RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 TBC1D15Q8TC07 691 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 GNPDA2Q8TDQ7 276 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 SSMEM1Q8WWF3 244 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 GATAD2BQ8WXI9 593 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 ZNF799Q96GE5 643 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 MAP6Q96JE9 813 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 LRGUKQ96M69 825 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 WDFY2Q96P53 400 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 TRIM15Q9C019 465 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 UFSP2Q9NUQ7 469 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 TAS2R1Q9NYW7 299 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 V9GYQ6 96 aa12.46□□□□□ -0.41
VAPA-209ENST00000585042 CENPVL3A0A0U1RRI6 287 aa12.45□□□□□ -0.42
VAPA-209ENST00000585042 MDFIC2A0A1B0GVS7 189 aa12.45□□□□□ -0.42
VAPA-209ENST00000585042 C22orf46C9J442 243 aa12.45□□□□□ -0.42
VAPA-209ENST00000585042 OR10H3O60404 316 aa12.45□□□□□ -0.42
VAPA-209ENST00000585042 OMGP23515 440 aa12.45□□□□□ -0.42
VAPA-209ENST00000585042 DDOSTP39656 456 aa12.45□□□□□ -0.42
VAPA-209ENST00000585042 RAG2P55895 527 aa12.45□□□□□ -0.42
VAPA-209ENST00000585042 DEFA6Q01524 100 aa12.45□□□□□ -0.42
VAPA-209ENST00000585042 ZNF92Q03936 586 aa12.45□□□□□ -0.42
VAPA-209ENST00000585042 PRAMEF6Q5VXH4 476 aa12.45□□□□□ -0.42
VAPA-209ENST00000585042 OLFML2AQ68BL7 652 aa12.45□□□□□ -0.42
VAPA-209ENST00000585042 FIP1L1Q6UN15 594 aaKnown RBP12.45□□□□□ -0.42
VAPA-209ENST00000585042 ZNF620Q6ZNG0 422 aa12.45□□□□□ -0.42
VAPA-209ENST00000585042 LINC00471Q8N535 108 aa12.45□□□□□ -0.42
VAPA-209ENST00000585042 FAM86B1Q8N7N1 296 aa12.45□□□□□ -0.42
VAPA-209ENST00000585042 WFDC12Q8WWY7 111 aa12.45□□□□□ -0.42
VAPA-209ENST00000585042 DYRK2Q92630 601 aa12.45□□□□□ -0.42
VAPA-209ENST00000585042 TECTBQ96PL2 329 aa12.45□□□□□ -0.42
VAPA-209ENST00000585042 DDOQ99489 341 aa12.45□□□□□ -0.42
VAPA-209ENST00000585042 PCGF1Q9BSM1 259 aa12.45□□□□□ -0.42
VAPA-209ENST00000585042 IL1RAPQ9NPH3 570 aa12.45□□□□□ -0.42
VAPA-209ENST00000585042 ACOXLQ9NUZ1 547 aa12.45□□□□□ -0.42
VAPA-209ENST00000585042 C14orf119Q9NWQ9 140 aa12.45□□□□□ -0.42
VAPA-209ENST00000585042 MRPL22Q9NWU5 206 aaKnown RBP12.45□□□□□ -0.42
VAPA-209ENST00000585042 C1RLQ9NZP8 487 aa12.45□□□□□ -0.42
VAPA-209ENST00000585042 KAAG1Q9UBP8 84 aa12.45□□□□□ -0.42
VAPA-209ENST00000585042 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.44□□□□□ -0.42
VAPA-209ENST00000585042 CLPSL1A2RUU4 121 aa12.44□□□□□ -0.42
VAPA-209ENST00000585042 OOEPA6NGQ2 149 aa12.44□□□□□ -0.42
VAPA-209ENST00000585042 GGT3PA6NGU5 568 aa12.44□□□□□ -0.42
VAPA-209ENST00000585042 ADAM20O43506 726 aa12.44□□□□□ -0.42
VAPA-209ENST00000585042 ATP5HO75947 161 aa12.44□□□□□ -0.42
VAPA-209ENST00000585042 KRT36O76013 467 aa12.44□□□□□ -0.42
VAPA-209ENST00000585042 LHBP01229 141 aa12.44□□□□□ -0.42
VAPA-209ENST00000585042 MELTFP08582 738 aa12.44□□□□□ -0.42
VAPA-209ENST00000585042 HMGA2P52926 109 aa12.44□□□□□ -0.42
VAPA-209ENST00000585042 SPIBQ01892 262 aa12.44□□□□□ -0.42
