RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 PCK2Q16822 640 aa11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 ZMAT1Q5H9K5 638 aa11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 NCMAPQ5T1S8 102 aa11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 ZNF684Q5T5D7 378 aa11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 LRRC18Q8N456 261 aa11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 RPS4Y2Q8TD47 263 aa11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 ZNRF4Q8WWF5 429 aa11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 SLC30A2Q9BRI3 323 aa11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 CLEC4MQ9H2X3 399 aaPredicted RBP11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 TPK1Q9H3S4 243 aa11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 RNF167Q9H6Y7 350 aa11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 NPAP1Q9NZP6 1156 aa11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 MRM2Q9UI43 246 aaKnown RBP11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 RNF115Q9Y4L5 304 aa11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 ROS1P08922 2347 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 ISPDA4D126 451 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 RPP14O95059 124 aaKnown RBP11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 APOC1P02654 83 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 UCHL1P09936 223 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 H2BFMP0C1H6 154 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 FOSL1P15407 271 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 RAB3BP20337 219 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 CD40P25942 277 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 PTBP1P26599 531 aaKnown RBP eCLIP11.69□□□□□ -0.546e-8■■■■■ 32.4
CSNK1D-220ENST00000581737 IDH3GP51553 393 aaPredicted RBP11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 HCCSP53701 268 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 DEFA1P59665 94 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 DEFA3P59666 94 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 BSPH1Q075Z2 132 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 DOC2BQ14184 412 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 ENDOGQ14249 297 aaKnown RBP11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 TAF13Q15543 124 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 MEP1BQ16820 701 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 ZNF181Q2M3W8 571 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 RGS21Q2M5E4 152 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 Q499Y3 187 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 ZNF704Q6ZNC4 412 aaPredicted RBP11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 KRTAP1-3Q8IUG1 177 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 GPR148Q8TDV2 347 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 C11orf40Q8WZ69 217 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 HTRA1Q92743 480 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 TRMT61AQ96FX7 289 aaKnown RBP11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 ABHD6Q9BV23 337 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 CCDC32Q9BV29 185 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 ZNF416Q9BWM5 594 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 C1QTNF6Q9BXI9 259 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 ELOVL3Q9HB03 270 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 EMC7Q9NPA0 242 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 MRPL22Q9NWU5 206 aaKnown RBP11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 ZNF224Q9NZL3 707 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 RABL2AQ9UBK7 228 aaPredicted RBP11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 RABL2BQ9UNT1 228 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 GRIP1Q9Y3R0 1128 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 TIMM10BQ9Y5J6 103 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 PMF1-BGLAPU3KQ54 211 aa11.69□□□□□ -0.54
CSNK1D-220ENST00000581737 NSD1Q96L73 2696 aaPredicted RBP11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 CUBNO60494 3623 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 AKAP6Q13023 2319 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 IGHV1-18A0A0C4DH31 117 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 ZNF503-AS2A6NEH8 195 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 DPRXA6NFQ7 191 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 ZNF878C9JN71 531 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 E9PI62 339 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 ABCD4O14678 606 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 SIAH2O43255 324 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 SC5DO75845 299 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 ABHD16AO95870 558 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 CRYAAP02489 173 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 SERPINA5P05154 406 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 MMP7P09237 267 aaPredicted RBP11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 CECR9P0C854 216 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 UBCP0CG48 685 aaKnown RBP11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 BMP4P12644 408 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 ZNF32P17041 273 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 TALDO1P37837 337 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 PSMB10P40306 273 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 METAP1DQ6UB28 335 aaPredicted RBP11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 LYPD4Q6UWN0 246 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 LRRN1Q6UXK5 716 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 TMEM91Q6ZNR0 172 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 DCXRQ7Z4W1 244 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 RFLNBQ8N5W9 214 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 OR1J2Q8NGS2 313 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 OR2G2Q8NGZ5 317 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 TSEN15Q8WW01 171 aaKnown RBP11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 FBXO17Q96EF6 278 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 C4orf45Q96LM5 186 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 FOXN4Q96NZ1 517 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 TMEM204Q9BSN7 226 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 TCF7L1Q9HCS4 588 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 CKLFQ9UBR5 152 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 SIRT4Q9Y6E7 314 aaPredicted RBP11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 R4GMQ9 66 aa11.68□□□□□ -0.54
CSNK1D-220ENST00000581737 FN1P02751 2386 aaKnown RBP11.67□□□□□ -0.54
CSNK1D-220ENST00000581737 PATE4P0C8F1 98 aa11.67□□□□□ -0.54
CSNK1D-220ENST00000581737 OCM2P0CE71 109 aa11.67□□□□□ -0.54
CSNK1D-220ENST00000581737 ZNF14P17017 642 aaPredicted RBP11.67□□□□□ -0.54
CSNK1D-220ENST00000581737 DNASE1P24855 282 aa11.67□□□□□ -0.54
CSNK1D-220ENST00000581737 HSD11B1P28845 292 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms