RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 HACD2Q6Y1H2 254 aa11.93□□□□□ -0.5
SDF2-202ENST00000585428 Q6ZSV7 163 aa11.93□□□□□ -0.5
SDF2-202ENST00000585428 ZNF826PQ6ZT77 177 aa11.93□□□□□ -0.5
SDF2-202ENST00000585428 FAM90A1Q86YD7 464 aa11.93□□□□□ -0.5
SDF2-202ENST00000585428 C11orf53Q8IXP5 236 aa11.93□□□□□ -0.5
SDF2-202ENST00000585428 BOLLQ8N9W6 283 aaKnown RBP11.93□□□□□ -0.5
SDF2-202ENST00000585428 SPERTQ8NA61 448 aa11.93□□□□□ -0.5
SDF2-202ENST00000585428 LY6G5BQ8NDX9 201 aa11.93□□□□□ -0.5
SDF2-202ENST00000585428 ZNF799Q96GE5 643 aa11.93□□□□□ -0.5
SDF2-202ENST00000585428 KRTAP3-3Q9BYR6 98 aa11.93□□□□□ -0.5
SDF2-202ENST00000585428 KRTAP3-2Q9BYR7 98 aa11.93□□□□□ -0.5
SDF2-202ENST00000585428 KRCC1Q9NPI7 259 aaPredicted RBP11.93□□□□□ -0.5
SDF2-202ENST00000585428 C1orf123Q9NWV4 160 aa11.93□□□□□ -0.5
SDF2-202ENST00000585428 KCNG2Q9UJ96 466 aa11.93□□□□□ -0.5
SDF2-202ENST00000585428 SLC22A31A6NKX4 558 aa11.92□□□□□ -0.5
SDF2-202ENST00000585428 NDUFAB1O14561 156 aa11.92□□□□□ -0.5
SDF2-202ENST00000585428 OR10H3O60404 316 aa11.92□□□□□ -0.5
SDF2-202ENST00000585428 GRPP07492 148 aa11.92□□□□□ -0.5
SDF2-202ENST00000585428 SLC6A6P31641 620 aa11.92□□□□□ -0.5
SDF2-202ENST00000585428 POU4F2Q12837 409 aa11.92□□□□□ -0.5
SDF2-202ENST00000585428 CDONQ4KMG0 1287 aa11.92□□□□□ -0.5
SDF2-202ENST00000585428 FAM86B1Q8N7N1 296 aa11.92□□□□□ -0.5
SDF2-202ENST00000585428 NPRL2Q8WTW4 380 aa11.92□□□□□ -0.5
SDF2-202ENST00000585428 ZNRF4Q8WWF5 429 aa11.92□□□□□ -0.5
SDF2-202ENST00000585428 SPTSSAQ969W0 71 aa11.92□□□□□ -0.5
SDF2-202ENST00000585428 DMRTB1Q96MA1 342 aa11.92□□□□□ -0.5
SDF2-202ENST00000585428 PKP2Q99959 881 aa11.92□□□□□ -0.5
SDF2-202ENST00000585428 KCTD14Q9BQ13 255 aaPredicted RBP11.92□□□□□ -0.5
SDF2-202ENST00000585428 ADAT1Q9BUB4 502 aaKnown RBP11.92□□□□□ -0.5
SDF2-202ENST00000585428 IFT27Q9BW83 186 aa11.92□□□□□ -0.5
SDF2-202ENST00000585428 DPAGT1Q9H3H5 408 aa11.92□□□□□ -0.5
SDF2-202ENST00000585428 TCF7L1Q9HCS4 588 aa11.92□□□□□ -0.5
SDF2-202ENST00000585428 ABCD2Q9UBJ2 740 aa11.92□□□□□ -0.5
SDF2-202ENST00000585428 RPUSD1Q9UJJ7 312 aaKnown RBP11.92□□□□□ -0.5
SDF2-202ENST00000585428 KPTNQ9Y664 436 aa11.92□□□□□ -0.5
SDF2-202ENST00000585428 PRKDCP78527 4128 aaKnown RBP11.92□□□□□ -0.5
SDF2-202ENST00000585428 GGT3PA6NGU5 568 aa11.91□□□□□ -0.5
SDF2-202ENST00000585428 TSPAN9O75954 239 aa11.91□□□□□ -0.5
SDF2-202ENST00000585428 SASH3O75995 380 aa11.91□□□□□ -0.5
SDF2-202ENST00000585428 HLA-DQA2P01906 255 aa11.91□□□□□ -0.5
SDF2-202ENST00000585428 SEMG1P04279 462 aa11.91□□□□□ -0.5
SDF2-202ENST00000585428 SMIM11AP58511 58 aa11.91□□□□□ -0.5
SDF2-202ENST00000585428 KRT72Q14CN4 511 aa11.91□□□□□ -0.5
SDF2-202ENST00000585428 GLYATL3Q5SZD4 288 aa11.91□□□□□ -0.5
SDF2-202ENST00000585428 METAP1DQ6UB28 335 aaPredicted RBP11.91□□□□□ -0.5
SDF2-202ENST00000585428 DRAM2Q6UX65 266 aa11.91□□□□□ -0.5
SDF2-202ENST00000585428 GDPGP1Q6ZNW5 385 aa11.91□□□□□ -0.5
SDF2-202ENST00000585428 OR2AE1Q8NHA4 323 aa11.91□□□□□ -0.5
SDF2-202ENST00000585428 FANK1Q8TC84 345 aa11.91□□□□□ -0.5
SDF2-202ENST00000585428 SPSB4Q96A44 273 aa11.91□□□□□ -0.5
SDF2-202ENST00000585428 FN3KQ9H479 309 aa11.91□□□□□ -0.5