VAPA-209ENST00000585042 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.44□□□□□ -0.423e-6■■■□□ 19
VAPA-209ENST00000585042 METTL11BQ5VVY1 283 aa12.44□□□□□ -0.42
VAPA-209ENST00000585042 CYP2R1Q6VVX0 501 aa12.44□□□□□ -0.42
VAPA-209ENST00000585042 KIR3DL3Q8N743 410 aa12.44□□□□□ -0.42
VAPA-209ENST00000585042 SDR9C7Q8NEX9 313 aa12.44□□□□□ -0.42
VAPA-209ENST00000585042 OR2T4Q8NH00 348 aa12.44□□□□□ -0.42
VAPA-209ENST00000585042 ASB9Q96DX5 294 aa12.44□□□□□ -0.42
VAPA-209ENST00000585042 TBX15Q96SF7 602 aa12.44□□□□□ -0.42
VAPA-209ENST00000585042 CITED1Q99966 193 aa12.44□□□□□ -0.42
VAPA-209ENST00000585042 THTPAQ9BU02 230 aa12.44□□□□□ -0.42
VAPA-209ENST00000585042 ADAT1Q9BUB4 502 aaKnown RBP12.44□□□□□ -0.42
VAPA-209ENST00000585042 CHIAQ9BZP6 476 aa12.44□□□□□ -0.42
VAPA-209ENST00000585042 MMADHCQ9H3L0 296 aaPredicted RBP12.44□□□□□ -0.42
VAPA-209ENST00000585042 CTSZQ9UBR2 303 aa12.44□□□□□ -0.42
VAPA-209ENST00000585042 TIMM23O14925 209 aa12.43□□□□□ -0.42
VAPA-209ENST00000585042 SFTPBP07988 381 aa12.43□□□□□ -0.42
VAPA-209ENST00000585042 HOXB6P17509 224 aaKnown RBP12.43□□□□□ -0.42
VAPA-209ENST00000585042 OR8B8Q15620 311 aa12.43□□□□□ -0.42
VAPA-209ENST00000585042 PCK2Q16822 640 aa12.43□□□□□ -0.42
VAPA-209ENST00000585042 SNAI3Q3KNW1 292 aa12.43□□□□□ -0.42
VAPA-209ENST00000585042 FAM98BQ52LJ0 330 aaKnown RBP12.43□□□□□ -0.42
VAPA-209ENST00000585042 TEX30Q5JUR7 227 aa12.43□□□□□ -0.42
VAPA-209ENST00000585042 TEX36Q5VZQ5 186 aa12.43□□□□□ -0.42
VAPA-209ENST00000585042 SFRP4Q6FHJ7 346 aaPredicted RBP12.43□□□□□ -0.42
VAPA-209ENST00000585042 LCN8Q6JVE9 175 aa12.43□□□□□ -0.42
VAPA-209ENST00000585042 ZDHHC21Q8IVQ6 265 aa12.43□□□□□ -0.42
VAPA-209ENST00000585042 C19orf18Q8NEA5 215 aa12.43□□□□□ -0.42
VAPA-209ENST00000585042 OR52L1Q8NGH7 329 aa12.43□□□□□ -0.42
VAPA-209ENST00000585042 NPRL2Q8WTW4 380 aa12.43□□□□□ -0.42
VAPA-209ENST00000585042 KCNJ15Q99712 375 aa12.43□□□□□ -0.42
VAPA-209ENST00000585042 BTBD10Q9BSF8 475 aa12.43□□□□□ -0.42
VAPA-209ENST00000585042 SIRPDQ9H106 197 aa12.43□□□□□ -0.42
VAPA-209ENST00000585042 MAGIXQ9H6Y5 334 aa12.43□□□□□ -0.42
VAPA-209ENST00000585042 SP140LQ9H930 580 aa12.43□□□□□ -0.42
VAPA-209ENST00000585042 RNPEPL1Q9HAU8 725 aa12.43□□□□□ -0.42
VAPA-209ENST00000585042 IL20Q9NYY1 176 aa12.43□□□□□ -0.42
VAPA-209ENST00000585042 IGHV1-69DA0A0B4J2H0 117 aa12.42□□□□□ -0.42
VAPA-209ENST00000585042 BHLHE40O14503 412 aa12.42□□□□□ -0.42
VAPA-209ENST00000585042 XRCC2O43543 280 aa12.42□□□□□ -0.42
VAPA-209ENST00000585042 IGHV1-69P01742 117 aa12.42□□□□□ -0.42
VAPA-209ENST00000585042 MUC1P15941 1255 aaPredicted RBP12.42□□□□□ -0.42
VAPA-209ENST00000585042 GRK5P34947 590 aa12.42□□□□□ -0.42
VAPA-209ENST00000585042 RELBQ01201 579 aa12.42□□□□□ -0.42
VAPA-209ENST00000585042 SLC35F1Q5T1Q4 408 aa12.42□□□□□ -0.42
VAPA-209ENST00000585042 LDLRAD3Q86YD5 345 aa12.42□□□□□ -0.42
VAPA-209ENST00000585042 GCSAMQ8N6F7 178 aa12.42□□□□□ -0.42
VAPA-209ENST00000585042 PROKR2Q8NFJ6 384 aa12.42□□□□□ -0.42
VAPA-209ENST00000585042 TAF15Q92804 592 aaKnown RBP eCLIP12.42□□□□□ -0.42
VAPA-209ENST00000585042 SPSB4Q96A44 273 aa12.42□□□□□ -0.42
VAPA-209ENST00000585042 CCDC124Q96CT7 223 aaKnown RBP12.42□□□□□ -0.42
VAPA-209ENST00000585042 CNTD2Q9H8S5 307 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms