGYQ96C11 551 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 BORCS8Q96FH0 119 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 S100A16Q96FQ6 103 aaKnown RBP5.39□□□□□ -1.55
LIG3-206ENST00000586058 WBP1Q96G27 269 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 HIST1H2AAQ96QV6 131 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 UQCC2Q9BRT2 126 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 CHST5Q9GZS9 411 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 CST11Q9H112 138 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 METTL17Q9H7H0 456 aaPredicted RBP5.39□□□□□ -1.55
LIG3-206ENST00000586058 LIN7BQ9HAP6 207 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 NGBQ9NPG2 151 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 AKIP1Q9NQ31 210 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 DIABLOQ9NR28 239 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 TUBG2Q9NRH3 451 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 PCDHB16Q9NRJ7 776 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 EXTL2Q9UBQ6 330 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 TINAGQ9UJW2 476 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 SPATA2Q9UM82 520 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms