RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 SF3A3Q12874 501 aaKnown RBP eCLIP10.72□□□□□ -0.691e-6■■□□□ 14.1
CDK5RAP3-213ENST00000579605 DUX4L9Q6RFH8 374 aaPredicted RBP10.72□□□□□ -0.69
CDK5RAP3-213ENST00000579605 ZNF730Q6ZMV8 503 aa10.72□□□□□ -0.69
CDK5RAP3-213ENST00000579605 MEPCEQ7L2J0 689 aaKnown RBP10.72□□□□□ -0.69
CDK5RAP3-213ENST00000579605 OFCC1Q8IZS5 231 aa10.72□□□□□ -0.69
CDK5RAP3-213ENST00000579605 Q8N7P7 452 aa10.72□□□□□ -0.69
CDK5RAP3-213ENST00000579605 OR13C2Q8NGS9 318 aa10.72□□□□□ -0.69
CDK5RAP3-213ENST00000579605 DPF1Q92782 380 aa10.72□□□□□ -0.69
CDK5RAP3-213ENST00000579605 ERGIC1Q969X5 290 aa10.72□□□□□ -0.69
CDK5RAP3-213ENST00000579605 RASD2Q96D21 266 aa10.72□□□□□ -0.69
CDK5RAP3-213ENST00000579605 NDEL1Q9GZM8 345 aa10.72□□□□□ -0.69
CDK5RAP3-213ENST00000579605 GRHPRQ9UBQ7 328 aa10.72□□□□□ -0.69
CDK5RAP3-213ENST00000579605 DUX4Q9UBX2 424 aa10.72□□□□□ -0.69
CDK5RAP3-213ENST00000579605 DNAH7Q8WXX0 4024 aa10.71□□□□□ -0.69
CDK5RAP3-213ENST00000579605 J3KTA2 159 aa10.71□□□□□ -0.69
CDK5RAP3-213ENST00000579605 CCDC159P0C7I6 412 aa10.71□□□□□ -0.69
CDK5RAP3-213ENST00000579605 RAD23AP54725 363 aa10.71□□□□□ -0.69
CDK5RAP3-213ENST00000579605 DCTN2Q13561 401 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-213ENST00000579605 LRRC75BQ2VPJ9 315 aa10.71□□□□□ -0.69
CDK5RAP3-213ENST00000579605 ARSJQ5FYB0 599 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-213ENST00000579605 CRIP3Q6Q6R5 217 aa10.71□□□□□ -0.69
CDK5RAP3-213ENST00000579605 RRM2BQ7LG56 351 aa10.71□□□□□ -0.69
CDK5RAP3-213ENST00000579605 RNF113BQ8IZP6 322 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-213ENST00000579605 DTX3Q8N9I9 347 aa10.71□□□□□ -0.69
CDK5RAP3-213ENST00000579605 LY6G5BQ8NDX9 201 aa10.71□□□□□ -0.69
CDK5RAP3-213ENST00000579605 ACOT11Q8WXI4 607 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-213ENST00000579605 MAP6Q96JE9 813 aa10.71□□□□□ -0.69
CDK5RAP3-213ENST00000579605 CCL13Q99616 98 aa10.71□□□□□ -0.69
CDK5RAP3-213ENST00000579605 VIPAS39Q9H9C1 493 aa10.71□□□□□ -0.69
CDK5RAP3-213ENST00000579605 PALMDQ9NP74 551 aa10.71□□□□□ -0.69
CDK5RAP3-213ENST00000579605 SAR1AQ9NR31 198 aa10.71□□□□□ -0.69
CDK5RAP3-213ENST00000579605 C1orf123Q9NWV4 160 aa10.71□□□□□ -0.69
CDK5RAP3-213ENST00000579605 AP3M1Q9Y2T2 418 aa10.71□□□□□ -0.69
CDK5RAP3-213ENST00000579605 CAPN7Q9Y6W3 813 aa10.71□□□□□ -0.69
CDK5RAP3-213ENST00000579605 TRBV23-1A0A0A0MS06 115 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 MEGF11A6BM72 1044 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 AHCYL1O43865 530 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 DUS4LO95620 317 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 CD14P08571 375 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 CD200P41217 278 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 GPR4P46093 362 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 UBE2E1P51965 193 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 FHL1Q13642 323 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 OR8G1Q15617 311 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 ZBED5Q49AG3 693 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 IFI44LQ53G44 452 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 ZNF826PQ6ZT77 177 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 CCDC121Q6ZUS5 278 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 MBOAT2Q6ZWT7 520 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 VTCN1Q7Z7D3 282 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 FAM90A1Q86YD7 464 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 CELF2-AS1Q8N7Q2 184 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 SDR9C7Q8NEX9 313 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 OR1F12Q8NHA8 337 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 C8orf46Q8TAG6 207 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 TNFRSF14Q92956 283 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 Q96M85 177 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 ZNF570Q96NI8 536 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 HCAR1Q9BXC0 346 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 TRIM36Q9NQ86 728 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 INPP5EQ9NRR6 644 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 ADAM18Q9Y3Q7 739 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 SNX13Q9Y5W8 968 aa10.7□□□□□ -0.7
CDK5RAP3-213ENST00000579605 A0A087WUU8 490 aa10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 TEX13CA0A0J9YWL9 993 aa10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 PRSS37A4D1T9 235 aa10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 FFAR1O14842 300 aa10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 GSTA4O15217 222 aa10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 KHDRBS3O75525 346 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 ZNF682O95780 498 aa10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 GRPP07492 148 aa10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 LYL1P12980 280 aa10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 CA6P23280 308 aa10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 RGS6P49758 472 aa10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 ACSM1Q08AH1 577 aa10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 ECH1Q13011 328 aa10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 IKZF1Q13422 519 aa10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 AQP6Q13520 282 aa10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 MESTQ5EB52 335 aa10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 NKAPLQ5M9Q1 402 aa10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 TBPL2Q6SJ96 375 aa10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 TMPRSS11FQ6ZWK6 438 aa10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 FKBP9P1Q75LS8 142 aa10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 ARPINQ7Z6K5 226 aa10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 CYP4Z1Q86W10 505 aa10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 FAM156AQ8NDB6 213 aa10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 H1FXQ92522 213 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 APOBEC3DQ96AK3 386 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 RCN3Q96D15 328 aa10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 RERGLQ9H628 205 aa10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 ARGLU1Q9NWB6 273 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-213ENST00000579605 hCG_1807616A0A1W2PRN6 198 aa10.68□□□□□ -0.7
CDK5RAP3-213ENST00000579605 CXCR6O00574 342 aa10.68□□□□□ -0.7
CDK5RAP3-213ENST00000579605 CDC42EP2O14613 210 aa10.68□□□□□ -0.7
CDK5RAP3-213ENST00000579605 SLC16A7O60669 478 aa10.68□□□□□ -0.7
CDK5RAP3-213ENST00000579605 CTLA4P16410 223 aa10.68□□□□□ -0.7
CDK5RAP3-213ENST00000579605 KRR1Q13601 381 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP3-213ENST00000579605 C11orf91Q3C1V1 193 aa10.68□□□□□ -0.7
CDK5RAP3-213ENST00000579605 CCDC92Q53HC0 331 aaPredicted RBP10.68□□□□□ -0.7
CDK5RAP3-213ENST00000579605 CBLL1Q75N03 491 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms