RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 ARHGEF9O43307 516 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 TSPAN2O60636 221 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 FSTL3O95633 263 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 DBIP07108 87 aaKnown RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 BPGMP07738 259 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 H2BFMP0C1H6 154 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 NPIPA8P0DM63 369 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 IGHV4-38-2P0DP08 117 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 CPN1P15169 458 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 MAT2AP31153 395 aaKnown RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 TIMP3P35625 211 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 TAGLN2P37802 199 aaKnown RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 UQCRFS1P47985 274 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 CYB561P49447 251 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 MLF1P58340 268 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 TAS2R39P59534 338 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 RPS27AP62979 156 aaKnown RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 PUDPQ08623 228 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 ARL16Q0P5N6 197 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 TMEM187Q14656 261 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 LIN52Q52LA3 116 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 UNC50Q53HI1 259 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF678Q5SXM1 525 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 LCE1AQ5T7P2 110 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 C1orf185Q5T7R7 199 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 C9orf135Q5VTT2 229 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF544Q6NX49 715 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC48A1Q6P1K1 146 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 FIP1L1Q6UN15 594 aaKnown RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 TRPT1Q86TN4 253 aaKnown RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 RPS19BP1Q86WX3 136 aaKnown RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 LRRC75A-AS1Q8N1F1 130 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 LIX1Q8N485 282 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 ACOT4Q8N9L9 421 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF114Q8NC26 417 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 OR5T3Q8NGG3 340 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 OR8J1Q8NGP2 316 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 OR1K1Q8NGR3 316 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 OR1L3Q8NH93 324 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 FLVCR1-AS1Q8TAF5 88 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 ADAMTS16Q8TE57 1224 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 RPL3LQ92901 407 aaKnown RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 ATP6V1G3Q96LB4 118 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 IMMP1LQ96LU5 166 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 RILPQ96NA2 401 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 ALKBH3Q96Q83 286 aaPredicted RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 ST6GALNAC5Q9BVH7 336 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 COMMD4Q9H0A8 199 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 RBKSQ9H477 322 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 SAR1AQ9NR31 198 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 UFSP2Q9NUQ7 469 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 PCTPQ9UKL6 214 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 NPIPA1Q9UND3 350 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 TRAPPC4Q9Y296 219 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 PPIAL4AQ9Y536 164 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 DOPEY1Q5JWR5 2465 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 A0A0A6YYD5 115 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 IGHV4-61A0A0C4DH41 118 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 A0A1B0GUV1 79 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 OR51F1A6NGY5 319 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 TRIM49D1C9J1S8 452 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 H0YGG7 62 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 GOLGA8RI6L899 631 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 IDH3BO43837 385 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 IGHV4-59P01825 116 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 HPNP05981 417 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 UQCRHP07919 91 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 ERCC1P07992 297 aaPredicted RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 PGCP20142 388 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 SOX3P41225 446 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 GPM6AP51674 278 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 DSCR4P56555 118 aaPredicted RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 RPS23P62266 143 aaKnown RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 MS4A2Q01362 244 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 ARFRP1Q13795 201 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 GRB7Q14451 532 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 TAB1Q15750 504 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 KIAA1644Q3SXP7 199 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 DNAL1Q4LDG9 190 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 ACSBG2Q5FVE4 666 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 ANKRD26P1Q6NSI1 321 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 DNM1P34Q6PK57 102 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 DHRS4L2Q6PKH6 230 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 C6orf89Q6UWU4 347 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 MARCH9Q86YJ5 346 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 CA13Q8N1Q1 262 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 GPR137CQ8N3F9 429 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 OR5AU1Q8NGC0 362 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 PIGXQ8TBF5 258 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF75CPQ92670 426 aaPredicted RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 PPCDCQ96CD2 204 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 TLCD1Q96CP7 247 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 MS4A6EQ96DS6 147 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 RAB3CQ96E17 227 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 CCDC115Q96NT0 180 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 TRNT1Q96Q11 434 aaKnown RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC6A7Q99884 636 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 ANGPTL4Q9BY76 406 aa1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 MRPL13Q9BYD1 178 aaKnown RBP1.62□□□□□ -2.15
SMCHD1-211ENST00000584897 PIGUQ9H490 435 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 847.2 ms