SDF2-202ENST00000585428 ADA2Q9NZK5 511 aa11.91□□□□□ -0.5
SDF2-202ENST00000585428 BHLHE40O14503 412 aa11.9□□□□□ -0.5
SDF2-202ENST00000585428 MUC1P15941 1255 aaPredicted RBP11.9□□□□□ -0.5
SDF2-202ENST00000585428 ZNF823P16415 610 aa11.9□□□□□ -0.5
SDF2-202ENST00000585428 NOS3P29474 1203 aa11.9□□□□□ -0.5
SDF2-202ENST00000585428 RPS27P42677 84 aaKnown RBP11.9□□□□□ -0.5
SDF2-202ENST00000585428 GSSP48637 474 aa11.9□□□□□ -0.5
SDF2-202ENST00000585428 MZT1Q08AG7 82 aa11.9□□□□□ -0.5
SDF2-202ENST00000585428 PCK2Q16822 640 aa11.9□□□□□ -0.5
SDF2-202ENST00000585428 SLC35F1Q5T1Q4 408 aa11.9□□□□□ -0.5
SDF2-202ENST00000585428 VMO1Q7Z5L0 202 aa11.9□□□□□ -0.5
SDF2-202ENST00000585428 PDZD9Q8IXQ8 264 aa11.9□□□□□ -0.5
SDF2-202ENST00000585428 FGFRL1Q8N441 504 aa11.9□□□□□ -0.5
SDF2-202ENST00000585428 SCCPDHQ8NBX0 429 aa11.9□□□□□ -0.5
SDF2-202ENST00000585428 SDR9C7Q8NEX9 313 aa11.9□□□□□ -0.5
SDF2-202ENST00000585428 UBE2FQ969M7 185 aa11.9□□□□□ -0.5
SDF2-202ENST00000585428 GORASP2Q9H8Y8 452 aa11.9□□□□□ -0.5
SDF2-202ENST00000585428 RNPEPL1Q9HAU8 725 aa11.9□□□□□ -0.5
SDF2-202ENST00000585428 C14orf119Q9NWQ9 140 aa11.9□□□□□ -0.5
SDF2-202ENST00000585428 SAMD4AQ9UPU9 718 aaKnown RBP11.9□□□□□ -0.5
SDF2-202ENST00000585428 NOTCH1P46531 2555 aa11.9□□□□□ -0.5
SDF2-202ENST00000585428 IGHV3OR15-7A0A075B7D8 119 aa11.89□□□□□ -0.51
SDF2-202ENST00000585428 ZNF816-ZNF321PA0A0X1KG74 233 aa11.89□□□□□ -0.51
SDF2-202ENST00000585428 A0A1B0GVI7 797 aa11.89□□□□□ -0.51
SDF2-202ENST00000585428 CCDC22O60826 627 aa11.89□□□□□ -0.51
SDF2-202ENST00000585428 GADD45GO95257 159 aa11.89□□□□□ -0.51
SDF2-202ENST00000585428 TSPAN15O95858 294 aa11.89□□□□□ -0.51
SDF2-202ENST00000585428 PSKH1P11801 424 aa11.89□□□□□ -0.51
SDF2-202ENST00000585428 H2AFXP16104 143 aaPredicted RBP11.89□□□□□ -0.51
SDF2-202ENST00000585428 DDOSTP39656 456 aa11.89□□□□□ -0.51
SDF2-202ENST00000585428 TGM4P49221 684 aa11.89□□□□□ -0.51
SDF2-202ENST00000585428 ELF3P78545 371 aaPredicted RBP11.89□□□□□ -0.51
SDF2-202ENST00000585428 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.89□□□□□ -0.51
SDF2-202ENST00000585428 PYURFQ96I23 114 aa11.89□□□□□ -0.51
SDF2-202ENST00000585428 CCL13Q99616 98 aa11.89□□□□□ -0.51
SDF2-202ENST00000585428 FAM96BQ9Y3D0 163 aa11.89□□□□□ -0.51
SDF2-202ENST00000585428 WNK1Q9H4A3 2382 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.88□□□□□ -0.51
SDF2-202ENST00000585428 A0A1B0GW55 424 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 TVP23AA6NH52 213 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.88□□□□□ -0.51
SDF2-202ENST00000585428 DUX4L2P0CJ85 424 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 DUX4L3P0CJ86 424 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 DUX4L4P0CJ87 422 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 DUX4L5P0CJ88 424 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 DUX4L6P0CJ89 424 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 DUX4L7P0CJ90 424 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 AMY2BP19961 511 aa11.88□□□□□ -0.51
SDF2-202ENST00000585428 PYCR1P32322 319 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms