RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 UNQ9370/PRO34162Q6UXP9 181 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 MRPL21Q7Z2W9 205 aaKnown RBP9.26□□□□□ -0.93
SS18-213ENST00000579640 OR1J1Q8NGS3 322 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 FAM222BQ8WU58 562 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 TSEN15Q8WW01 171 aaKnown RBP9.26□□□□□ -0.93
SS18-213ENST00000579640 C10orf35Q96D05 121 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 CHCHD6Q9BRQ6 235 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 REPIN1Q9BWE0 567 aaKnown RBP9.26□□□□□ -0.93
SS18-213ENST00000579640 OR51E2Q9H255 320 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 EXOSC4Q9NPD3 245 aaKnown RBP9.26□□□□□ -0.93
SS18-213ENST00000579640 CEPT1Q9Y6K0 416 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 MYO18BQ8IUG5 2567 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 hCG_38984A0A1B0GV85 526 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 CLEC18AA5D8T8 446 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 C5orf63A6NC05 138 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 ARL6IP5O75915 188 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 FAM157BP0CG42 384 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 ANOS1P23352 680 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 GLRXP35754 106 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 ZNF92Q03936 586 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 BSPH1Q075Z2 132 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 ZMAT1Q5H9K5 638 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 CLEC18BQ6UXF7 455 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 FBXW12Q6X9E4 464 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 TMEM91Q6ZNR0 172 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 SLC16A12Q6ZSM3 486 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 PGAP1Q75T13 922 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 CEACAM19Q7Z692 300 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 DMRTC2Q8IXT2 367 aaPredicted RBP9.26□□□□□ -0.93
SS18-213ENST00000579640 CLEC18CQ8NCF0 446 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 NUP37Q8NFH4 326 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 OR13C3Q8NGS6 347 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 OR13C5Q8NGS8 318 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 OR14K1Q8NGZ2 314 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 OR10AC1Q8NH08 325 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 OR2AE1Q8NHA4 323 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 FAM71F1Q96KD3 344 aaPredicted RBP9.26□□□□□ -0.93
SS18-213ENST00000579640 LYZL4Q96KX0 146 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 RBM38Q9H0Z9 239 aaKnown RBP9.26□□□□□ -0.93
SS18-213ENST00000579640 TXNL4BQ9NX01 149 aaKnown RBP9.26□□□□□ -0.93
SS18-213ENST00000579640 PTTG3PQ9NZH4 202 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 V9GYS6 101 aa9.26□□□□□ -0.93
SS18-213ENST00000579640 PRR14LQ5THK1 2151 aa9.25□□□□□ -0.93
SS18-213ENST00000579640 HEATR1Q9H583 2144 aaKnown RBP9.25□□□□□ -0.93
SS18-213ENST00000579640 LOC100506127A0A0U1RQW1 187 aa9.25□□□□□ -0.93
SS18-213ENST00000579640 CCDC160A6NGH7 325 aa9.25□□□□□ -0.93
SS18-213ENST00000579640 ATP6V1G2-DDX39BF2Z307 99 aa9.25□□□□□ -0.93
SS18-213ENST00000579640 ABCD4O14678 606 aa9.25□□□□□ -0.93
SS18-213ENST00000579640 CD3EP07766 207 aa9.25□□□□□ -0.93
SS18-213ENST00000579640 RAC2P15153 192 aa9.25□□□□□ -0.93
SS18-213ENST00000579640 SELEP16581 610 aa9.25□□□□□ -0.93
SS18-213ENST00000579640 DDOSTP39656 456 aa9.25□□□□□ -0.93
SS18-213ENST00000579640 MAP2K3P46734 347 aa9.25□□□□□ -0.93
SS18-213ENST00000579640 NKX6-1P78426 367 aaPredicted RBP9.25□□□□□ -0.93
SS18-213ENST00000579640 FAM3AP98173 230 aa9.25□□□□□ -0.93
SS18-213ENST00000579640 SRSF1Q07955 248 aaKnown RBP eCLIP9.25□□□□□ -0.93
SS18-213ENST00000579640 SNTB2Q13425 540 aaKnown RBP9.25□□□□□ -0.93
SS18-213ENST00000579640 SNTB1Q13884 538 aaKnown RBP9.25□□□□□ -0.93
SS18-213ENST00000579640 GK2Q14410 553 aaPredicted RBP9.25□□□□□ -0.93
SS18-213ENST00000579640 OR8B8Q15620 311 aa9.25□□□□□ -0.93
SS18-213ENST00000579640 ZNF718Q3SXZ3 478 aa9.25□□□□□ -0.93
SS18-213ENST00000579640 ZBTB37Q5TC79 503 aa9.25□□□□□ -0.93
SS18-213ENST00000579640 OR51A4Q8NGJ6 313 aa9.25□□□□□ -0.93
SS18-213ENST00000579640 SLC25A40Q8TBP6 338 aa9.25□□□□□ -0.93
SS18-213ENST00000579640 TMEM106AQ96A25 262 aa9.25□□□□□ -0.93
SS18-213ENST00000579640 ISOC1Q96CN7 298 aa9.25□□□□□ -0.93
SS18-213ENST00000579640 DGCR14Q96DF8 476 aaKnown RBP9.25□□□□□ -0.93
SS18-213ENST00000579640 PLPPR2Q96GM1 343 aa9.25□□□□□ -0.93
SS18-213ENST00000579640 KCTD7Q96MP8 289 aa9.25□□□□□ -0.93
SS18-213ENST00000579640 DERL3Q96Q80 235 aa9.25□□□□□ -0.93
SS18-213ENST00000579640 OR14A2Q96R54 314 aa9.25□□□□□ -0.93
SS18-213ENST00000579640 OR51B6Q9H340 312 aa9.25□□□□□ -0.93
SS18-213ENST00000579640 PLEKHA1Q9HB21 404 aa9.25□□□□□ -0.93
SS18-213ENST00000579640 ZNF275Q9NSD4 429 aaPredicted RBP9.25□□□□□ -0.93
SS18-213ENST00000579640 RSL24D1Q9UHA3 163 aaKnown RBP9.25□□□□□ -0.93
SS18-213ENST00000579640 FASNP49327 2511 aaKnown RBP9.25□□□□□ -0.93
SS18-213ENST00000579640 HELZ2Q9BYK8 2649 aaKnown RBP9.24□□□□□ -0.93
SS18-213ENST00000579640 TRBV5-7A0A0A0MS05 114 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.24□□□□□ -0.93
SS18-213ENST00000579640 GOSR1O95249 250 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 UCHL1P09936 223 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 SOX2P48431 317 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 GSK3AP49840 483 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 RIPPLY1Q0D2K3 151 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 CTF1Q16619 201 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 MBNL2Q5VZF2 373 aaKnown RBP9.24□□□□□ -0.93
SS18-213ENST00000579640 C22orf42Q6IC83 251 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 RGS7BPQ6MZT1 257 aaPredicted RBP9.24□□□□□ -0.93
SS18-213ENST00000579640 SLC22A25Q6T423 547 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 FTMTQ8N4E7 242 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 PARP16Q8N5Y8 322 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 ACBD4Q8NC06 268 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 CSNK2A3Q8NEV1 391 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 SEMA6DQ8NFY4 1073 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 RPL3LQ92901 407 aaKnown RBP9.24□□□□□ -0.93
SS18-213ENST00000579640 TRMT61AQ96FX7 289 aaKnown RBP9.24□□□□□ -0.93
SS18-213ENST00000579640 MARS2Q96GW9 593 aaKnown RBP9.24□□□□□ -0.93
SS18-213ENST00000579640 OR2J1Q9GZK6 312 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 NAA50Q9GZZ1 169 aaKnown RBP9.24□□□□□ -0.93
SS18-213ENST00000579640 CRIM1Q9NZV1 1036 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms